RNA–Protein interactions for RNA: ENST00000477856.1

CNTN3-202, Transcript of contactin 3, humanhuman

TSL 3

Gene CNTN3, Length 560 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3-202ENST00000477856 KIR2DL5BA0A0G2JPC4 375 aa3.26□□□□□ -1.89
CNTN3-202ENST00000477856 A0A0J9YX75 114 aa3.26□□□□□ -1.89
CNTN3-202ENST00000477856 RBAKDNA6NC62 111 aa3.26□□□□□ -1.89
CNTN3-202ENST00000477856 H3BTX0 84 aa3.26□□□□□ -1.89
CNTN3-202ENST00000477856 IFNA1P01562 189 aa3.26□□□□□ -1.89
CNTN3-202ENST00000477856 PRB2P02812 416 aaPredicted RBP3.26□□□□□ -1.89
CNTN3-202ENST00000477856 SNRPCP09234 159 aaKnown RBP3.26□□□□□ -1.89
CNTN3-202ENST00000477856 FRMD6-AS1P0C7T7 363 aa3.26□□□□□ -1.89
CNTN3-202ENST00000477856 HLA-DRB4P13762 266 aa3.26□□□□□ -1.89
CNTN3-202ENST00000477856 FGF8P55075 233 aaPredicted RBP3.26□□□□□ -1.89
CNTN3-202ENST00000477856 RANP62826 216 aaKnown RBP3.26□□□□□ -1.89
CNTN3-202ENST00000477856 DEFB121Q5J5C9 76 aa3.26□□□□□ -1.89
CNTN3-202ENST00000477856 ACTL10Q5JWF8 245 aa3.26□□□□□ -1.89
CNTN3-202ENST00000477856 MORN3Q6PF18 240 aaPredicted RBP3.26□□□□□ -1.89
CNTN3-202ENST00000477856 SSX7Q7RTT5 188 aa3.26□□□□□ -1.89
CNTN3-202ENST00000477856 TRPT1Q86TN4 253 aaKnown RBP3.26□□□□□ -1.89
CNTN3-202ENST00000477856 KIR2DL5AQ8N109 375 aa3.26□□□□□ -1.89
CNTN3-202ENST00000477856 EXOC3-AS1Q8N2X6 119 aa3.26□□□□□ -1.89
CNTN3-202ENST00000477856 DEFB125Q8N687 156 aa3.26□□□□□ -1.89
CNTN3-202ENST00000477856 RNF182Q8N6D2 247 aa3.26□□□□□ -1.89
CNTN3-202ENST00000477856 C5orf17Q8NAS9 161 aa3.26□□□□□ -1.89
CNTN3-202ENST00000477856 KIR2DL5BQ8NHK3 375 aa3.26□□□□□ -1.89
CNTN3-202ENST00000477856 B9D2Q9BPU9 175 aa3.26□□□□□ -1.89
CNTN3-202ENST00000477856 C1QTNF4Q9BXJ3 329 aa3.26□□□□□ -1.89
CNTN3-202ENST00000477856 CTDSP1Q9GZU7 261 aa3.26□□□□□ -1.89
CNTN3-202ENST00000477856 WFDC10AQ9H1F0 79 aa3.26□□□□□ -1.89
CNTN3-202ENST00000477856 MANBALQ9NQG1 85 aa3.26□□□□□ -1.89
CNTN3-202ENST00000477856 HLA-DRB4X5D2U9 266 aa3.26□□□□□ -1.89
CNTN3-202ENST00000477856 FBN3Q75N90 2809 aa3.25□□□□□ -1.89
CNTN3-202ENST00000477856 MGAM2Q2M2H8 2515 aa3.25□□□□□ -1.89
CNTN3-202ENST00000477856 NBEAL1Q6ZS30 2694 aa3.25□□□□□ -1.89
CNTN3-202ENST00000477856 TRBV7-9A0A0J9YWB2 115 aa3.25□□□□□ -1.89
CNTN3-202ENST00000477856 PGPA6NDG6 321 aa3.25□□□□□ -1.89
CNTN3-202ENST00000477856 CBY3A6NI87 242 aa3.25□□□□□ -1.89
CNTN3-202ENST00000477856 KNCNA6PVL3 124 aa3.25□□□□□ -1.89
CNTN3-202ENST00000477856 A8MTW9 85 aa3.25□□□□□ -1.89
CNTN3-202ENST00000477856 ZNF705FA8MVS1 300 aaPredicted RBP3.25□□□□□ -1.89
CNTN3-202ENST00000477856 GGTLC3B5MD39 225 aa3.25□□□□□ -1.89
CNTN3-202ENST00000477856 F6UZH7 168 aa3.25□□□□□ -1.89
CNTN3-202ENST00000477856 H3BMM0 161 aa3.25□□□□□ -1.89
CNTN3-202ENST00000477856 EIF3GO75821 320 aaKnown RBP eCLIP3.25□□□□□ -1.89
CNTN3-202ENST00000477856 AMBPP02760 352 aa3.25□□□□□ -1.89
CNTN3-202ENST00000477856 SLC25A5P05141 298 aaKnown RBP3.25□□□□□ -1.89
CNTN3-202ENST00000477856 HLA-DMBP28068 263 aa3.25□□□□□ -1.89
CNTN3-202ENST00000477856 TSPOP30536 169 aa3.25□□□□□ -1.89
CNTN3-202ENST00000477856 SEC61GP60059 68 aa3.25□□□□□ -1.89
CNTN3-202ENST00000477856 HIST1H1AQ02539 215 aaPredicted RBP3.25□□□□□ -1.89
CNTN3-202ENST00000477856 TMEM78Q5T7P6 136 aa3.25□□□□□ -1.89
CNTN3-202ENST00000477856 LINC00322Q6ZN03 302 aaPredicted RBP3.25□□□□□ -1.89
CNTN3-202ENST00000477856 ZNF767PQ75MW2 155 aa3.25□□□□□ -1.89
CNTN3-202ENST00000477856 OR4B1Q8NGF8 309 aa3.25□□□□□ -1.89
CNTN3-202ENST00000477856 OR8A1Q8NGG7 326 aa3.25□□□□□ -1.89
CNTN3-202ENST00000477856 HIST1H2BAQ96A08 127 aa3.25□□□□□ -1.89
CNTN3-202ENST00000477856 LINC00477Q96M19 166 aa3.25□□□□□ -1.89
CNTN3-202ENST00000477856 ODF3Q96PU9 254 aa3.25□□□□□ -1.89
CNTN3-202ENST00000477856 TXNDC17Q9BRA2 123 aa3.25□□□□□ -1.89
CNTN3-202ENST00000477856 ATG101Q9BSB4 218 aa3.25□□□□□ -1.89
CNTN3-202ENST00000477856 CSTL1Q9H114 145 aa3.25□□□□□ -1.89
CNTN3-202ENST00000477856 DNAH3Q8TD57 4116 aa3.25□□□□□ -1.89
CNTN3-202ENST00000477856 TRAV26-1A0A087WT03 109 aa3.24□□□□□ -1.89
CNTN3-202ENST00000477856 A0A0U1RRA0 63 aa3.24□□□□□ -1.89
CNTN3-202ENST00000477856 A0A1B0GV50 99 aa3.24□□□□□ -1.89
CNTN3-202ENST00000477856 RBMY1BA6NDE4 496 aaKnown RBP3.24□□□□□ -1.89
CNTN3-202ENST00000477856 RBMY1EA6NEQ0 496 aaKnown RBP3.24□□□□□ -1.89
CNTN3-202ENST00000477856 FAM74A7A6NL05 159 aa3.24□□□□□ -1.89
CNTN3-202ENST00000477856 LINC00587B1AMM8 73 aa3.24□□□□□ -1.89
CNTN3-202ENST00000477856 DIRC3C9JPN6 131 aa3.24□□□□□ -1.89
CNTN3-202ENST00000477856 C11orf94C9JXX5 98 aa3.24□□□□□ -1.89
CNTN3-202ENST00000477856 PRAC2D3DTV9 90 aa3.24□□□□□ -1.89
CNTN3-202ENST00000477856 F6UB75 175 aa3.24□□□□□ -1.89
CNTN3-202ENST00000477856 M0R3E3 92 aa3.24□□□□□ -1.89
CNTN3-202ENST00000477856 PEX7O00628 323 aa3.24□□□□□ -1.89
CNTN3-202ENST00000477856 PDE6DO43924 150 aa3.24□□□□□ -1.89
CNTN3-202ENST00000477856 CA1P00915 261 aaPredicted RBP3.24□□□□□ -1.89
CNTN3-202ENST00000477856 TCRAP04437 139 aa3.24□□□□□ -1.89
CNTN3-202ENST00000477856 NMBP08949 121 aa3.24□□□□□ -1.89
CNTN3-202ENST00000477856 RBMY1DP0C7P1 496 aaKnown RBP3.24□□□□□ -1.89
CNTN3-202ENST00000477856 NHLRC4P0CG21 123 aaPredicted RBP3.24□□□□□ -1.89
CNTN3-202ENST00000477856 RPL35AP18077 110 aaKnown RBP3.24□□□□□ -1.89
CNTN3-202ENST00000477856 LEPP41159 167 aa3.24□□□□□ -1.89
CNTN3-202ENST00000477856 ZNF138P52744 262 aa3.24□□□□□ -1.89
CNTN3-202ENST00000477856 FAM3BP58499 235 aaPredicted RBP3.24□□□□□ -1.89
CNTN3-202ENST00000477856 TAS2R60P59551 318 aa3.24□□□□□ -1.89
CNTN3-202ENST00000477856 LBHQ53QV2 105 aaPredicted RBP3.24□□□□□ -1.89
CNTN3-202ENST00000477856 GDF5OSQ5U4N7 250 aa3.24□□□□□ -1.89
CNTN3-202ENST00000477856 C9orf47Q6ZRZ4 202 aa3.24□□□□□ -1.89
CNTN3-202ENST00000477856 Q6ZWC4 215 aa3.24□□□□□ -1.89
CNTN3-202ENST00000477856 BOD1L2Q8IYS8 172 aa3.24□□□□□ -1.89
CNTN3-202ENST00000477856 CYB561D1Q8N8Q1 229 aa3.24□□□□□ -1.89
CNTN3-202ENST00000477856 TMEM75Q8N9X5 138 aa3.24□□□□□ -1.89
CNTN3-202ENST00000477856 LYPD6BQ8NI32 183 aa3.24□□□□□ -1.89
CNTN3-202ENST00000477856 NDFIP1Q9BT67 221 aa3.24□□□□□ -1.89
CNTN3-202ENST00000477856 GNG13Q9P2W3 67 aa3.24□□□□□ -1.89
CNTN3-202ENST00000477856 VAX2Q9UIW0 290 aa3.24□□□□□ -1.89
CNTN3-202ENST00000477856 TP53TG1Q9Y2A0 90 aa3.24□□□□□ -1.89
CNTN3-202ENST00000477856 YTHDF2Q9Y5A9 579 aaKnown RBP3.24□□□□□ -1.89
CNTN3-202ENST00000477856 LENEPQ9Y5L5 61 aa3.24□□□□□ -1.89
CNTN3-202ENST00000477856 X6R8D5 127 aa3.24□□□□□ -1.89
CNTN3-202ENST00000477856 IGKV2-40A0A087WW87 121 aaPredicted RBP3.23□□□□□ -1.89
CNTN3-202ENST00000477856 LOC102723971A0A1B0GUV8 181 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms