RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 PITX3O75364 302 aa2.6□□□□□ -1.99
VPS50-214ENST00000477935 IGKV2D-28P01615 120 aa2.6□□□□□ -1.99
VPS50-214ENST00000477935 OR5AC1P0C628 307 aa2.6□□□□□ -1.99
VPS50-214ENST00000477935 IGLC1P0CG04 106 aa2.6□□□□□ -1.99
VPS50-214ENST00000477935 CHTF8P0CG12 524 aa2.6□□□□□ -1.99
VPS50-214ENST00000477935 SLC25A4P12235 298 aa2.6□□□□□ -1.99
VPS50-214ENST00000477935 POLR2IP36954 125 aaKnown RBP2.6□□□□□ -1.99
VPS50-214ENST00000477935 HERVK_113P61574 105 aa2.6□□□□□ -1.99
VPS50-214ENST00000477935 SELENOTP62341 195 aa2.6□□□□□ -1.99
VPS50-214ENST00000477935 RHOBP62745 196 aa2.6□□□□□ -1.99
VPS50-214ENST00000477935 SUPT4H1P63272 117 aaKnown RBP2.6□□□□□ -1.99
VPS50-214ENST00000477935 FLOT2Q14254 428 aa2.6□□□□□ -1.99
VPS50-214ENST00000477935 ZFP2Q6ZN57 461 aa2.6□□□□□ -1.99
VPS50-214ENST00000477935 IQCF2Q8IXL9 164 aa2.6□□□□□ -1.99
VPS50-214ENST00000477935 OR8I2Q8N0Y5 310 aa2.6□□□□□ -1.99
VPS50-214ENST00000477935 ZNF680Q8NEM1 530 aa2.6□□□□□ -1.99
VPS50-214ENST00000477935 BLNKQ8WV28 456 aa2.6□□□□□ -1.99
VPS50-214ENST00000477935 CIB1Q99828 191 aa2.6□□□□□ -1.99
VPS50-214ENST00000477935 GABARAPL1Q9H0R8 117 aa2.6□□□□□ -1.99
VPS50-214ENST00000477935 FGF20Q9NP95 211 aaPredicted RBP2.6□□□□□ -1.99
VPS50-214ENST00000477935 NUDT15Q9NV35 164 aa2.6□□□□□ -1.99
VPS50-214ENST00000477935 RAB22AQ9UL26 194 aa2.6□□□□□ -1.99
VPS50-214ENST00000477935 BLOC1S6Q9UL45 172 aa2.6□□□□□ -1.99
VPS50-214ENST00000477935 FUT9Q9Y231 359 aa2.6□□□□□ -1.99
VPS50-214ENST00000477935 ARL2BPQ9Y2Y0 163 aa2.6□□□□□ -1.99
VPS50-214ENST00000477935 IGLV4-69A0A075B6H9 119 aa2.59□□□□□ -1.99
VPS50-214ENST00000477935 TRGV1A0A0A0MS02 117 aa2.59□□□□□ -1.99
VPS50-214ENST00000477935 IRGMA1A4Y4 181 aa2.59□□□□□ -1.99
VPS50-214ENST00000477935 TMEM235A6NFC5 223 aa2.59□□□□□ -1.99
VPS50-214ENST00000477935 NOL3O60936 208 aaKnown RBP2.59□□□□□ -1.99
VPS50-214ENST00000477935 SEC11BP0C7V7 166 aa2.59□□□□□ -1.99
VPS50-214ENST00000477935 MYL12AP19105 171 aa2.59□□□□□ -1.99
VPS50-214ENST00000477935 OR10J1P30954 320 aa2.59□□□□□ -1.99
VPS50-214ENST00000477935 S100A7P31151 101 aa2.59□□□□□ -1.99
VPS50-214ENST00000477935 LPAR6P43657 344 aa2.59□□□□□ -1.99
VPS50-214ENST00000477935 GALR1P47211 349 aa2.59□□□□□ -1.99
VPS50-214ENST00000477935 CCR6P51684 374 aa2.59□□□□□ -1.99
VPS50-214ENST00000477935 CLDN12P56749 244 aa2.59□□□□□ -1.99
VPS50-214ENST00000477935 REG3AQ06141 175 aa2.59□□□□□ -1.99
VPS50-214ENST00000477935 ZNF846Q147U1 533 aa2.59□□□□□ -1.99
VPS50-214ENST00000477935 HSD17B12Q53GQ0 312 aa2.59□□□□□ -1.99
VPS50-214ENST00000477935 HSP90B2PQ58FF3 399 aa2.59□□□□□ -1.99
VPS50-214ENST00000477935 AADACL3Q5VUY0 350 aa2.59□□□□□ -1.99
VPS50-214ENST00000477935 ZNF664Q8N3J9 261 aa2.59□□□□□ -1.99
VPS50-214ENST00000477935 OR51S1Q8NGJ8 323 aa2.59□□□□□ -1.99
VPS50-214ENST00000477935 OR10R2Q8NGX6 335 aa2.59□□□□□ -1.99
VPS50-214ENST00000477935 MAFIPQ8WZ33 124 aa2.59□□□□□ -1.99
VPS50-214ENST00000477935 DPH3Q96FX2 82 aa2.59□□□□□ -1.99
VPS50-214ENST00000477935 SLC25A31Q9H0C2 315 aa2.59□□□□□ -1.99
VPS50-214ENST00000477935 PLGRKTQ9HBL7 147 aa2.59□□□□□ -1.99
VPS50-214ENST00000477935 PSORS1C2Q9UIG4 136 aa2.59□□□□□ -1.99
VPS50-214ENST00000477935 MUC17Q685J3 4493 aa2.58□□□□□ -2
VPS50-214ENST00000477935 TRGV4A0A0C4DH28 118 aa2.58□□□□□ -2
VPS50-214ENST00000477935 SPRR5A0A1B0GTR4 108 aa2.58□□□□□ -2
VPS50-214ENST00000477935 GGTLC3B5MD39 225 aa2.58□□□□□ -2
VPS50-214ENST00000477935 SPINK4O60575 86 aa2.58□□□□□ -2
VPS50-214ENST00000477935 CCNKO75909 580 aa2.58□□□□□ -2
VPS50-214ENST00000477935 PFN1P07737 140 aaKnown RBP2.58□□□□□ -2
VPS50-214ENST00000477935 HIST1H1DP16402 221 aaKnown RBP2.58□□□□□ -2
VPS50-214ENST00000477935 G6PCP35575 357 aa2.58□□□□□ -2
VPS50-214ENST00000477935 CBX5P45973 191 aa2.58□□□□□ -2
VPS50-214ENST00000477935 ETV1P50549 477 aa2.58□□□□□ -2
VPS50-214ENST00000477935 OR10A3P58181 314 aa2.58□□□□□ -2
VPS50-214ENST00000477935 TAS2R19P59542 299 aa2.58□□□□□ -2
VPS50-214ENST00000477935 KRTAP10-10P60014 251 aa2.58□□□□□ -2
VPS50-214ENST00000477935 OR10J3Q5JRS4 329 aa2.58□□□□□ -2
VPS50-214ENST00000477935 IBA57Q5T440 356 aaKnown RBP2.58□□□□□ -2
VPS50-214ENST00000477935 HACD4Q5VWC8 232 aa2.58□□□□□ -2
VPS50-214ENST00000477935 PRSS54Q6PEW0 395 aa2.58□□□□□ -2
VPS50-214ENST00000477935 DPPA3Q6W0C5 159 aa2.58□□□□□ -2
VPS50-214ENST00000477935 H2BFWTQ7Z2G1 175 aa2.58□□□□□ -2
VPS50-214ENST00000477935 C9orf163Q8N9P6 203 aa2.58□□□□□ -2
VPS50-214ENST00000477935 OR8A1Q8NGG7 326 aa2.58□□□□□ -2
VPS50-214ENST00000477935 OR51H1Q8NH63 302 aa2.58□□□□□ -2
VPS50-214ENST00000477935 RNASEH2CQ8TDP1 164 aaKnown RBP2.58□□□□□ -2
VPS50-214ENST00000477935 FAM3DQ96BQ1 224 aa2.58□□□□□ -2
VPS50-214ENST00000477935 ZC2HC1AQ96GY0 325 aa2.58□□□□□ -2
VPS50-214ENST00000477935 GPR82Q96P67 336 aa2.58□□□□□ -2
VPS50-214ENST00000477935 RSG1Q9BU20 258 aa2.58□□□□□ -2
VPS50-214ENST00000477935 DIABLOQ9NR28 239 aa2.58□□□□□ -2
VPS50-214ENST00000477935 MRPL36Q9P0J6 103 aaKnown RBP2.58□□□□□ -2
VPS50-214ENST00000477935 ANXA10Q9UJ72 324 aa2.58□□□□□ -2
VPS50-214ENST00000477935 ORC6Q9Y5N6 252 aa2.58□□□□□ -2
VPS50-214ENST00000477935 SNRPGP15A8MWD9 76 aa2.57□□□□□ -2
VPS50-214ENST00000477935 H7C1H1 209 aa2.57□□□□□ -2
VPS50-214ENST00000477935 ATP5LO75964 103 aa2.57□□□□□ -2
VPS50-214ENST00000477935 CFDP00746 253 aaPredicted RBP2.57□□□□□ -2
VPS50-214ENST00000477935 PPYP01298 95 aa2.57□□□□□ -2
VPS50-214ENST00000477935 IGHV3-30P01768 117 aa2.57□□□□□ -2
VPS50-214ENST00000477935 IGHV3-33P01772 117 aa2.57□□□□□ -2
VPS50-214ENST00000477935 FABP1P07148 127 aa2.57□□□□□ -2
VPS50-214ENST00000477935 GIPP09681 153 aaPredicted RBP2.57□□□□□ -2
VPS50-214ENST00000477935 IGHV3-30-3P0DP02 117 aa2.57□□□□□ -2
VPS50-214ENST00000477935 IGHV3-30-5P0DP03 117 aa2.57□□□□□ -2
VPS50-214ENST00000477935 RNASE2P10153 161 aaKnown RBP2.57□□□□□ -2
VPS50-214ENST00000477935 HTR2BP41595 481 aa2.57□□□□□ -2
VPS50-214ENST00000477935 RND2P52198 227 aa2.57□□□□□ -2
VPS50-214ENST00000477935 RPS25P62851 125 aaKnown RBP2.57□□□□□ -2
VPS50-214ENST00000477935 HIST1H1AQ02539 215 aaPredicted RBP2.57□□□□□ -2
VPS50-214ENST00000477935 CIRBPQ14011 172 aaKnown RBP2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms