RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 CBY3A6NI87 242 aa3.21□□□□□ -1.9
VPS13D-206ENST00000476045 E7EUB6 86 aa3.21□□□□□ -1.9
VPS13D-206ENST00000476045 H3BTX0 84 aa3.21□□□□□ -1.9
VPS13D-206ENST00000476045 M0R143 59 aa3.21□□□□□ -1.9
VPS13D-206ENST00000476045 CORTO00230 105 aa3.21□□□□□ -1.9
VPS13D-206ENST00000476045 PEX7O00628 323 aa3.21□□□□□ -1.9
VPS13D-206ENST00000476045 TCAPO15273 167 aa3.21□□□□□ -1.9
VPS13D-206ENST00000476045 SLC25A17O43808 307 aa3.21□□□□□ -1.9
VPS13D-206ENST00000476045 SAP30O75446 220 aa3.21□□□□□ -1.9
VPS13D-206ENST00000476045 APCSP02743 223 aa3.21□□□□□ -1.9
VPS13D-206ENST00000476045 IGKV2-30P06310 120 aa3.21□□□□□ -1.9
VPS13D-206ENST00000476045 APELAP0DMC3 54 aa3.21□□□□□ -1.9
VPS13D-206ENST00000476045 LGALS7P47929 136 aa3.21□□□□□ -1.9
VPS13D-206ENST00000476045 RAB9AP51151 201 aa3.21□□□□□ -1.9
VPS13D-206ENST00000476045 SSTP61278 116 aa3.21□□□□□ -1.9
VPS13D-206ENST00000476045 PAFAH1B2P68402 229 aa3.21□□□□□ -1.9
VPS13D-206ENST00000476045 NDPQ00604 133 aa3.21□□□□□ -1.9
VPS13D-206ENST00000476045 WT1-ASQ06250 92 aa3.21□□□□□ -1.9
VPS13D-206ENST00000476045 BATFQ16520 125 aa3.21□□□□□ -1.9
VPS13D-206ENST00000476045 TDRG1Q3Y452 100 aa3.21□□□□□ -1.9
VPS13D-206ENST00000476045 VMA21Q3ZAQ7 101 aa3.21□□□□□ -1.9
VPS13D-206ENST00000476045 C10orf113Q5VZT2 155 aa3.21□□□□□ -1.9
VPS13D-206ENST00000476045 LCN12Q6JVE5 192 aa3.21□□□□□ -1.9
VPS13D-206ENST00000476045 PRR27Q6MZM9 219 aa3.21□□□□□ -1.9
VPS13D-206ENST00000476045 WDR73Q6P4I2 378 aa3.21□□□□□ -1.9
VPS13D-206ENST00000476045 PATE2Q6UY27 113 aa3.21□□□□□ -1.9
VPS13D-206ENST00000476045 ZNF562Q6V9R5 426 aa3.21□□□□□ -1.9
VPS13D-206ENST00000476045 C18orf65Q6ZTR6 163 aa3.21□□□□□ -1.9
VPS13D-206ENST00000476045 OR2K2Q8NGT1 345 aa3.21□□□□□ -1.9
VPS13D-206ENST00000476045 OR5B3Q8NH48 314 aa3.21□□□□□ -1.9
VPS13D-206ENST00000476045 OSR1Q8TAX0 266 aaPredicted RBP3.21□□□□□ -1.9
VPS13D-206ENST00000476045 TMEM167AQ8TBQ9 72 aa3.21□□□□□ -1.9
VPS13D-206ENST00000476045 VN1R17PQ8TDU5 208 aa3.21□□□□□ -1.9
VPS13D-206ENST00000476045 BLNKQ8WV28 456 aa3.21□□□□□ -1.9
VPS13D-206ENST00000476045 GRAMD2BQ96HH9 432 aa3.21□□□□□ -1.9
VPS13D-206ENST00000476045 SGK494Q96LW2 274 aa3.21□□□□□ -1.9
VPS13D-206ENST00000476045 IGF2BP2-AS1Q96M15 143 aa3.21□□□□□ -1.9
VPS13D-206ENST00000476045 RNF2Q99496 336 aa3.21□□□□□ -1.9
VPS13D-206ENST00000476045 SNHG12Q9BXW3 62 aa3.21□□□□□ -1.9
VPS13D-206ENST00000476045 MRPL32Q9BYC8 188 aaKnown RBP3.21□□□□□ -1.9
VPS13D-206ENST00000476045 FNDC4Q9H6D8 234 aaPredicted RBP3.21□□□□□ -1.9
VPS13D-206ENST00000476045 DNAJC4Q9NNZ3 241 aa3.21□□□□□ -1.9
VPS13D-206ENST00000476045 NDUFA4L2Q9NRX3 87 aa3.21□□□□□ -1.9
VPS13D-206ENST00000476045 PAM16Q9Y3D7 125 aa3.21□□□□□ -1.9
VPS13D-206ENST00000476045 RYR2Q92736 4967 aa3.21□□□□□ -1.9
VPS13D-206ENST00000476045 STARD9Q9P2P6 4700 aa3.21□□□□□ -1.9
VPS13D-206ENST00000476045 IGKV1D-37A0A075B6S9 117 aa3.2□□□□□ -1.9
VPS13D-206ENST00000476045 TRBV9A0A0B4J1U6 114 aa3.2□□□□□ -1.9
VPS13D-206ENST00000476045 KIR2DL5BA0A0G2JN68 375 aa3.2□□□□□ -1.9
VPS13D-206ENST00000476045 KIR2DL5BA0A0G2JPC4 375 aa3.2□□□□□ -1.9
VPS13D-206ENST00000476045 A0A1W2PRE2 83 aa3.2□□□□□ -1.9
VPS13D-206ENST00000476045 PGPA6NDG6 321 aa3.2□□□□□ -1.9
VPS13D-206ENST00000476045 FAM223BA6NKX1 122 aa3.2□□□□□ -1.9
VPS13D-206ENST00000476045 G3V318 75 aa3.2□□□□□ -1.9
VPS13D-206ENST00000476045 BMPR1BO00238 502 aa3.2□□□□□ -1.9
VPS13D-206ENST00000476045 ISLRO14498 428 aa3.2□□□□□ -1.9
VPS13D-206ENST00000476045 ZNF253O75346 499 aa3.2□□□□□ -1.9
VPS13D-206ENST00000476045 IGLV2-23P01705 113 aa3.2□□□□□ -1.9
VPS13D-206ENST00000476045 TRGV3P03979 118 aa3.2□□□□□ -1.9
VPS13D-206ENST00000476045 SLC25A5P05141 298 aaKnown RBP3.2□□□□□ -1.9
VPS13D-206ENST00000476045 PRB4P10163 310 aaPredicted RBP3.2□□□□□ -1.9
VPS13D-206ENST00000476045 GP9P14770 177 aa3.2□□□□□ -1.9
VPS13D-206ENST00000476045 ORM2P19652 201 aa3.2□□□□□ -1.9
VPS13D-206ENST00000476045 NTF3P20783 257 aa3.2□□□□□ -1.9
VPS13D-206ENST00000476045 CNTFRP26992 372 aa3.2□□□□□ -1.9
VPS13D-206ENST00000476045 SRIP30626 198 aa3.2□□□□□ -1.9
VPS13D-206ENST00000476045 RPL27AP46776 148 aaKnown RBP3.2□□□□□ -1.9
VPS13D-206ENST00000476045 AMTP48728 403 aa3.2□□□□□ -1.9
VPS13D-206ENST00000476045 SUB1P53999 127 aaKnown RBP eCLIP3.2□□□□□ -1.9
VPS13D-206ENST00000476045 MFAP2P55001 183 aa3.2□□□□□ -1.9
VPS13D-206ENST00000476045 ATP5IP56385 69 aaPredicted RBP3.2□□□□□ -1.9
VPS13D-206ENST00000476045 NUTF2P61970 127 aaKnown RBP3.2□□□□□ -1.9
VPS13D-206ENST00000476045 RANP62826 216 aaKnown RBP3.2□□□□□ -1.9
VPS13D-206ENST00000476045 CX3CL1P78423 397 aa3.2□□□□□ -1.9
VPS13D-206ENST00000476045 RPL19P84098 196 aaKnown RBP3.2□□□□□ -1.9
VPS13D-206ENST00000476045 Q0VG73 95 aa3.2□□□□□ -1.9
VPS13D-206ENST00000476045 TNXAQ16473 311 aa3.2□□□□□ -1.9
VPS13D-206ENST00000476045 IBA57Q5T440 356 aaKnown RBP3.2□□□□□ -1.9
VPS13D-206ENST00000476045 C10orf25Q5T742 122 aa3.2□□□□□ -1.9
VPS13D-206ENST00000476045 GDF5OSQ5U4N7 250 aa3.2□□□□□ -1.9
VPS13D-206ENST00000476045 UNQ5815/PRO19632Q6UWF5 114 aa3.2□□□□□ -1.9
VPS13D-206ENST00000476045 GTSCR1Q86UQ5 136 aa3.2□□□□□ -1.9
VPS13D-206ENST00000476045 PPP1R27Q86WC6 154 aa3.2□□□□□ -1.9
VPS13D-206ENST00000476045 FAM223AQ8IWN6 122 aa3.2□□□□□ -1.9
VPS13D-206ENST00000476045 KIR2DL5AQ8N109 375 aa3.2□□□□□ -1.9
VPS13D-206ENST00000476045 OR1L4Q8NGR5 311 aa3.2□□□□□ -1.9
VPS13D-206ENST00000476045 OR1B1Q8NGR6 318 aa3.2□□□□□ -1.9
VPS13D-206ENST00000476045 OR4A5Q8NH83 315 aa3.2□□□□□ -1.9
VPS13D-206ENST00000476045 VSTM2AQ8TAG5 236 aa3.2□□□□□ -1.9
VPS13D-206ENST00000476045 MUC7Q8TAX7 377 aa3.2□□□□□ -1.9
VPS13D-206ENST00000476045 CACNG8Q8WXS5 425 aa3.2□□□□□ -1.9
VPS13D-206ENST00000476045 USMG5Q96IX5 58 aa3.2□□□□□ -1.9
VPS13D-206ENST00000476045 RCHY1Q96PM5 261 aa3.2□□□□□ -1.9
VPS13D-206ENST00000476045 DUX3Q96PT4 197 aa3.2□□□□□ -1.9
VPS13D-206ENST00000476045 VAMP8Q9BV40 100 aa3.2□□□□□ -1.9
VPS13D-206ENST00000476045 GNB1LQ9BYB4 327 aa3.2□□□□□ -1.9
VPS13D-206ENST00000476045 FBXL15Q9H469 300 aa3.2□□□□□ -1.9
VPS13D-206ENST00000476045 NRN1Q9NPD7 142 aa3.2□□□□□ -1.9
VPS13D-206ENST00000476045 ZNF331Q9NQX6 463 aaPredicted RBP3.2□□□□□ -1.9
VPS13D-206ENST00000476045 ZNF586Q9NXT0 402 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms