RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 SMIM7Q9BQ49 75 aa11.82□□□□□ -0.52
VHL-203ENST00000477538 TRBV20OR9-2A0A075B6H5 130 aa11.81□□□□□ -0.52
VHL-203ENST00000477538 C7orf71A4D174 169 aa11.81□□□□□ -0.52
VHL-203ENST00000477538 RNASE4P34096 147 aaKnown RBP11.81□□□□□ -0.52
VHL-203ENST00000477538 BTN1A1Q13410 526 aa11.81□□□□□ -0.52
VHL-203ENST00000477538 DEFB135Q30KP9 77 aa11.81□□□□□ -0.52
VHL-203ENST00000477538 SMUG1Q53HV7 270 aa11.81□□□□□ -0.52
VHL-203ENST00000477538 TMEM183AQ8IXX5 376 aa11.81□□□□□ -0.52
VHL-203ENST00000477538 EIF4E3Q8N5X7 224 aaKnown RBP11.81□□□□□ -0.52
VHL-203ENST00000477538 NHLRC2Q8NBF2 726 aa11.81□□□□□ -0.52
VHL-203ENST00000477538 TRAV12-3A0A0B4J271 114 aa11.8□□□□□ -0.52
VHL-203ENST00000477538 ZNF727A8MUV8 499 aa11.8□□□□□ -0.52
VHL-203ENST00000477538 C9JCJ5 164 aa11.8□□□□□ -0.52
VHL-203ENST00000477538 GCGP01275 180 aa11.8□□□□□ -0.52
VHL-203ENST00000477538 SFTA3P0C7M3 94 aa11.8□□□□□ -0.52
VHL-203ENST00000477538 SBSPONQ8IVN8 264 aa11.8□□□□□ -0.52
VHL-203ENST00000477538 CSNK1G2-AS1Q8NCQ2 148 aa11.8□□□□□ -0.52
VHL-203ENST00000477538 PGPEP1LA6NFU8 196 aa11.79□□□□□ -0.52
VHL-203ENST00000477538 IGLV2-8P01709 118 aa11.79□□□□□ -0.52
VHL-203ENST00000477538 SOHLH1Q5JUK2 328 aa11.79□□□□□ -0.52
VHL-203ENST00000477538 Q6ZWC4 215 aa11.79□□□□□ -0.52
VHL-203ENST00000477538 COX8CQ7Z4L0 72 aa11.79□□□□□ -0.52
VHL-203ENST00000477538 SMIM12Q96EX1 92 aa11.79□□□□□ -0.52
VHL-203ENST00000477538 ZC2HC1AQ96GY0 325 aa11.79□□□□□ -0.52
VHL-203ENST00000477538 C20orf144Q9BQM9 153 aa11.79□□□□□ -0.52
VHL-203ENST00000477538 MLST8Q9BVC4 326 aa11.79□□□□□ -0.52
VHL-203ENST00000477538 RBMY1A1P0DJD3 496 aaKnown RBP11.78□□□□□ -0.52
VHL-203ENST00000477538 RBMY1CP0DJD4 496 aa11.78□□□□□ -0.52
VHL-203ENST00000477538 MGST1P10620 155 aaKnown RBP11.78□□□□□ -0.52
VHL-203ENST00000477538 ZNF80P51504 273 aaPredicted RBP11.78□□□□□ -0.52
VHL-203ENST00000477538 RBMY1FQ15415 496 aaKnown RBP11.78□□□□□ -0.52
VHL-203ENST00000477538 FAM74A3Q4VXF1 159 aa11.78□□□□□ -0.52
VHL-203ENST00000477538 Q6AWC8 147 aa11.78□□□□□ -0.52
VHL-203ENST00000477538 C1orf158Q8N1D5 194 aa11.78□□□□□ -0.52
VHL-203ENST00000477538 RCHY1Q96PM5 261 aa11.78□□□□□ -0.52
VHL-203ENST00000477538 B9D2Q9BPU9 175 aa11.78□□□□□ -0.52
VHL-203ENST00000477538 NIPSNAP3BQ9BS92 247 aa11.78□□□□□ -0.52
VHL-203ENST00000477538 GOLT1BQ9Y3E0 138 aa11.78□□□□□ -0.52
VHL-203ENST00000477538 MEGF8Q7Z7M0 2845 aa11.77□□□□□ -0.53
VHL-203ENST00000477538 IGHV3OR16-12A0A075B7B8 117 aa11.77□□□□□ -0.53
VHL-203ENST00000477538 Q6ZQT7 251 aa11.77□□□□□ -0.53
VHL-203ENST00000477538 TMEM256Q8N2U0 113 aa11.77□□□□□ -0.53
VHL-203ENST00000477538 RNF183Q96D59 192 aa11.77□□□□□ -0.53
VHL-203ENST00000477538 TMEM208Q9BTX3 173 aa11.77□□□□□ -0.53
VHL-203ENST00000477538 NBEAL2Q6ZNJ1 2754 aa11.77□□□□□ -0.53
VHL-203ENST00000477538 TRAV21A0A0B4J279 112 aa11.76□□□□□ -0.53
VHL-203ENST00000477538 ZNF324O75467 553 aaPredicted RBP11.76□□□□□ -0.53
VHL-203ENST00000477538 PFN1P07737 140 aaKnown RBP11.76□□□□□ -0.53
VHL-203ENST00000477538 PRR27Q6MZM9 219 aa11.76□□□□□ -0.53
VHL-203ENST00000477538 OCC1Q8TAD7 63 aa11.76□□□□□ -0.53
VHL-203ENST00000477538 RETNQ9HD89 108 aa11.76□□□□□ -0.53
VHL-203ENST00000477538 LY96Q9Y6Y9 160 aa11.76□□□□□ -0.53
VHL-203ENST00000477538 TMEM218A2RU14 115 aa11.75□□□□□ -0.53
VHL-203ENST00000477538 H7BYZ3 331 aa11.75□□□□□ -0.53
VHL-203ENST00000477538 SPRY2O43597 315 aa11.75□□□□□ -0.53
VHL-203ENST00000477538 CRIP1P50238 77 aa11.75□□□□□ -0.53
VHL-203ENST00000477538 TMEM241Q24JQ0 296 aa11.75□□□□□ -0.53
VHL-203ENST00000477538 FAM162BQ5T6X4 162 aa11.75□□□□□ -0.53
VHL-203ENST00000477538 ZNF705AQ6ZN79 300 aaPredicted RBP11.75□□□□□ -0.53
VHL-203ENST00000477538 LINC01587Q99440 93 aa11.75□□□□□ -0.53
VHL-203ENST00000477538 SPATA25Q9BR10 227 aa11.75□□□□□ -0.53
VHL-203ENST00000477538 TM2D3Q9BRN9 247 aa11.75□□□□□ -0.53
VHL-203ENST00000477538 BIN3Q9NQY0 253 aa11.75□□□□□ -0.53
VHL-203ENST00000477538 NAT8Q9UHE5 227 aa11.75□□□□□ -0.53
VHL-203ENST00000477538 TP53TG1Q9Y2A0 90 aa11.75□□□□□ -0.53
VHL-203ENST00000477538 FABP5P3A8MUU1 101 aa11.74□□□□□ -0.53
VHL-203ENST00000477538 K7EN84 100 aa11.74□□□□□ -0.53
VHL-203ENST00000477538 SH2D1AO60880 128 aa11.74□□□□□ -0.53
VHL-203ENST00000477538 NDUFA5Q16718 116 aa11.74□□□□□ -0.53
VHL-203ENST00000477538 LINC01551Q86U37 167 aa11.74□□□□□ -0.53
VHL-203ENST00000477538 OVOL2Q9BRP0 275 aa11.74□□□□□ -0.53
VHL-203ENST00000477538 OR5I1Q13606 314 aa11.73□□□□□ -0.53
VHL-203ENST00000477538 MUC21Q5SSG8 566 aa11.73□□□□□ -0.53
VHL-203ENST00000477538 SLC7A5P1Q8MH63 180 aa11.73□□□□□ -0.53
VHL-203ENST00000477538 OR11H2Q8NH07 326 aa11.73□□□□□ -0.53
VHL-203ENST00000477538 PYGO2Q9BRQ0 406 aa11.73□□□□□ -0.53
VHL-203ENST00000477538 NAGKQ9UJ70 344 aa11.73□□□□□ -0.53
VHL-203ENST00000477538 IGHV1OR15-1A0A075B7D0 117 aa11.72□□□□□ -0.53
VHL-203ENST00000477538 F8W036 122 aa11.72□□□□□ -0.53
VHL-203ENST00000477538 HTN1P15515 57 aa11.72□□□□□ -0.53
VHL-203ENST00000477538 ADCYAP1P18509 176 aa11.72□□□□□ -0.53
VHL-203ENST00000477538 RPL23P62829 140 aaKnown RBP11.72□□□□□ -0.53
VHL-203ENST00000477538 FAM159AQ6UWV7 190 aa11.72□□□□□ -0.53
VHL-203ENST00000477538 ZMAT4Q9H898 229 aa11.72□□□□□ -0.53
VHL-203ENST00000477538 SDF2L1Q9HCN8 221 aa11.72□□□□□ -0.53
VHL-203ENST00000477538 C11orf21Q9P2W6 132 aa11.72□□□□□ -0.53
VHL-203ENST00000477538 X6R8D5 127 aa11.72□□□□□ -0.53
VHL-203ENST00000477538 TENM3Q9P273 2699 aa11.72□□□□□ -0.53
VHL-203ENST00000477538 C19orf71A6NCJ1 209 aa11.71□□□□□ -0.53
VHL-203ENST00000477538 ZNF705GA8MUZ8 300 aaPredicted RBP11.71□□□□□ -0.53
VHL-203ENST00000477538 ADIRFQ15847 76 aa11.71□□□□□ -0.53
VHL-203ENST00000477538 ANXA2RQ3ZCQ2 193 aa11.71□□□□□ -0.53
VHL-203ENST00000477538 DAZAP1Q96EP5 407 aaKnown RBP11.71□□□□□ -0.53
VHL-203ENST00000477538 NEU1Q99519 415 aa11.71□□□□□ -0.53
VHL-203ENST00000477538 LINC00467Q9BRT7 94 aa11.71□□□□□ -0.53
VHL-203ENST00000477538 SEC11CQ9BY50 192 aa11.71□□□□□ -0.53
VHL-203ENST00000477538 SMIM9A6NGZ8 99 aa11.7□□□□□ -0.54
VHL-203ENST00000477538 ORM1P02763 201 aa11.7□□□□□ -0.54
VHL-203ENST00000477538 PRM2P04554 102 aa11.7□□□□□ -0.54
VHL-203ENST00000477538 RRN3P1Q2M238 152 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms