RNA–Protein interactions for RNA: ENST00000477552.1

PTPRD-209, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 4

Gene PTPRD, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-209ENST00000477552 DPM2O94777 84 aa6.43□□□□□ -1.38
PTPRD-209ENST00000477552 NPYP01303 97 aa6.43□□□□□ -1.38
PTPRD-209ENST00000477552 IGHV3-23P01764 117 aa6.43□□□□□ -1.38
PTPRD-209ENST00000477552 IGHV4-39P01824 125 aa6.43□□□□□ -1.38
PTPRD-209ENST00000477552 ASIPP42127 132 aa6.43□□□□□ -1.38
PTPRD-209ENST00000477552 ZNF80P51504 273 aaPredicted RBP6.43□□□□□ -1.38
PTPRD-209ENST00000477552 TAL2Q16559 108 aa6.43□□□□□ -1.38
PTPRD-209ENST00000477552 MPV17L2Q567V2 206 aa6.43□□□□□ -1.38
PTPRD-209ENST00000477552 PAPPA-AS1Q5QFB9 102 aa6.43□□□□□ -1.38
PTPRD-209ENST00000477552 OR4C5Q8NGB2 326 aa6.43□□□□□ -1.38
PTPRD-209ENST00000477552 RNF185Q96GF1 192 aa6.43□□□□□ -1.38
PTPRD-209ENST00000477552 UFC1Q9Y3C8 167 aa6.43□□□□□ -1.38
PTPRD-209ENST00000477552 TACC2O95359 2948 aa6.43□□□□□ -1.38
PTPRD-209ENST00000477552 CACNA1BQ00975 2339 aa6.43□□□□□ -1.38
PTPRD-209ENST00000477552 A0A096LNJ9 63 aa6.42□□□□□ -1.38
PTPRD-209ENST00000477552 TRAV12-1A0A0B4J245 112 aa6.42□□□□□ -1.38
PTPRD-209ENST00000477552 LOC389332A0A1B0GUA5 103 aa6.42□□□□□ -1.38
PTPRD-209ENST00000477552 H3BRM9 83 aa6.42□□□□□ -1.38
PTPRD-209ENST00000477552 NDUFS7O75251 213 aa6.42□□□□□ -1.38
PTPRD-209ENST00000477552 MSMBP08118 114 aa6.42□□□□□ -1.38
PTPRD-209ENST00000477552 PPIFP30405 207 aaKnown RBP6.42□□□□□ -1.38
PTPRD-209ENST00000477552 LEPP41159 167 aa6.42□□□□□ -1.38
PTPRD-209ENST00000477552 VAMP3Q15836 100 aa6.42□□□□□ -1.38
PTPRD-209ENST00000477552 MAJINQ3KP22 176 aa6.42□□□□□ -1.38
PTPRD-209ENST00000477552 FBLN7Q53RD9 439 aa6.42□□□□□ -1.38
PTPRD-209ENST00000477552 PRSS57Q6UWY2 283 aa6.42□□□□□ -1.38
PTPRD-209ENST00000477552 LINC00173Q6ZV60 143 aa6.42□□□□□ -1.38
PTPRD-209ENST00000477552 GPHB5Q86YW7 130 aa6.42□□□□□ -1.38
PTPRD-209ENST00000477552 Q8TAT8 98 aa6.42□□□□□ -1.38
PTPRD-209ENST00000477552 DPH3P1Q9H4G8 78 aa6.42□□□□□ -1.38
PTPRD-209ENST00000477552 DAZ1Q9NQZ3 744 aaKnown RBP6.42□□□□□ -1.38
PTPRD-209ENST00000477552 HIVEP3Q5T1R4 2406 aa6.42□□□□□ -1.38
PTPRD-209ENST00000477552 HRNRQ86YZ3 2850 aaPredicted RBP6.41□□□□□ -1.38
PTPRD-209ENST00000477552 TRAV8-2A0A0B4J237 113 aa6.41□□□□□ -1.38
PTPRD-209ENST00000477552 A0A1W2PPR1 153 aa6.41□□□□□ -1.38
PTPRD-209ENST00000477552 G3V318 75 aa6.41□□□□□ -1.38
PTPRD-209ENST00000477552 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.41□□□□□ -1.38
PTPRD-209ENST00000477552 IGLV1-40P01703 118 aa6.41□□□□□ -1.38
PTPRD-209ENST00000477552 IGKCP01834 107 aa6.41□□□□□ -1.38
PTPRD-209ENST00000477552 PRSS1P07477 247 aa6.41□□□□□ -1.38
PTPRD-209ENST00000477552 S100A4P26447 101 aaKnown RBP6.41□□□□□ -1.38
PTPRD-209ENST00000477552 TFPI2P48307 235 aa6.41□□□□□ -1.38
PTPRD-209ENST00000477552 ERASQ7Z444 233 aa6.41□□□□□ -1.38
PTPRD-209ENST00000477552 TEX29Q8N6K0 151 aa6.41□□□□□ -1.38
PTPRD-209ENST00000477552 SPTBN1Q01082 2364 aaKnown RBP6.41□□□□□ -1.38
PTPRD-209ENST00000477552 TRAV40A0A0B4J280 105 aa6.4□□□□□ -1.38
PTPRD-209ENST00000477552 IGKV3D-20A0A0C4DH25 116 aa6.4□□□□□ -1.38
PTPRD-209ENST00000477552 IGHV7-4-1A0A0J9YVY3 117 aa6.4□□□□□ -1.38
PTPRD-209ENST00000477552 LINC01619G3V211 115 aa6.4□□□□□ -1.38
PTPRD-209ENST00000477552 H0Y8G0 127 aa6.4□□□□□ -1.38
PTPRD-209ENST00000477552 NPSP0C0P6 89 aa6.4□□□□□ -1.38
PTPRD-209ENST00000477552 ATP5J2P56134 94 aa6.4□□□□□ -1.38
PTPRD-209ENST00000477552 ERCC8Q13216 396 aa6.4□□□□□ -1.38
PTPRD-209ENST00000477552 LCE2DQ5TA82 110 aaPredicted RBP6.4□□□□□ -1.38
PTPRD-209ENST00000477552 OR5A1Q8NGJ0 315 aa6.4□□□□□ -1.38
PTPRD-209ENST00000477552 PHLDA3Q9Y5J5 127 aa6.4□□□□□ -1.38
PTPRD-209ENST00000477552 SPTBN2O15020 2390 aa6.4□□□□□ -1.39
PTPRD-209ENST00000477552 IGLV2-18A0A075B6J9 118 aa6.39□□□□□ -1.39
PTPRD-209ENST00000477552 PRAC2D3DTV9 90 aa6.39□□□□□ -1.39
PTPRD-209ENST00000477552 SOCS3O14543 225 aa6.39□□□□□ -1.39
PTPRD-209ENST00000477552 TAX1BP3O14907 124 aa6.39□□□□□ -1.39
PTPRD-209ENST00000477552 NXPH4O95158 308 aa6.39□□□□□ -1.39
PTPRD-209ENST00000477552 SMIM17P0DL12 118 aa6.39□□□□□ -1.39
PTPRD-209ENST00000477552 FGF6P10767 208 aa6.39□□□□□ -1.39
PTPRD-209ENST00000477552 GNLYP22749 145 aa6.39□□□□□ -1.39
PTPRD-209ENST00000477552 LY6DQ14210 128 aa6.39□□□□□ -1.39
PTPRD-209ENST00000477552 ODF1Q14990 250 aa6.39□□□□□ -1.39
PTPRD-209ENST00000477552 POM121L12Q8N7R1 296 aa6.39□□□□□ -1.39
PTPRD-209ENST00000477552 FAM19A4Q96LR4 140 aa6.39□□□□□ -1.39
PTPRD-209ENST00000477552 SMIM2Q9BVW6 85 aa6.39□□□□□ -1.39
PTPRD-209ENST00000477552 TIMM8BQ9Y5J9 83 aaPredicted RBP6.39□□□□□ -1.39
PTPRD-209ENST00000477552 IGHV4OR15-8A0A075B7B6 117 aa6.38□□□□□ -1.39
PTPRD-209ENST00000477552 A0A087WW49 117 aa6.38□□□□□ -1.39
PTPRD-209ENST00000477552 A0A087WX48 190 aa6.38□□□□□ -1.39
PTPRD-209ENST00000477552 IGHV3-35A0A0C4DH35 117 aa6.38□□□□□ -1.39
PTPRD-209ENST00000477552 MUC21A0A0G2JKD1 596 aa6.38□□□□□ -1.39
PTPRD-209ENST00000477552 MUC21A0A140T8X8 626 aa6.38□□□□□ -1.39
PTPRD-209ENST00000477552 H3BUX3 64 aa6.38□□□□□ -1.39
PTPRD-209ENST00000477552 H7C1H1 209 aa6.38□□□□□ -1.39
PTPRD-209ENST00000477552 K7ERU9 68 aa6.38□□□□□ -1.39
PTPRD-209ENST00000477552 DUSP14O95147 198 aaKnown RBP6.38□□□□□ -1.39
PTPRD-209ENST00000477552 PF4V1P10720 104 aa6.38□□□□□ -1.39
PTPRD-209ENST00000477552 HLA-DMBP28068 263 aa6.38□□□□□ -1.39
PTPRD-209ENST00000477552 SUMO2P61956 95 aaKnown RBP6.38□□□□□ -1.39
PTPRD-209ENST00000477552 SNRPD3P62318 126 aaKnown RBP6.38□□□□□ -1.39
PTPRD-209ENST00000477552 TM4SF20Q53R12 229 aa6.38□□□□□ -1.39
PTPRD-209ENST00000477552 MUC21Q5SSG8 566 aa6.38□□□□□ -1.39
PTPRD-209ENST00000477552 C2orf91Q6ZV80 131 aa6.38□□□□□ -1.39
PTPRD-209ENST00000477552 ZNF575Q86XF7 245 aa6.38□□□□□ -1.39
PTPRD-209ENST00000477552 RNF182Q8N6D2 247 aa6.38□□□□□ -1.39
PTPRD-209ENST00000477552 ZFAND2AQ8N6M9 145 aa6.38□□□□□ -1.39
PTPRD-209ENST00000477552 NRACQ8N912 160 aa6.38□□□□□ -1.39
PTPRD-209ENST00000477552 LINC01356Q8N9X3 169 aa6.38□□□□□ -1.39
PTPRD-209ENST00000477552 SYT8Q8NBV8 401 aa6.38□□□□□ -1.39
PTPRD-209ENST00000477552 TMEM158Q8WZ71 300 aa6.38□□□□□ -1.39
PTPRD-209ENST00000477552 IGF2RP11717 2491 aa6.38□□□□□ -1.39
PTPRD-209ENST00000477552 IGHV4-61A0A0C4DH41 118 aa6.37□□□□□ -1.39
PTPRD-209ENST00000477552 C9orf118A6NHY6 69 aa6.37□□□□□ -1.39
PTPRD-209ENST00000477552 LGALS9O00182 355 aa6.37□□□□□ -1.39
PTPRD-209ENST00000477552 CCL25O15444 150 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms