RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 RCL1Q9Y2P8 373 aaKnown RBP11.49□□□□□ -0.57
VIM-204ENST00000478746 TRAV5A0A0B4J249 113 aa11.48□□□□□ -0.57
VIM-204ENST00000478746 Q6ZNX1 250 aa11.48□□□□□ -0.57
VIM-204ENST00000478746 IQCF2Q8IXL9 164 aa11.48□□□□□ -0.57
VIM-204ENST00000478746 MRPL53Q96EL3 112 aaKnown RBP11.48□□□□□ -0.57
VIM-204ENST00000478746 FAM19A4Q96LR4 140 aa11.48□□□□□ -0.57
VIM-204ENST00000478746 MGST2Q99735 147 aa11.48□□□□□ -0.57
VIM-204ENST00000478746 ARPC5LQ9BPX5 153 aa11.48□□□□□ -0.57
VIM-204ENST00000478746 TXNDC17Q9BRA2 123 aa11.48□□□□□ -0.57
VIM-204ENST00000478746 LRP1Q07954 4544 aaKnown RBP11.47□□□□□ -0.57
VIM-204ENST00000478746 IGHV1OR15-1A0A075B7D0 117 aa11.47□□□□□ -0.57
VIM-204ENST00000478746 M0R3E3 92 aa11.47□□□□□ -0.57
VIM-204ENST00000478746 MBPP02686 304 aaPredicted RBP11.47□□□□□ -0.57
VIM-204ENST00000478746 ORM1P02763 201 aa11.47□□□□□ -0.57
VIM-204ENST00000478746 H2BFSP57053 126 aa11.47□□□□□ -0.57
VIM-204ENST00000478746 S100A10P60903 97 aa11.47□□□□□ -0.57
VIM-204ENST00000478746 Q6ZRG5 221 aa11.47□□□□□ -0.57
VIM-204ENST00000478746 NMES1Q9C002 83 aa11.47□□□□□ -0.57
VIM-204ENST00000478746 LSM5Q9Y4Y9 91 aaKnown RBP11.47□□□□□ -0.57
VIM-204ENST00000478746 IGHV3-38A0A0C4DH36 116 aa11.46□□□□□ -0.57
VIM-204ENST00000478746 ZNF253O75346 499 aa11.46□□□□□ -0.57
VIM-204ENST00000478746 SFTA3P0C7M3 94 aa11.46□□□□□ -0.57
VIM-204ENST00000478746 CRISP2P16562 243 aa11.46□□□□□ -0.57
VIM-204ENST00000478746 CAMLGP49069 296 aa11.46□□□□□ -0.57
VIM-204ENST00000478746 RAB31Q13636 194 aa11.46□□□□□ -0.57
VIM-204ENST00000478746 ZNF479Q96JC4 524 aa11.46□□□□□ -0.57
VIM-204ENST00000478746 IBA57-AS1B1ANH7 110 aa11.45□□□□□ -0.58
VIM-204ENST00000478746 L7N2F9 121 aa11.45□□□□□ -0.58
VIM-204ENST00000478746 NMBP08949 121 aa11.45□□□□□ -0.58
VIM-204ENST00000478746 PVALBP20472 110 aaPredicted RBP11.45□□□□□ -0.58
VIM-204ENST00000478746 VAMP2P63027 116 aa11.45□□□□□ -0.58
VIM-204ENST00000478746 IL15RAQ13261 267 aa11.45□□□□□ -0.58
VIM-204ENST00000478746 RAB32Q13637 225 aa11.45□□□□□ -0.58
VIM-204ENST00000478746 Q6ZQT7 251 aa11.45□□□□□ -0.58
VIM-204ENST00000478746 Q6ZSA8 131 aa11.45□□□□□ -0.58
VIM-204ENST00000478746 OR1L4Q8NGR5 311 aa11.45□□□□□ -0.58
VIM-204ENST00000478746 Q9HAA7 133 aa11.45□□□□□ -0.58
VIM-204ENST00000478746 PRELID1Q9Y255 219 aa11.45□□□□□ -0.58
VIM-204ENST00000478746 TRBV19A0A075B6N1 114 aa11.44□□□□□ -0.58
VIM-204ENST00000478746 OXTP01178 125 aa11.44□□□□□ -0.58
VIM-204ENST00000478746 LRRC37A5PQ49AS3 106 aa11.44□□□□□ -0.58
VIM-204ENST00000478746 OR10G4Q8NGN3 311 aa11.44□□□□□ -0.58
VIM-204ENST00000478746 PFDN5Q99471 154 aa11.44□□□□□ -0.58
VIM-204ENST00000478746 hCG_2014768A0A024R1R8 64 aa11.43□□□□□ -0.58
VIM-204ENST00000478746 C9JCJ5 164 aa11.43□□□□□ -0.58
VIM-204ENST00000478746 LINC01556Q5JQF7 62 aa11.43□□□□□ -0.58
VIM-204ENST00000478746 PRR9Q5T870 116 aa11.43□□□□□ -0.58
VIM-204ENST00000478746 MIC13Q5XKP0 118 aa11.43□□□□□ -0.58
VIM-204ENST00000478746 C9orf47Q6ZRZ4 202 aa11.43□□□□□ -0.58
VIM-204ENST00000478746 ZFAND2AQ8N6M9 145 aa11.43□□□□□ -0.58
VIM-204ENST00000478746 BLNKQ8WV28 456 aa11.43□□□□□ -0.58
VIM-204ENST00000478746 PPP1R1CQ8WVI7 109 aa11.43□□□□□ -0.58
VIM-204ENST00000478746 ASB13Q8WXK3 278 aa11.43□□□□□ -0.58
VIM-204ENST00000478746 TIMM9Q9Y5J7 89 aa11.43□□□□□ -0.58
VIM-204ENST00000478746 GIPP09681 153 aaPredicted RBP11.42□□□□□ -0.58
VIM-204ENST00000478746 PET100P0DJ07 73 aa11.42□□□□□ -0.58
VIM-204ENST00000478746 TMEM78Q5T7P6 136 aa11.42□□□□□ -0.58
VIM-204ENST00000478746 SH2D6Q7Z4S9 175 aa11.42□□□□□ -0.58
VIM-204ENST00000478746 SLC25A31Q9H0C2 315 aa11.42□□□□□ -0.58
VIM-204ENST00000478746 NDUFB4O95168 129 aa11.41□□□□□ -0.58
VIM-204ENST00000478746 HIST1H1EP10412 219 aaKnown RBP11.41□□□□□ -0.58
VIM-204ENST00000478746 BCAP31P51572 246 aa11.41□□□□□ -0.58
VIM-204ENST00000478746 RASL10AQ92737 203 aa11.41□□□□□ -0.58
VIM-204ENST00000478746 FAT3Q8TDW7 4589 aa11.4□□□□□ -0.58
VIM-204ENST00000478746 IGKV2-40A0A087WW87 121 aaPredicted RBP11.4□□□□□ -0.58
VIM-204ENST00000478746 MPC2O95563 127 aa11.4□□□□□ -0.58
VIM-204ENST00000478746 IGKV2D-40P01614 121 aaPredicted RBP11.4□□□□□ -0.58
VIM-204ENST00000478746 PPT1P50897 306 aa11.4□□□□□ -0.58
VIM-204ENST00000478746 CAV2P51636 162 aa11.4□□□□□ -0.58
VIM-204ENST00000478746 TIRAPP58753 221 aa11.4□□□□□ -0.58
VIM-204ENST00000478746 EXOC3-AS1Q8N2X6 119 aa11.4□□□□□ -0.58
VIM-204ENST00000478746 SPXQ9BT56 116 aa11.4□□□□□ -0.58
VIM-204ENST00000478746 UQCC1Q9NVA1 299 aa11.4□□□□□ -0.58
VIM-204ENST00000478746 TMEM14CQ9P0S9 112 aa11.4□□□□□ -0.58
VIM-204ENST00000478746 ZNF492Q9P255 531 aa11.4□□□□□ -0.58
VIM-204ENST00000478746 WDR83OSQ9Y284 106 aa11.4□□□□□ -0.58
VIM-204ENST00000478746 BOLA1Q9Y3E2 137 aa11.4□□□□□ -0.58
VIM-204ENST00000478746 TRAV8-6A0A0B4J262 113 aa11.39□□□□□ -0.59
VIM-204ENST00000478746 LOC100131303A0A0U1RQF7 123 aa11.39□□□□□ -0.59
VIM-204ENST00000478746 CST7O76096 145 aa11.39□□□□□ -0.59
VIM-204ENST00000478746 RPL29P47914 159 aaKnown RBP11.39□□□□□ -0.59
VIM-204ENST00000478746 PDE6HQ13956 83 aa11.39□□□□□ -0.59
VIM-204ENST00000478746 MUC21Q5SSG8 566 aa11.39□□□□□ -0.59
VIM-204ENST00000478746 NHLRC2Q8NBF2 726 aa11.39□□□□□ -0.59
VIM-204ENST00000478746 THAP6Q8TBB0 222 aa11.39□□□□□ -0.59
VIM-204ENST00000478746 TM2D2Q9BX73 214 aa11.39□□□□□ -0.59
VIM-204ENST00000478746 C11orf1Q9H5F2 150 aa11.39□□□□□ -0.59
VIM-204ENST00000478746 AAMDCQ9H7C9 122 aa11.39□□□□□ -0.59
VIM-204ENST00000478746 SLC39A9Q9NUM3 307 aa11.39□□□□□ -0.59
VIM-204ENST00000478746 OR5AC2Q9NZP5 309 aa11.39□□□□□ -0.59
VIM-204ENST00000478746 IGHV3-30P01768 117 aa11.38□□□□□ -0.59
VIM-204ENST00000478746 IGHV3-33P01772 117 aa11.38□□□□□ -0.59
VIM-204ENST00000478746 IGHV3-30-3P0DP02 117 aa11.38□□□□□ -0.59
VIM-204ENST00000478746 IGHV3-30-5P0DP03 117 aa11.38□□□□□ -0.59
VIM-204ENST00000478746 OR4C5Q8NGB2 326 aa11.38□□□□□ -0.59
VIM-204ENST00000478746 OR2T35Q8NGX2 323 aa11.38□□□□□ -0.59
VIM-204ENST00000478746 CHAC2Q8WUX2 184 aa11.38□□□□□ -0.59
VIM-204ENST00000478746 LYRM2Q9NU23 88 aaPredicted RBP11.38□□□□□ -0.59
VIM-204ENST00000478746 MBD2Q9UBB5 411 aa11.38□□□□□ -0.59
VIM-204ENST00000478746 TRAV4A0A0B4J268 109 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms