RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 SPRR5A0A1B0GTR4 108 aa2.25□□□□□ -2.05
CDC42BPA-212ENST00000478573 LINC00854A0A1B0GVQ3 168 aa2.25□□□□□ -2.05
CDC42BPA-212ENST00000478573 DISC1C4P0D8 188 aa2.25□□□□□ -2.05
CDC42BPA-212ENST00000478573 MFNGO00587 321 aa2.25□□□□□ -2.05
CDC42BPA-212ENST00000478573 IGKV1D-33P01593 117 aa2.25□□□□□ -2.05
CDC42BPA-212ENST00000478573 IGKV1-33P01594 117 aa2.25□□□□□ -2.05
CDC42BPA-212ENST00000478573 HLA-DRB1P01911 266 aa2.25□□□□□ -2.05
CDC42BPA-212ENST00000478573 MT-ND4LP03901 98 aa2.25□□□□□ -2.05
CDC42BPA-212ENST00000478573 OR5AL1P0C617 328 aa2.25□□□□□ -2.05
CDC42BPA-212ENST00000478573 OR4E1P0C645 316 aa2.25□□□□□ -2.05
CDC42BPA-212ENST00000478573 CD28P10747 220 aa2.25□□□□□ -2.05
CDC42BPA-212ENST00000478573 PVALBP20472 110 aaPredicted RBP2.25□□□□□ -2.05
CDC42BPA-212ENST00000478573 TAS2R20P59543 309 aa2.25□□□□□ -2.05
CDC42BPA-212ENST00000478573 RAB4BP61018 213 aa2.25□□□□□ -2.05
CDC42BPA-212ENST00000478573 RAB5BP61020 215 aa2.25□□□□□ -2.05
CDC42BPA-212ENST00000478573 HES1Q14469 280 aa2.25□□□□□ -2.05
CDC42BPA-212ENST00000478573 RHEBQ15382 184 aa2.25□□□□□ -2.05
CDC42BPA-212ENST00000478573 VAMP3Q15836 100 aa2.25□□□□□ -2.05
CDC42BPA-212ENST00000478573 PRSS8Q16651 343 aa2.25□□□□□ -2.05
CDC42BPA-212ENST00000478573 MORN2Q502X0 79 aa2.25□□□□□ -2.05
CDC42BPA-212ENST00000478573 FAM27D1Q5T7N8 215 aa2.25□□□□□ -2.05
CDC42BPA-212ENST00000478573 Q6ZS49 121 aa2.25□□□□□ -2.05
CDC42BPA-212ENST00000478573 ZNF833PQ6ZTB9 187 aa2.25□□□□□ -2.05
CDC42BPA-212ENST00000478573 NEGR1Q7Z3B1 354 aa2.25□□□□□ -2.05
CDC42BPA-212ENST00000478573 SLC35E3Q7Z769 313 aa2.25□□□□□ -2.05
CDC42BPA-212ENST00000478573 LYG2Q86SG7 212 aa2.25□□□□□ -2.05
CDC42BPA-212ENST00000478573 BAP18Q8IXM2 172 aa2.25□□□□□ -2.05
CDC42BPA-212ENST00000478573 TCTEX1D1Q8N7M0 179 aa2.25□□□□□ -2.05
CDC42BPA-212ENST00000478573 SLC35G3Q8N808 338 aa2.25□□□□□ -2.05
CDC42BPA-212ENST00000478573 LFNGQ8NES3 379 aa2.25□□□□□ -2.05
CDC42BPA-212ENST00000478573 OR4K15Q8NH41 348 aa2.25□□□□□ -2.05
CDC42BPA-212ENST00000478573 LGALS14Q8TCE9 139 aa2.25□□□□□ -2.05
CDC42BPA-212ENST00000478573 MYOZ3Q8TDC0 251 aa2.25□□□□□ -2.05
CDC42BPA-212ENST00000478573 GALMQ96C23 342 aa2.25□□□□□ -2.05
CDC42BPA-212ENST00000478573 AQP10Q96PS8 301 aa2.25□□□□□ -2.05
CDC42BPA-212ENST00000478573 PHB2Q99623 299 aa2.25□□□□□ -2.05
CDC42BPA-212ENST00000478573 NABP2Q9BQ15 211 aa2.25□□□□□ -2.05
CDC42BPA-212ENST00000478573 GINS4Q9BRT9 223 aa2.25□□□□□ -2.05
CDC42BPA-212ENST00000478573 RTBDNQ9BSG5 229 aaPredicted RBP2.25□□□□□ -2.05
CDC42BPA-212ENST00000478573 PECRQ9BY49 303 aa2.25□□□□□ -2.05
CDC42BPA-212ENST00000478573 LPAR5Q9H1C0 372 aa2.25□□□□□ -2.05
CDC42BPA-212ENST00000478573 BANF2Q9H503 90 aa2.25□□□□□ -2.05
CDC42BPA-212ENST00000478573 TAF9BQ9HBM6 251 aa2.25□□□□□ -2.05
CDC42BPA-212ENST00000478573 A0A087WWC5 75 aa2.24□□□□□ -2.05
CDC42BPA-212ENST00000478573 IGHV6-1A0A0B4J1U7 121 aa2.24□□□□□ -2.05
CDC42BPA-212ENST00000478573 IGHV3-43A0A0B4J1X8 118 aa2.24□□□□□ -2.05
CDC42BPA-212ENST00000478573 TRAV8-4A0A0B4J246 113 aa2.24□□□□□ -2.05
CDC42BPA-212ENST00000478573 B4DEV8 164 aa2.24□□□□□ -2.05
CDC42BPA-212ENST00000478573 SMLR1H3BR10 107 aa2.24□□□□□ -2.05
CDC42BPA-212ENST00000478573 H3BUA1 57 aa2.24□□□□□ -2.05
CDC42BPA-212ENST00000478573 IFNA10P01566 189 aa2.24□□□□□ -2.05
CDC42BPA-212ENST00000478573 P01737 135 aa2.24□□□□□ -2.05
CDC42BPA-212ENST00000478573 APOA2P02652 100 aa2.24□□□□□ -2.05
CDC42BPA-212ENST00000478573 APOC3P02656 99 aa2.24□□□□□ -2.05
CDC42BPA-212ENST00000478573 IL4P05112 153 aa2.24□□□□□ -2.05
CDC42BPA-212ENST00000478573 CD5P06127 495 aa2.24□□□□□ -2.05
CDC42BPA-212ENST00000478573 SAA2P0DJI9 122 aaPredicted RBP2.24□□□□□ -2.05
CDC42BPA-212ENST00000478573 HIST1H1DP16402 221 aaKnown RBP2.24□□□□□ -2.05
CDC42BPA-212ENST00000478573 PSMB6P28072 239 aa2.24□□□□□ -2.05
CDC42BPA-212ENST00000478573 BLVRBP30043 206 aaPredicted RBP2.24□□□□□ -2.05
CDC42BPA-212ENST00000478573 H2BFSP57053 126 aa2.24□□□□□ -2.05
CDC42BPA-212ENST00000478573 OR10A3P58181 314 aa2.24□□□□□ -2.05
CDC42BPA-212ENST00000478573 POLR2GP62487 172 aaKnown RBP eCLIP2.24□□□□□ -2.05
CDC42BPA-212ENST00000478573 BLCAPP62952 87 aa2.24□□□□□ -2.05
CDC42BPA-212ENST00000478573 RUNX1Q01196 453 aa2.24□□□□□ -2.05
CDC42BPA-212ENST00000478573 INSL4Q14641 139 aa2.24□□□□□ -2.05
CDC42BPA-212ENST00000478573 MSMO1Q15800 293 aa2.24□□□□□ -2.05
CDC42BPA-212ENST00000478573 LTC4SQ16873 150 aa2.24□□□□□ -2.05
CDC42BPA-212ENST00000478573 TMEM128Q5BJH2 165 aa2.24□□□□□ -2.05
CDC42BPA-212ENST00000478573 ALKAL2Q6UX46 152 aa2.24□□□□□ -2.05
CDC42BPA-212ENST00000478573 C6orf201Q7Z4U5 140 aa2.24□□□□□ -2.05
CDC42BPA-212ENST00000478573 MRPL52Q86TS9 123 aaKnown RBP2.24□□□□□ -2.05
CDC42BPA-212ENST00000478573 PDPNQ86YL7 162 aa2.24□□□□□ -2.05
CDC42BPA-212ENST00000478573 ST20-AS1Q8NBB2 130 aa2.24□□□□□ -2.05
CDC42BPA-212ENST00000478573 WFDC9Q8NEX5 89 aa2.24□□□□□ -2.05
CDC42BPA-212ENST00000478573 OR4C16Q8NGL9 310 aa2.24□□□□□ -2.05
CDC42BPA-212ENST00000478573 SFT2D1Q8WV19 159 aa2.24□□□□□ -2.05
CDC42BPA-212ENST00000478573 CACNG8Q8WXS5 425 aa2.24□□□□□ -2.05
CDC42BPA-212ENST00000478573 LEAP2Q969E1 77 aa2.24□□□□□ -2.05
CDC42BPA-212ENST00000478573 ABHD14BQ96IU4 210 aa2.24□□□□□ -2.05
CDC42BPA-212ENST00000478573 ADTRPQ96IZ2 230 aa2.24□□□□□ -2.05
CDC42BPA-212ENST00000478573 C12orf57Q99622 126 aa2.24□□□□□ -2.05
CDC42BPA-212ENST00000478573 CMSS1Q9BQ75 279 aaKnown RBP2.24□□□□□ -2.05
CDC42BPA-212ENST00000478573 MRPL20Q9BYC9 149 aaKnown RBP2.24□□□□□ -2.05
CDC42BPA-212ENST00000478573 OR2S2Q9NQN1 319 aa2.24□□□□□ -2.05
CDC42BPA-212ENST00000478573 PARP11Q9NR21 331 aa2.24□□□□□ -2.05
CDC42BPA-212ENST00000478573 UQCC1Q9NVA1 299 aa2.24□□□□□ -2.05
CDC42BPA-212ENST00000478573 PLEKHJ1Q9NW61 149 aa2.24□□□□□ -2.05
CDC42BPA-212ENST00000478573 AK3Q9UIJ7 227 aa2.24□□□□□ -2.05
CDC42BPA-212ENST00000478573 RAB22AQ9UL26 194 aa2.24□□□□□ -2.05
CDC42BPA-212ENST00000478573 DNAH7Q8WXX0 4024 aa2.23□□□□□ -2.05
CDC42BPA-212ENST00000478573 IGLV2-18A0A075B6J9 118 aa2.23□□□□□ -2.05
CDC42BPA-212ENST00000478573 FXYD6-FXYD2A0A087WZ82 144 aa2.23□□□□□ -2.05
CDC42BPA-212ENST00000478573 TRAV14DV4A0A0A6YYC5 116 aa2.23□□□□□ -2.05
CDC42BPA-212ENST00000478573 TCRBV4S1A1TA0A5B7 111 aa2.23□□□□□ -2.05
CDC42BPA-212ENST00000478573 C9orf170A2RU37 121 aa2.23□□□□□ -2.05
CDC42BPA-212ENST00000478573 C1orf196B1AJZ1 125 aa2.23□□□□□ -2.05
CDC42BPA-212ENST00000478573 ZNF736B4DX44 427 aaPredicted RBP2.23□□□□□ -2.05
CDC42BPA-212ENST00000478573 UMAD1C9J7I0 102 aa2.23□□□□□ -2.05
CDC42BPA-212ENST00000478573 ARPC5O15511 151 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms