RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 C7orf71A4D174 169 aa11.14□□□□□ -0.63
SEC13-215ENST00000477547 GPX1P07203 203 aa11.14□□□□□ -0.63
SEC13-215ENST00000477547 TMEM183BQ1AE95 376 aa11.14□□□□□ -0.63
SEC13-215ENST00000477547 TMEM208Q9BTX3 173 aa11.14□□□□□ -0.63
SEC13-215ENST00000477547 DERL1Q9BUN8 251 aa11.14□□□□□ -0.63
SEC13-215ENST00000477547 RGS13O14921 159 aa11.13□□□□□ -0.63
SEC13-215ENST00000477547 RBMY1A1P0DJD3 496 aaKnown RBP11.13□□□□□ -0.63
SEC13-215ENST00000477547 RBMY1CP0DJD4 496 aa11.13□□□□□ -0.63
SEC13-215ENST00000477547 RBMY1FQ15415 496 aaKnown RBP11.13□□□□□ -0.63
SEC13-215ENST00000477547 TVP23CQ96ET8 276 aa11.13□□□□□ -0.63
SEC13-215ENST00000477547 OVOL2Q9BRP0 275 aa11.13□□□□□ -0.63
SEC13-215ENST00000477547 MED9Q9NWA0 146 aa11.13□□□□□ -0.63
SEC13-215ENST00000477547 KLF12Q9Y4X4 402 aa11.13□□□□□ -0.63
SEC13-215ENST00000477547 TRAV12-3A0A0B4J271 114 aa11.12□□□□□ -0.63
SEC13-215ENST00000477547 TRBV6-1A0A0K0K1D8 114 aa11.12□□□□□ -0.63
SEC13-215ENST00000477547 S100A9P06702 114 aaKnown RBP11.12□□□□□ -0.63
SEC13-215ENST00000477547 NHLRC4P0CG21 123 aaPredicted RBP11.12□□□□□ -0.63
SEC13-215ENST00000477547 RNASE4P34096 147 aaKnown RBP11.12□□□□□ -0.63
SEC13-215ENST00000477547 RPL35P42766 123 aaKnown RBP11.12□□□□□ -0.63
SEC13-215ENST00000477547 ZNF705AQ6ZN79 300 aaPredicted RBP11.12□□□□□ -0.63
SEC13-215ENST00000477547 C1orf158Q8N1D5 194 aa11.12□□□□□ -0.63
SEC13-215ENST00000477547 OR11H2Q8NH07 326 aa11.12□□□□□ -0.63
SEC13-215ENST00000477547 C8orf49Q96NF6 230 aa11.12□□□□□ -0.63
SEC13-215ENST00000477547 C20orf144Q9BQM9 153 aa11.12□□□□□ -0.63
SEC13-215ENST00000477547 NIPSNAP3BQ9BS92 247 aa11.12□□□□□ -0.63
SEC13-215ENST00000477547 KRTAP17-1Q9BYP8 105 aa11.12□□□□□ -0.63
SEC13-215ENST00000477547 TENM2Q9NT68 2774 aa11.12□□□□□ -0.63
SEC13-215ENST00000477547 TMEM250H0YL14 139 aa11.11□□□□□ -0.63
SEC13-215ENST00000477547 LTAP01374 205 aa11.11□□□□□ -0.63
SEC13-215ENST00000477547 CEBPGP53567 150 aa11.11□□□□□ -0.63
SEC13-215ENST00000477547 SAPCD1Q5SSQ6 148 aa11.11□□□□□ -0.63
SEC13-215ENST00000477547 TMEM256Q8N2U0 113 aa11.11□□□□□ -0.63
SEC13-215ENST00000477547 SMUG1Q53HV7 270 aa11.1□□□□□ -0.63
SEC13-215ENST00000477547 CENPWQ5EE01 88 aa11.1□□□□□ -0.63
SEC13-215ENST00000477547 NHLRC2Q8NBF2 726 aa11.1□□□□□ -0.63
SEC13-215ENST00000477547 ZFP30Q9Y2G7 519 aa11.1□□□□□ -0.63
SEC13-215ENST00000477547 X6R8D5 127 aa11.1□□□□□ -0.63
SEC13-215ENST00000477547 H7BYZ3 331 aa11.09□□□□□ -0.63
SEC13-215ENST00000477547 GCGP01275 180 aa11.09□□□□□ -0.63
SEC13-215ENST00000477547 TAS2R60P59551 318 aa11.09□□□□□ -0.63
SEC13-215ENST00000477547 PARLQ9H300 379 aa11.09□□□□□ -0.63
SEC13-215ENST00000477547 NDUFS6O75380 124 aaKnown RBP11.09□□□□□ -0.63
SEC13-215ENST00000477547 SRP19P09132 144 aaKnown RBP11.09□□□□□ -0.63
SEC13-215ENST00000477547 GNG4P50150 75 aa11.09□□□□□ -0.63
SEC13-215ENST00000477547 PEA15Q15121 130 aa11.09□□□□□ -0.63
SEC13-215ENST00000477547 ZNF674Q2M3X9 581 aa11.09□□□□□ -0.63
SEC13-215ENST00000477547 Q6AWC8 147 aa11.09□□□□□ -0.63
SEC13-215ENST00000477547 BAGE2Q86Y30 109 aa11.09□□□□□ -0.63
SEC13-215ENST00000477547 TMEM183AQ8IXX5 376 aa11.09□□□□□ -0.63
SEC13-215ENST00000477547 ZC2HC1AQ96GY0 325 aa11.09□□□□□ -0.63
SEC13-215ENST00000477547 LINC01587Q99440 93 aa11.09□□□□□ -0.63
SEC13-215ENST00000477547 TRAV21A0A0B4J279 112 aa11.08□□□□□ -0.64
SEC13-215ENST00000477547 RAB19A4D1S5 217 aa11.08□□□□□ -0.64
SEC13-215ENST00000477547 MIFP14174 115 aa11.08□□□□□ -0.64
SEC13-215ENST00000477547 ZNF80P51504 273 aaPredicted RBP11.08□□□□□ -0.64
SEC13-215ENST00000477547 SRSF3P84103 164 aaKnown RBP11.08□□□□□ -0.64
SEC13-215ENST00000477547 Q6ZQT7 251 aa11.08□□□□□ -0.64
SEC13-215ENST00000477547 NEU1Q99519 415 aa11.08□□□□□ -0.64
SEC13-215ENST00000477547 PYGO2Q9BRQ0 406 aa11.08□□□□□ -0.64
SEC13-215ENST00000477547 NAGKQ9UJ70 344 aa11.08□□□□□ -0.64
SEC13-215ENST00000477547 U3KQK5 164 aa11.08□□□□□ -0.64
SEC13-215ENST00000477547 TRBV20OR9-2A0A075B6H5 130 aa11.07□□□□□ -0.64
SEC13-215ENST00000477547 IGHV4-28A0A0C4DH34 117 aa11.07□□□□□ -0.64
SEC13-215ENST00000477547 ZNF705GA8MUZ8 300 aaPredicted RBP11.07□□□□□ -0.64
SEC13-215ENST00000477547 ZNF324O75467 553 aaPredicted RBP11.07□□□□□ -0.64
SEC13-215ENST00000477547 HTN1P15515 57 aa11.07□□□□□ -0.64
SEC13-215ENST00000477547 RRN3P1Q2M238 152 aa11.07□□□□□ -0.64
SEC13-215ENST00000477547 MUC21Q5SSG8 566 aa11.07□□□□□ -0.64
SEC13-215ENST00000477547 Q8NAQ8 132 aa11.07□□□□□ -0.64
SEC13-215ENST00000477547 SMIM7Q9BQ49 75 aa11.07□□□□□ -0.64
SEC13-215ENST00000477547 SMIM9A6NGZ8 99 aa11.06□□□□□ -0.64
SEC13-215ENST00000477547 C9JCJ5 164 aa11.06□□□□□ -0.64
SEC13-215ENST00000477547 C9JQL5 133 aa11.06□□□□□ -0.64
SEC13-215ENST00000477547 PFN1P07737 140 aaKnown RBP11.06□□□□□ -0.64
SEC13-215ENST00000477547 COX8CQ7Z4L0 72 aa11.06□□□□□ -0.64
SEC13-215ENST00000477547 SMDT1Q9H4I9 107 aa11.06□□□□□ -0.64
SEC13-215ENST00000477547 DNAH1Q9P2D7 4330 aa11.05□□□□□ -0.64
SEC13-215ENST00000477547 IGHV1OR15-1A0A075B7D0 117 aa11.05□□□□□ -0.64
SEC13-215ENST00000477547 PGPEP1LA6NFU8 196 aa11.05□□□□□ -0.64
SEC13-215ENST00000477547 CBY3A6NI87 242 aa11.05□□□□□ -0.64
SEC13-215ENST00000477547 DEFB4AO15263 64 aa11.05□□□□□ -0.64
SEC13-215ENST00000477547 SH2D1AO60880 128 aa11.05□□□□□ -0.64
SEC13-215ENST00000477547 PRM2P04554 102 aa11.05□□□□□ -0.64
SEC13-215ENST00000477547 MGST1P10620 155 aaKnown RBP11.05□□□□□ -0.64
SEC13-215ENST00000477547 FAM162BQ5T6X4 162 aa11.05□□□□□ -0.64
SEC13-215ENST00000477547 PRR27Q6MZM9 219 aa11.05□□□□□ -0.64
SEC13-215ENST00000477547 COMMD7Q86VX2 200 aa11.05□□□□□ -0.64
SEC13-215ENST00000477547 EIF4E3Q8N5X7 224 aaKnown RBP11.05□□□□□ -0.64
SEC13-215ENST00000477547 SMIM12Q96EX1 92 aa11.05□□□□□ -0.64
SEC13-215ENST00000477547 MLST8Q9BVC4 326 aa11.05□□□□□ -0.64
SEC13-215ENST00000477547 C11orf68Q9H3H3 251 aaKnown RBP11.05□□□□□ -0.64
SEC13-215ENST00000477547 A0A0J9YWU9 116 aa11.04□□□□□ -0.64
SEC13-215ENST00000477547 ZNF727A8MUV8 499 aa11.04□□□□□ -0.64
SEC13-215ENST00000477547 C3orf84H3BNL1 204 aa11.04□□□□□ -0.64
SEC13-215ENST00000477547 IGLV2-8P01709 118 aa11.04□□□□□ -0.64
SEC13-215ENST00000477547 FAM159AQ6UWV7 190 aa11.04□□□□□ -0.64
SEC13-215ENST00000477547 TMEM263Q8WUH6 116 aaKnown RBP11.04□□□□□ -0.64
SEC13-215ENST00000477547 C16orf74Q96GX8 76 aa11.04□□□□□ -0.64
SEC13-215ENST00000477547 LINC00467Q9BRT7 94 aa11.04□□□□□ -0.64
SEC13-215ENST00000477547 DNAH7Q8WXX0 4024 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms