RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 ZFP30Q9Y2G7 519 aa8.16□□□□□ -1.1
CLDN11-205ENST00000480067 GOLT1BQ9Y3E0 138 aa8.16□□□□□ -1.1
CLDN11-205ENST00000480067 COL7A1Q02388 2944 aa8.16□□□□□ -1.1
CLDN11-205ENST00000480067 IGHV3OR16-12A0A075B7B8 117 aa8.15□□□□□ -1.1
CLDN11-205ENST00000480067 TRAV12-3A0A0B4J271 114 aa8.15□□□□□ -1.1
CLDN11-205ENST00000480067 TRBV6-1A0A0K0K1D8 114 aa8.15□□□□□ -1.1
CLDN11-205ENST00000480067 C7orf71A4D174 169 aa8.15□□□□□ -1.1
CLDN11-205ENST00000480067 Q86TA4 180 aa8.15□□□□□ -1.1
CLDN11-205ENST00000480067 BAGE2Q86Y30 109 aa8.15□□□□□ -1.1
CLDN11-205ENST00000480067 OVOL2Q9BRP0 275 aa8.15□□□□□ -1.1
CLDN11-205ENST00000480067 NIPSNAP3BQ9BS92 247 aa8.15□□□□□ -1.1
CLDN11-205ENST00000480067 DERL1Q9BUN8 251 aa8.15□□□□□ -1.1
CLDN11-205ENST00000480067 SMDT1Q9H4I9 107 aa8.15□□□□□ -1.1
CLDN11-205ENST00000480067 TP53TG1Q9Y2A0 90 aa8.15□□□□□ -1.1
CLDN11-205ENST00000480067 NDUFS6O75380 124 aaKnown RBP8.14□□□□□ -1.11
CLDN11-205ENST00000480067 LTAP01374 205 aa8.14□□□□□ -1.11
CLDN11-205ENST00000480067 TAS2R60P59551 318 aa8.14□□□□□ -1.11
CLDN11-205ENST00000480067 BTN1A1Q13410 526 aa8.14□□□□□ -1.11
CLDN11-205ENST00000480067 SMUG1Q53HV7 270 aa8.14□□□□□ -1.11
CLDN11-205ENST00000480067 OR11H2Q8NH07 326 aa8.14□□□□□ -1.11
CLDN11-205ENST00000480067 LINC01587Q99440 93 aa8.14□□□□□ -1.11
CLDN11-205ENST00000480067 C20orf144Q9BQM9 153 aa8.14□□□□□ -1.11
CLDN11-205ENST00000480067 RETNQ9HD89 108 aa8.14□□□□□ -1.11
CLDN11-205ENST00000480067 DNAH9Q9NYC9 4486 aa8.14□□□□□ -1.11
CLDN11-205ENST00000480067 RAB19A4D1S5 217 aa8.14□□□□□ -1.11
CLDN11-205ENST00000480067 GNG4P50150 75 aa8.14□□□□□ -1.11
CLDN11-205ENST00000480067 SRSF3P84103 164 aaKnown RBP8.14□□□□□ -1.11
CLDN11-205ENST00000480067 ZNF674Q2M3X9 581 aa8.14□□□□□ -1.11
CLDN11-205ENST00000480067 C1orf158Q8N1D5 194 aa8.14□□□□□ -1.11
CLDN11-205ENST00000480067 TMEM256Q8N2U0 113 aa8.14□□□□□ -1.11
CLDN11-205ENST00000480067 C8orf49Q96NF6 230 aa8.14□□□□□ -1.11
CLDN11-205ENST00000480067 H7BYZ3 331 aa8.13□□□□□ -1.11
CLDN11-205ENST00000480067 ZNF324O75467 553 aaPredicted RBP8.13□□□□□ -1.11
CLDN11-205ENST00000480067 GCGP01275 180 aa8.13□□□□□ -1.11
CLDN11-205ENST00000480067 SRP19P09132 144 aaKnown RBP8.13□□□□□ -1.11
CLDN11-205ENST00000480067 HTN1P15515 57 aa8.13□□□□□ -1.11
CLDN11-205ENST00000480067 CENPWQ5EE01 88 aa8.13□□□□□ -1.11
CLDN11-205ENST00000480067 PRR9Q5T870 116 aa8.13□□□□□ -1.11
CLDN11-205ENST00000480067 ZNF705AQ6ZN79 300 aaPredicted RBP8.13□□□□□ -1.11
CLDN11-205ENST00000480067 TMEM183AQ8IXX5 376 aa8.13□□□□□ -1.11
CLDN11-205ENST00000480067 TGP01266 2768 aa8.12□□□□□ -1.11
CLDN11-205ENST00000480067 TRAV21A0A0B4J279 112 aa8.12□□□□□ -1.11
CLDN11-205ENST00000480067 C9JQL5 133 aa8.12□□□□□ -1.11
CLDN11-205ENST00000480067 RBMY1A1P0DJD3 496 aaKnown RBP8.12□□□□□ -1.11
CLDN11-205ENST00000480067 RBMY1CP0DJD4 496 aa8.12□□□□□ -1.11
CLDN11-205ENST00000480067 RBMY1FQ15415 496 aaKnown RBP8.12□□□□□ -1.11
CLDN11-205ENST00000480067 Q6AWC8 147 aa8.12□□□□□ -1.11
CLDN11-205ENST00000480067 NHLRC2Q8NBF2 726 aa8.12□□□□□ -1.11
CLDN11-205ENST00000480067 PARLQ9H300 379 aa8.12□□□□□ -1.11
CLDN11-205ENST00000480067 SMIM9A6NGZ8 99 aa8.11□□□□□ -1.11
CLDN11-205ENST00000480067 FABP5P3A8MUU1 101 aa8.11□□□□□ -1.11
CLDN11-205ENST00000480067 PFN1P07737 140 aaKnown RBP8.11□□□□□ -1.11
CLDN11-205ENST00000480067 Q6ZQT7 251 aa8.11□□□□□ -1.11
CLDN11-205ENST00000480067 COX8CQ7Z4L0 72 aa8.11□□□□□ -1.11
CLDN11-205ENST00000480067 ZC2HC1AQ96GY0 325 aa8.11□□□□□ -1.11
CLDN11-205ENST00000480067 PYGO2Q9BRQ0 406 aa8.11□□□□□ -1.11
CLDN11-205ENST00000480067 MLST8Q9BVC4 326 aa8.11□□□□□ -1.11
CLDN11-205ENST00000480067 ZNF727A8MUV8 499 aa8.1□□□□□ -1.11
CLDN11-205ENST00000480067 ZNF705GA8MUZ8 300 aaPredicted RBP8.1□□□□□ -1.11
CLDN11-205ENST00000480067 MGST1P10620 155 aaKnown RBP8.1□□□□□ -1.11
CLDN11-205ENST00000480067 MIFP14174 115 aa8.1□□□□□ -1.11
CLDN11-205ENST00000480067 ZNF80P51504 273 aaPredicted RBP8.1□□□□□ -1.11
CLDN11-205ENST00000480067 RRN3P1Q2M238 152 aa8.1□□□□□ -1.11
CLDN11-205ENST00000480067 SOHLH1Q5JUK2 328 aa8.1□□□□□ -1.11
CLDN11-205ENST00000480067 FAM162BQ5T6X4 162 aa8.1□□□□□ -1.11
CLDN11-205ENST00000480067 FAM159AQ6UWV7 190 aa8.1□□□□□ -1.11
CLDN11-205ENST00000480067 SMIM12Q96EX1 92 aa8.1□□□□□ -1.11
CLDN11-205ENST00000480067 NEU1Q99519 415 aa8.1□□□□□ -1.11
CLDN11-205ENST00000480067 SMIM7Q9BQ49 75 aa8.1□□□□□ -1.11
CLDN11-205ENST00000480067 NAGKQ9UJ70 344 aa8.1□□□□□ -1.11
CLDN11-205ENST00000480067 X6R8D5 127 aa8.1□□□□□ -1.11
CLDN11-205ENST00000480067 TENM3Q9P273 2699 aa8.1□□□□□ -1.11
CLDN11-205ENST00000480067 HUWE1Q7Z6Z7 4374 aaKnown RBP8.1□□□□□ -1.11
CLDN11-205ENST00000480067 TRBV20OR9-2A0A075B6H5 130 aa8.1□□□□□ -1.11
CLDN11-205ENST00000480067 LINC00862A6NCI5 91 aa8.1□□□□□ -1.11
CLDN11-205ENST00000480067 C9JCJ5 164 aa8.1□□□□□ -1.11
CLDN11-205ENST00000480067 PRM2P04554 102 aa8.1□□□□□ -1.11
CLDN11-205ENST00000480067 CRIP1P50238 77 aa8.1□□□□□ -1.11
CLDN11-205ENST00000480067 FAM74A3Q4VXF1 159 aa8.1□□□□□ -1.11
CLDN11-205ENST00000480067 MUC21Q5SSG8 566 aa8.1□□□□□ -1.11
CLDN11-205ENST00000480067 PRR27Q6MZM9 219 aa8.1□□□□□ -1.11
CLDN11-205ENST00000480067 COMMD7Q86VX2 200 aa8.1□□□□□ -1.11
CLDN11-205ENST00000480067 BIN3Q9NQY0 253 aa8.1□□□□□ -1.11
CLDN11-205ENST00000480067 IGHV1OR15-1A0A075B7D0 117 aa8.09□□□□□ -1.11
CLDN11-205ENST00000480067 PGPEP1LA6NFU8 196 aa8.09□□□□□ -1.11
CLDN11-205ENST00000480067 CBY3A6NI87 242 aa8.09□□□□□ -1.11
CLDN11-205ENST00000480067 UQCC3Q6UW78 93 aa8.09□□□□□ -1.11
CLDN11-205ENST00000480067 OCC1Q8TAD7 63 aa8.09□□□□□ -1.11
CLDN11-205ENST00000480067 U3KQK5 164 aa8.09□□□□□ -1.11
CLDN11-205ENST00000480067 SH2D1AO60880 128 aa8.08□□□□□ -1.12
CLDN11-205ENST00000480067 IGLV2-8P01709 118 aa8.08□□□□□ -1.12
CLDN11-205ENST00000480067 ORM1P02763 201 aa8.08□□□□□ -1.12
CLDN11-205ENST00000480067 SFTA3P0C7M3 94 aa8.08□□□□□ -1.12
CLDN11-205ENST00000480067 EMP1P54849 157 aa8.08□□□□□ -1.12
CLDN11-205ENST00000480067 TMEM241Q24JQ0 296 aa8.08□□□□□ -1.12
CLDN11-205ENST00000480067 EIF4E3Q8N5X7 224 aaKnown RBP8.08□□□□□ -1.12
CLDN11-205ENST00000480067 DAZAP1Q96EP5 407 aaKnown RBP8.08□□□□□ -1.12
CLDN11-205ENST00000480067 KCNS1Q96KK3 526 aa8.08□□□□□ -1.12
CLDN11-205ENST00000480067 LINC00467Q9BRT7 94 aa8.08□□□□□ -1.12
CLDN11-205ENST00000480067 STAB2Q8WWQ8 2551 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms