RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 LINC00173Q6ZV60 143 aa8.73□□□□□ -1.01
NUP188-205ENST00000477069 MUC21A0A0G2JKD1 596 aa8.73□□□□□ -1.01
NUP188-205ENST00000477069 IGHV7-4-1A0A0J9YVY3 117 aa8.73□□□□□ -1.01
NUP188-205ENST00000477069 MUC21A0A140T8X8 626 aa8.73□□□□□ -1.01
NUP188-205ENST00000477069 D6R8Y8 96 aa8.73□□□□□ -1.01
NUP188-205ENST00000477069 MUC21Q5SSG8 566 aa8.73□□□□□ -1.01
NUP188-205ENST00000477069 C2orf88Q9BSF0 95 aa8.73□□□□□ -1.01
NUP188-205ENST00000477069 LENEPQ9Y5L5 61 aa8.73□□□□□ -1.01
NUP188-205ENST00000477069 TMEM89A2RUT3 159 aa8.72□□□□□ -1.01
NUP188-205ENST00000477069 EREGO14944 169 aa8.72□□□□□ -1.01
NUP188-205ENST00000477069 DEFB113Q30KQ7 82 aa8.72□□□□□ -1.01
NUP188-205ENST00000477069 LBHQ53QV2 105 aaPredicted RBP8.72□□□□□ -1.01
NUP188-205ENST00000477069 PRR9Q5T870 116 aa8.72□□□□□ -1.01
NUP188-205ENST00000477069 TMEM191AQ9H0A3 160 aa8.72□□□□□ -1.01
NUP188-205ENST00000477069 TM4SF20Q53R12 229 aa8.72□□□□□ -1.01
NUP188-205ENST00000477069 Q6YL49 198 aa8.72□□□□□ -1.01
NUP188-205ENST00000477069 KRTAP1-3Q8IUG1 177 aa8.72□□□□□ -1.01
NUP188-205ENST00000477069 RNF185Q96GF1 192 aa8.72□□□□□ -1.01
NUP188-205ENST00000477069 FAM19A4Q96LR4 140 aa8.72□□□□□ -1.01
NUP188-205ENST00000477069 TMEM70Q9BUB7 260 aa8.72□□□□□ -1.01
NUP188-205ENST00000477069 PEF1Q9UBV8 284 aaKnown RBP8.72□□□□□ -1.01
NUP188-205ENST00000477069 SPG11Q96JI7 2443 aa8.72□□□□□ -1.01
NUP188-205ENST00000477069 K7EMT4 169 aa8.71□□□□□ -1.01
NUP188-205ENST00000477069 OR5AL1P0C617 328 aa8.71□□□□□ -1.01
NUP188-205ENST00000477069 FOXE3Q13461 319 aa8.71□□□□□ -1.01
NUP188-205ENST00000477069 TWIST1Q15672 202 aa8.71□□□□□ -1.01
NUP188-205ENST00000477069 SPATA45Q537H7 98 aa8.71□□□□□ -1.01
NUP188-205ENST00000477069 C10orf99Q6UWK7 81 aa8.71□□□□□ -1.01
NUP188-205ENST00000477069 Q6ZQT7 251 aa8.71□□□□□ -1.01
NUP188-205ENST00000477069 ORMDL3Q8N138 153 aa8.71□□□□□ -1.01
NUP188-205ENST00000477069 DAZ1Q9NQZ3 744 aaKnown RBP8.71□□□□□ -1.01
NUP188-205ENST00000477069 MSRB1Q9NZV6 116 aa8.71□□□□□ -1.01
NUP188-205ENST00000477069 VPREB3Q9UKI3 123 aa8.71□□□□□ -1.01
NUP188-205ENST00000477069 ZFYVE26Q68DK2 2539 aa8.71□□□□□ -1.01
NUP188-205ENST00000477069 LEPROTL1O95214 131 aa8.71□□□□□ -1.02
NUP188-205ENST00000477069 CSN3P07498 182 aa8.71□□□□□ -1.02
NUP188-205ENST00000477069 EDN2P20800 178 aa8.71□□□□□ -1.02
NUP188-205ENST00000477069 MAJINQ3KP22 176 aa8.71□□□□□ -1.02
NUP188-205ENST00000477069 ZNF738Q8NE65 137 aa8.71□□□□□ -1.02
NUP188-205ENST00000477069 RHPN1-AS1Q9BWJ2 59 aa8.71□□□□□ -1.02
NUP188-205ENST00000477069 SNHG12Q9BXW3 62 aa8.71□□□□□ -1.02
NUP188-205ENST00000477069 ZANQ9Y493 2812 aa8.71□□□□□ -1.02
NUP188-205ENST00000477069 PRRC2AP48634 2157 aaKnown RBP8.71□□□□□ -1.02
NUP188-205ENST00000477069 Q5PR19 223 aa8.7□□□□□ -1.02
NUP188-205ENST00000477069 PRELID3AQ96N28 172 aa8.7□□□□□ -1.02
NUP188-205ENST00000477069 SMPXQ9UHP9 88 aa8.7□□□□□ -1.02
NUP188-205ENST00000477069 A0A096LNJ9 63 aa8.7□□□□□ -1.02
NUP188-205ENST00000477069 SYS1-DBNDD2H3BUS1 97 aa8.7□□□□□ -1.02
NUP188-205ENST00000477069 OVOL1O14753 267 aa8.7□□□□□ -1.02
NUP188-205ENST00000477069 MRPL52Q86TS9 123 aaKnown RBP8.7□□□□□ -1.02
NUP188-205ENST00000477069 ZFAND2AQ8N6M9 145 aa8.7□□□□□ -1.02
NUP188-205ENST00000477069 MYOZ3Q8TDC0 251 aa8.7□□□□□ -1.02
NUP188-205ENST00000477069 LINC00477Q96M19 166 aa8.7□□□□□ -1.02
NUP188-205ENST00000477069 AP5S1Q9NUS5 200 aa8.7□□□□□ -1.02
NUP188-205ENST00000477069 SIGLEC8Q9NYZ4 499 aa8.7□□□□□ -1.02
NUP188-205ENST00000477069 IFI27P40305 119 aaPredicted RBP8.7□□□□□ -1.02
NUP188-205ENST00000477069 FAM106AQ4KMX7 169 aa8.7□□□□□ -1.02
NUP188-205ENST00000477069 APRG1Q8IVJ8 170 aa8.7□□□□□ -1.02
NUP188-205ENST00000477069 ATOH7Q8N100 152 aa8.7□□□□□ -1.02
NUP188-205ENST00000477069 IGLC3P0DOY3 106 aa8.69□□□□□ -1.02
NUP188-205ENST00000477069 ZNF702PQ9H963 129 aa8.69□□□□□ -1.02
NUP188-205ENST00000477069 IGHV4-4A0A075B6R2 117 aa8.69□□□□□ -1.02
NUP188-205ENST00000477069 SNAI2O43623 268 aa8.69□□□□□ -1.02
NUP188-205ENST00000477069 NPYP01303 97 aa8.69□□□□□ -1.02
NUP188-205ENST00000477069 ZNF469Q96JG9 3925 aaPredicted RBP8.69□□□□□ -1.02
NUP188-205ENST00000477069 TRAV9-2A0A087WT02 112 aa8.68□□□□□ -1.02
NUP188-205ENST00000477069 DEFB1P60022 68 aa8.68□□□□□ -1.02
NUP188-205ENST00000477069 LINC01546A6NGU7 62 aa8.68□□□□□ -1.02
NUP188-205ENST00000477069 SMKR1H3BMG3 65 aa8.68□□□□□ -1.02
NUP188-205ENST00000477069 ZNF705AQ6ZN79 300 aaPredicted RBP8.68□□□□□ -1.02
NUP188-205ENST00000477069 FA2HQ7L5A8 372 aa8.68□□□□□ -1.02
NUP188-205ENST00000477069 PRSS3P2Q8NHM4 247 aa8.68□□□□□ -1.02
NUP188-205ENST00000477069 HSPB8Q9UJY1 196 aa8.68□□□□□ -1.02
NUP188-205ENST00000477069 CENPEQ02224 2701 aa8.68□□□□□ -1.02
NUP188-205ENST00000477069 OR10J6PQ8NGY7 276 aa8.67□□□□□ -1.02
NUP188-205ENST00000477069 DCANP1Q8TF63 244 aa8.67□□□□□ -1.02
NUP188-205ENST00000477069 MXRA5Q9NR99 2828 aa8.67□□□□□ -1.02
NUP188-205ENST00000477069 NBPF19A0A087WUL8 3843 aa8.67□□□□□ -1.02
NUP188-205ENST00000477069 TRBV7-9A0A0J9YWB2 115 aa8.67□□□□□ -1.02
NUP188-205ENST00000477069 C20orf202A1L168 122 aa8.67□□□□□ -1.02
NUP188-205ENST00000477069 M0R143 59 aa8.67□□□□□ -1.02
NUP188-205ENST00000477069 RPLP1P05386 114 aaKnown RBP8.67□□□□□ -1.02
NUP188-205ENST00000477069 CKS2P33552 79 aa8.67□□□□□ -1.02
NUP188-205ENST00000477069 PET117Q6UWS5 81 aa8.67□□□□□ -1.02
NUP188-205ENST00000477069 PRSS57Q6UWY2 283 aa8.67□□□□□ -1.02
NUP188-205ENST00000477069 RNF152Q8N8N0 203 aa8.67□□□□□ -1.02
NUP188-205ENST00000477069 OR8A1Q8NGG7 326 aa8.67□□□□□ -1.02
NUP188-205ENST00000477069 OR10AG1Q8NH19 301 aa8.67□□□□□ -1.02
NUP188-205ENST00000477069 ZNF747Q9BV97 191 aa8.67□□□□□ -1.02
NUP188-205ENST00000477069 GAS8-AS1O95177 125 aa8.67□□□□□ -1.02
NUP188-205ENST00000477069 NCR2O95944 276 aa8.67□□□□□ -1.02
NUP188-205ENST00000477069 Q96MF0 132 aa8.67□□□□□ -1.02
NUP188-205ENST00000477069 MAP1LC3CQ9BXW4 147 aa8.67□□□□□ -1.02
NUP188-205ENST00000477069 UFC1Q9Y3C8 167 aa8.67□□□□□ -1.02
NUP188-205ENST00000477069 LOC389332A0A1B0GUA5 103 aa8.66□□□□□ -1.02
NUP188-205ENST00000477069 OR4C46A6NHA9 309 aa8.66□□□□□ -1.02
NUP188-205ENST00000477069 F6UB75 175 aa8.66□□□□□ -1.02
NUP188-205ENST00000477069 HOXA3O43365 443 aaPredicted RBP8.66□□□□□ -1.02
NUP188-205ENST00000477069 PPBPP02775 128 aa8.66□□□□□ -1.02
NUP188-205ENST00000477069 IGLL1P15814 213 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms