RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 MRPS36P82909 103 aaKnown RBP3.21□□□□□ -1.9
CD55-208ENST00000476590 PIGYQ3MUY2 71 aa3.21□□□□□ -1.9
CD55-208ENST00000476590 ASPHD1Q5U4P2 390 aa3.21□□□□□ -1.9
CD55-208ENST00000476590 FAM104BQ5XKR9 115 aa3.21□□□□□ -1.9
CD55-208ENST00000476590 Q8N8P6 123 aa3.21□□□□□ -1.9
CD55-208ENST00000476590 PRR26Q8N8Z3 221 aa3.21□□□□□ -1.9
CD55-208ENST00000476590 FGFBP3Q8TAT2 258 aa3.21□□□□□ -1.9
CD55-208ENST00000476590 FOXC2Q99958 501 aa3.21□□□□□ -1.9
CD55-208ENST00000476590 RNF181Q9P0P0 153 aa3.21□□□□□ -1.9
CD55-208ENST00000476590 RP1L1Q8IWN7 2480 aaPredicted RBP3.2□□□□□ -1.9
CD55-208ENST00000476590 M0R135 149 aa3.2□□□□□ -1.9
CD55-208ENST00000476590 GP9P14770 177 aa3.2□□□□□ -1.9
CD55-208ENST00000476590 LIFP15018 202 aa3.2□□□□□ -1.9
CD55-208ENST00000476590 SDIM1Q6ZPB5 146 aa3.2□□□□□ -1.9
CD55-208ENST00000476590 Q6ZRU5 148 aa3.2□□□□□ -1.9
CD55-208ENST00000476590 FP248Q71RG6 208 aaPredicted RBP3.2□□□□□ -1.9
CD55-208ENST00000476590 PRR15Q8IV56 129 aa3.2□□□□□ -1.9
CD55-208ENST00000476590 MKXQ8IYA7 352 aa3.2□□□□□ -1.9
CD55-208ENST00000476590 ORMDL3Q8N138 153 aa3.2□□□□□ -1.9
CD55-208ENST00000476590 C17orf77Q96MU5 243 aa3.2□□□□□ -1.9
CD55-208ENST00000476590 FAM30AQ9NZY2 134 aa3.2□□□□□ -1.9
CD55-208ENST00000476590 RNF7Q9UBF6 113 aa3.2□□□□□ -1.9
CD55-208ENST00000476590 LSM7Q9UK45 103 aaKnown RBP3.2□□□□□ -1.9
CD55-208ENST00000476590 TCF20Q9UGU0 1960 aaKnown RBP3.2□□□□□ -1.9
CD55-208ENST00000476590 TRAV40A0A0B4J280 105 aa3.19□□□□□ -1.9
CD55-208ENST00000476590 A0A0B4J2C4 111 aa3.19□□□□□ -1.9
CD55-208ENST00000476590 IGKV1-6A0A0C4DH72 117 aa3.19□□□□□ -1.9
CD55-208ENST00000476590 LINC01546A6NGU7 62 aa3.19□□□□□ -1.9
CD55-208ENST00000476590 FOXS1O43638 330 aa3.19□□□□□ -1.9
CD55-208ENST00000476590 CFC1BP0CG36 223 aa3.19□□□□□ -1.9
CD55-208ENST00000476590 CFC1P0CG37 223 aa3.19□□□□□ -1.9
CD55-208ENST00000476590 MSMPQ1L6U9 139 aa3.19□□□□□ -1.9
CD55-208ENST00000476590 ZNF497Q6ZNH5 498 aa3.19□□□□□ -1.9
CD55-208ENST00000476590 CD177Q8N6Q3 437 aa3.19□□□□□ -1.9
CD55-208ENST00000476590 LYZL4Q96KX0 146 aa3.19□□□□□ -1.9
CD55-208ENST00000476590 TMEM243Q9BU79 118 aa3.19□□□□□ -1.9
CD55-208ENST00000476590 DYNLRB1Q9NP97 96 aa3.19□□□□□ -1.9
CD55-208ENST00000476590 MYOFQ9NZM1 2061 aa3.19□□□□□ -1.9
CD55-208ENST00000476590 COL4A5P29400 1685 aa3.19□□□□□ -1.9
CD55-208ENST00000476590 TRBV7-1A0A0A6YYK4 115 aa3.19□□□□□ -1.9
CD55-208ENST00000476590 IGKV1-8A0A0C4DH67 115 aa3.19□□□□□ -1.9
CD55-208ENST00000476590 D6R8Y8 96 aa3.19□□□□□ -1.9
CD55-208ENST00000476590 FXYD7P58549 80 aa3.19□□□□□ -1.9
CD55-208ENST00000476590 NSUN5P1Q3KNT7 163 aa3.19□□□□□ -1.9
CD55-208ENST00000476590 SCGB1D4Q6XE38 83 aa3.19□□□□□ -1.9
CD55-208ENST00000476590 C9orf139Q6ZV77 190 aa3.19□□□□□ -1.9
CD55-208ENST00000476590 ZNF329Q86UD4 541 aa3.19□□□□□ -1.9
CD55-208ENST00000476590 PROK2Q9HC23 129 aa3.19□□□□□ -1.9
CD55-208ENST00000476590 MYO7AQ13402 2215 aa3.19□□□□□ -1.9
CD55-208ENST00000476590 IGKV1D-43A0A0B4J1Z2 117 aa3.18□□□□□ -1.9
CD55-208ENST00000476590 IGLV2-14P01704 120 aa3.18□□□□□ -1.9
CD55-208ENST00000476590 IGHV3-33P01772 117 aa3.18□□□□□ -1.9
CD55-208ENST00000476590 LOXP28300 417 aaPredicted RBP3.18□□□□□ -1.9
CD55-208ENST00000476590 FGF12P61328 243 aa3.18□□□□□ -1.9
CD55-208ENST00000476590 ERCC8Q13216 396 aa3.18□□□□□ -1.9
CD55-208ENST00000476590 FHL2Q14192 279 aa3.18□□□□□ -1.9
CD55-208ENST00000476590 ORMDL2Q53FV1 153 aa3.18□□□□□ -1.9
CD55-208ENST00000476590 FOXL2NBQ6ZUU3 175 aa3.18□□□□□ -1.9
CD55-208ENST00000476590 SMCR5Q8TEV8 140 aa3.18□□□□□ -1.9
CD55-208ENST00000476590 DAZ1Q9NQZ3 744 aaKnown RBP3.18□□□□□ -1.9
CD55-208ENST00000476590 MRPL35Q9NZE8 188 aaKnown RBP3.18□□□□□ -1.9
CD55-208ENST00000476590 Q9UF83 564 aa3.18□□□□□ -1.9
CD55-208ENST00000476590 LRP4O75096 1905 aa3.18□□□□□ -1.9
CD55-208ENST00000476590 TET1Q8NFU7 2136 aa3.18□□□□□ -1.9
CD55-208ENST00000476590 IGKV1-27A0A075B6S5 117 aa3.18□□□□□ -1.9
CD55-208ENST00000476590 TRBV6-6A0A0A6YYG2 114 aa3.18□□□□□ -1.9
CD55-208ENST00000476590 IGKV1-12A0A0C4DH73 117 aa3.18□□□□□ -1.9
CD55-208ENST00000476590 ZNF815PA8K554 130 aa3.18□□□□□ -1.9
CD55-208ENST00000476590 H7C423 109 aa3.18□□□□□ -1.9
CD55-208ENST00000476590 CCL21O00585 134 aa3.18□□□□□ -1.9
CD55-208ENST00000476590 IGKV1D-12P01611 117 aa3.18□□□□□ -1.9
CD55-208ENST00000476590 IGHV4-39P01824 125 aa3.18□□□□□ -1.9
CD55-208ENST00000476590 ARMS2P0C7Q2 107 aa3.18□□□□□ -1.9
CD55-208ENST00000476590 ITLN1Q8WWA0 313 aa3.18□□□□□ -1.9
CD55-208ENST00000476590 FMC1Q96HJ9 113 aa3.18□□□□□ -1.9
CD55-208ENST00000476590 SLC25A15Q9Y619 301 aa3.18□□□□□ -1.9
CD55-208ENST00000476590 EML6Q6ZMW3 1958 aa3.18□□□□□ -1.9
CD55-208ENST00000476590 TRBV30A0A0K0K1B3 111 aa3.17□□□□□ -1.9
CD55-208ENST00000476590 KRTAP29-1A8MX34 341 aaPredicted RBP3.17□□□□□ -1.9
CD55-208ENST00000476590 H3BTX0 84 aa3.17□□□□□ -1.9
CD55-208ENST00000476590 DAZ2Q13117 558 aaKnown RBP3.17□□□□□ -1.9
CD55-208ENST00000476590 LINC00322Q6ZN03 302 aaPredicted RBP3.17□□□□□ -1.9
CD55-208ENST00000476590 LINC00305Q7Z4B0 112 aa3.17□□□□□ -1.9
CD55-208ENST00000476590 DAZ4Q86SG3 579 aaKnown RBP3.17□□□□□ -1.9
CD55-208ENST00000476590 TSACCQ96A04 125 aaPredicted RBP3.17□□□□□ -1.9
CD55-208ENST00000476590 S1PR3Q99500 378 aa3.17□□□□□ -1.9
CD55-208ENST00000476590 EMC6Q9BV81 110 aa3.17□□□□□ -1.9
CD55-208ENST00000476590 DAZ3Q9NR90 486 aaKnown RBP3.17□□□□□ -1.9
CD55-208ENST00000476590 C2orf16Q68DN1 1984 aa3.17□□□□□ -1.9
CD55-208ENST00000476590 ADAMTS20P59510 1910 aa3.17□□□□□ -1.9
CD55-208ENST00000476590 TRAV12-1A0A0B4J245 112 aa3.17□□□□□ -1.9
CD55-208ENST00000476590 TRBV7-6A0A0J9YX20 115 aa3.17□□□□□ -1.9
CD55-208ENST00000476590 CXorf51AA0A1B0GTR3 108 aa3.17□□□□□ -1.9
CD55-208ENST00000476590 PLAC8L1A1L4L8 177 aa3.17□□□□□ -1.9
CD55-208ENST00000476590 IQCF6A8MYZ5 107 aa3.17□□□□□ -1.9
CD55-208ENST00000476590 F8VRH5 84 aa3.17□□□□□ -1.9
CD55-208ENST00000476590 BUB3O43684 328 aa3.17□□□□□ -1.9
CD55-208ENST00000476590 SS18L1O75177 396 aaPredicted RBP3.17□□□□□ -1.9
CD55-208ENST00000476590 NDUFA3O95167 84 aa3.17□□□□□ -1.9
CD55-208ENST00000476590 IGHV3-30P01768 117 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms