RNA–Protein interactions for RNA: ENST00000478776.1

VLDLR-204, Transcript of very low density lipoprotein receptor, humanhuman

TSL 3

Gene VLDLR, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-204ENST00000478776 LINC00322Q6ZN03 302 aaPredicted RBP1.07□□□□□ -2.24
VLDLR-204ENST00000478776 OR8J3Q8NGG0 315 aa1.07□□□□□ -2.24
VLDLR-204ENST00000478776 PFDN5Q99471 154 aa1.07□□□□□ -2.24
VLDLR-204ENST00000478776 METTL1Q9UBP6 276 aaKnown RBP1.07□□□□□ -2.24
VLDLR-204ENST00000478776 HLA-DRB4X5D2U9 266 aa1.07□□□□□ -2.24
VLDLR-204ENST00000478776 KIAA1549LQ6ZVL6 1849 aa1.07□□□□□ -2.24
VLDLR-204ENST00000478776 HEATR1Q9H583 2144 aaKnown RBP1.07□□□□□ -2.24
VLDLR-204ENST00000478776 MYH1P12882 1939 aa1.07□□□□□ -2.24
VLDLR-204ENST00000478776 SDK1Q7Z5N4 2213 aa1.07□□□□□ -2.24
VLDLR-204ENST00000478776 TNRC6AQ8NDV7 1962 aaKnown RBP1.07□□□□□ -2.24
VLDLR-204ENST00000478776 DISP2A7MBM2 1401 aa1.06□□□□□ -2.24
VLDLR-204ENST00000478776 ARHGAP31Q2M1Z3 1444 aa1.06□□□□□ -2.24
VLDLR-204ENST00000478776 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.06□□□□□ -2.24
VLDLR-204ENST00000478776 IGLV3-32A0A0A0MS00 114 aa1.06□□□□□ -2.24
VLDLR-204ENST00000478776 IFITM5A6NNB3 132 aa1.06□□□□□ -2.24
VLDLR-204ENST00000478776 ZNF25P17030 456 aaPredicted RBP1.06□□□□□ -2.24
VLDLR-204ENST00000478776 CKS2P33552 79 aa1.06□□□□□ -2.24
VLDLR-204ENST00000478776 DNAJB13P59910 316 aa1.06□□□□□ -2.24
VLDLR-204ENST00000478776 PCBD1P61457 104 aa1.06□□□□□ -2.24
VLDLR-204ENST00000478776 SNRPD3P62318 126 aaKnown RBP1.06□□□□□ -2.24
VLDLR-204ENST00000478776 GLYATL3Q5SZD4 288 aa1.06□□□□□ -2.24
VLDLR-204ENST00000478776 MMGT1Q8N4V1 131 aa1.06□□□□□ -2.24
VLDLR-204ENST00000478776 OTOSQ8NHW6 89 aa1.06□□□□□ -2.24
VLDLR-204ENST00000478776 C10orf105Q8TEF2 133 aa1.06□□□□□ -2.24
VLDLR-204ENST00000478776 MRPL57Q9BQC6 102 aaKnown RBP1.06□□□□□ -2.24
VLDLR-204ENST00000478776 SMIM3Q9BZL3 60 aa1.06□□□□□ -2.24
VLDLR-204ENST00000478776 FAM107BQ9H098 131 aa1.06□□□□□ -2.24
VLDLR-204ENST00000478776 TPT1P8Q9HAU6 139 aa1.06□□□□□ -2.24
VLDLR-204ENST00000478776 TMEM14CQ9P0S9 112 aa1.06□□□□□ -2.24
VLDLR-204ENST00000478776 ZFP30Q9Y2G7 519 aa1.06□□□□□ -2.24
VLDLR-204ENST00000478776 FGD6Q6ZV73 1430 aa1.06□□□□□ -2.24
VLDLR-204ENST00000478776 PRG4Q92954 1404 aaPredicted RBP1.06□□□□□ -2.24
VLDLR-204ENST00000478776 ERBINQ96RT1 1412 aa1.06□□□□□ -2.24
VLDLR-204ENST00000478776 M0R2Z0 102 aa1.05□□□□□ -2.24
VLDLR-204ENST00000478776 NCR2O95944 276 aa1.05□□□□□ -2.24
VLDLR-204ENST00000478776 CD3DP04234 171 aa1.05□□□□□ -2.24
VLDLR-204ENST00000478776 CD14P08571 375 aa1.05□□□□□ -2.24
VLDLR-204ENST00000478776 KDELR1P24390 212 aa1.05□□□□□ -2.24
VLDLR-204ENST00000478776 CCDC58Q4VC31 144 aa1.05□□□□□ -2.24
VLDLR-204ENST00000478776 SPRNQ5BIV9 151 aa1.05□□□□□ -2.24
VLDLR-204ENST00000478776 LINC00299Q6ZSB3 139 aa1.05□□□□□ -2.24
VLDLR-204ENST00000478776 C10orf111Q8N326 155 aa1.05□□□□□ -2.24
VLDLR-204ENST00000478776 DNAJC15Q9Y5T4 150 aa1.05□□□□□ -2.24
VLDLR-204ENST00000478776 CDK5RAP2Q96SN8 1893 aa1.05□□□□□ -2.24
VLDLR-204ENST00000478776 SOGA1O94964 1423 aa1.05□□□□□ -2.24
VLDLR-204ENST00000478776 BICRAQ9NZM4 1560 aa1.04□□□□□ -2.24
VLDLR-204ENST00000478776 LOC107984156A0A0G2JMH3 177 aa1.04□□□□□ -2.24
VLDLR-204ENST00000478776 A6NN06 94 aa1.04□□□□□ -2.24
VLDLR-204ENST00000478776 JMJD7-PLA2G4BH0Y9G9 81 aa1.04□□□□□ -2.24
VLDLR-204ENST00000478776 J3QR89 54 aa1.04□□□□□ -2.24
VLDLR-204ENST00000478776 NDUFA2O43678 99 aa1.04□□□□□ -2.24
VLDLR-204ENST00000478776 EDF1O60869 148 aaKnown RBP1.04□□□□□ -2.24
VLDLR-204ENST00000478776 DNAL4O96015 105 aa1.04□□□□□ -2.24
VLDLR-204ENST00000478776 IGLC6P0CF74 106 aa1.04□□□□□ -2.24
VLDLR-204ENST00000478776 PLGLB1Q02325 96 aa1.04□□□□□ -2.24
VLDLR-204ENST00000478776 NEDD8Q15843 81 aa1.04□□□□□ -2.24
VLDLR-204ENST00000478776 ARL17AQ8IVW1 177 aa1.04□□□□□ -2.24
VLDLR-204ENST00000478776 TCTEX1D1Q8N7M0 179 aa1.04□□□□□ -2.24
VLDLR-204ENST00000478776 PLPP5Q8NEB5 264 aa1.04□□□□□ -2.24
VLDLR-204ENST00000478776 OR10AC1Q8NH08 325 aa1.04□□□□□ -2.24
VLDLR-204ENST00000478776 OBSCN-AS1Q96MR7 158 aa1.04□□□□□ -2.24
VLDLR-204ENST00000478776 SMIM7Q9BQ49 75 aa1.04□□□□□ -2.24
VLDLR-204ENST00000478776 SLC35B3Q9H1N7 401 aa1.04□□□□□ -2.24
VLDLR-204ENST00000478776 COMMD3Q9UBI1 195 aa1.04□□□□□ -2.24
VLDLR-204ENST00000478776 TNFSF18Q9UNG2 199 aa1.04□□□□□ -2.24
VLDLR-204ENST00000478776 MUC4Q99102 2169 aa1.04□□□□□ -2.24
VLDLR-204ENST00000478776 IGHV1-24A0A0C4DH33 117 aa1.03□□□□□ -2.24
VLDLR-204ENST00000478776 A0A0J9YY99 117 aa1.03□□□□□ -2.24
VLDLR-204ENST00000478776 BBIP1A8MTZ0 92 aa1.03□□□□□ -2.24
VLDLR-204ENST00000478776 YPEL1O60688 119 aa1.03□□□□□ -2.24
VLDLR-204ENST00000478776 SULT1C4O75897 302 aa1.03□□□□□ -2.24
VLDLR-204ENST00000478776 PPYP01298 95 aa1.03□□□□□ -2.24
VLDLR-204ENST00000478776 LINC00694P0DN24 101 aa1.03□□□□□ -2.24
VLDLR-204ENST00000478776 NCS1P62166 190 aa1.03□□□□□ -2.24
VLDLR-204ENST00000478776 CTAGE3PQ8IX95 158 aa1.03□□□□□ -2.24
VLDLR-204ENST00000478776 C5orf17Q8NAS9 161 aa1.03□□□□□ -2.24
VLDLR-204ENST00000478776 TSTD1Q8NFU3 115 aa1.03□□□□□ -2.24
VLDLR-204ENST00000478776 TSC22D3Q99576 134 aa1.03□□□□□ -2.24
VLDLR-204ENST00000478776 PTPRGP23470 1445 aa1.03□□□□□ -2.24
VLDLR-204ENST00000478776 UHRF1BP1LA0JNW5 1464 aa1.03□□□□□ -2.24
VLDLR-204ENST00000478776 SYNJ1O43426 1573 aa1.03□□□□□ -2.24
VLDLR-204ENST00000478776 ANK1P16157 1881 aa1.03□□□□□ -2.25
VLDLR-204ENST00000478776 MYO18AQ92614 2054 aaKnown RBP1.03□□□□□ -2.25
VLDLR-204ENST00000478776 RP1L1Q8IWN7 2480 aaPredicted RBP1.03□□□□□ -2.25
VLDLR-204ENST00000478776 KLF7O75840 302 aaPredicted RBP1.02□□□□□ -2.25
VLDLR-204ENST00000478776 RBP4P02753 201 aa1.02□□□□□ -2.25
VLDLR-204ENST00000478776 ANGP03950 147 aaKnown RBP1.02□□□□□ -2.25
VLDLR-204ENST00000478776 LYNX1P0DP58 116 aa1.02□□□□□ -2.25
VLDLR-204ENST00000478776 PTPRDP23468 1912 aa1.02□□□□□ -2.25
VLDLR-204ENST00000478776 CHD3Q12873 2000 aaKnown RBP1.02□□□□□ -2.25
VLDLR-204ENST00000478776 CCDC171Q6TFL3 1326 aa1.02□□□□□ -2.25
VLDLR-204ENST00000478776 LPAR5Q9H1C0 372 aa1.02□□□□□ -2.25
VLDLR-204ENST00000478776 CASP8AP2Q9UKL3 1982 aa1.02□□□□□ -2.25
VLDLR-204ENST00000478776 UNC13CQ8NB66 2214 aa1.01□□□□□ -2.25
VLDLR-204ENST00000478776 HELZP42694 1942 aaKnown RBP1.01□□□□□ -2.25
VLDLR-204ENST00000478776 KIDINS220Q9ULH0 1771 aa1.01□□□□□ -2.25
VLDLR-204ENST00000478776 PHRF1Q9P1Y6 1649 aaKnown RBP1.01□□□□□ -2.25
VLDLR-204ENST00000478776 TRBV20-1A0A075B6N2 111 aa1.01□□□□□ -2.25
VLDLR-204ENST00000478776 A0A1W2PPB8 328 aa1.01□□□□□ -2.25
VLDLR-204ENST00000478776 A0A1W2PRS3 328 aa1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms