RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 MORN5Q5VZ52 161 aa8.74□□□□□ -1.01
VAPB-204ENST00000475243 C2orf66Q6UXQ4 117 aa8.74□□□□□ -1.01
VAPB-204ENST00000475243 TMEM243Q9BU79 118 aa8.74□□□□□ -1.01
VAPB-204ENST00000475243 GFRA4Q9GZZ7 299 aa8.74□□□□□ -1.01
VAPB-204ENST00000475243 U3KQA8 63 aa8.74□□□□□ -1.01
VAPB-204ENST00000475243 NDUFS7O75251 213 aa8.74□□□□□ -1.01
VAPB-204ENST00000475243 ZNF106Q9H2Y7 1883 aaKnown RBP8.74□□□□□ -1.01
VAPB-204ENST00000475243 LMO1P25800 156 aa8.74□□□□□ -1.01
VAPB-204ENST00000475243 LOXP28300 417 aaPredicted RBP8.74□□□□□ -1.01
VAPB-204ENST00000475243 PRSS46E5RG02 174 aa8.74□□□□□ -1.01
VAPB-204ENST00000475243 ZNF134P52741 427 aa8.73□□□□□ -1.01
VAPB-204ENST00000475243 YPEL3P61236 119 aaPredicted RBP8.73□□□□□ -1.01
VAPB-204ENST00000475243 PCDH15Q96QU1 1955 aa8.73□□□□□ -1.01
VAPB-204ENST00000475243 SDHAF1A6NFY7 115 aa8.73□□□□□ -1.01
VAPB-204ENST00000475243 DEFB136Q30KP8 78 aa8.73□□□□□ -1.01
VAPB-204ENST00000475243 HAPLN4Q86UW8 402 aa8.73□□□□□ -1.01
VAPB-204ENST00000475243 OVOL2Q9BRP0 275 aa8.73□□□□□ -1.01
VAPB-204ENST00000475243 SORL1Q92673 2214 aa8.73□□□□□ -1.01
VAPB-204ENST00000475243 IGLV2-23P01705 113 aa8.73□□□□□ -1.01
VAPB-204ENST00000475243 TMEM190Q8WZ59 177 aa8.73□□□□□ -1.01
VAPB-204ENST00000475243 ZNF124Q15973 351 aa8.73□□□□□ -1.01
VAPB-204ENST00000475243 A0A0J9YY99 117 aa8.73□□□□□ -1.01
VAPB-204ENST00000475243 FAM104BQ5XKR9 115 aa8.73□□□□□ -1.01
VAPB-204ENST00000475243 ATP6V0BQ99437 205 aa8.73□□□□□ -1.01
VAPB-204ENST00000475243 J3QKU1 62 aa8.73□□□□□ -1.01
VAPB-204ENST00000475243 WT1-ASQ06250 92 aa8.73□□□□□ -1.01
VAPB-204ENST00000475243 HOXD3P31249 432 aaPredicted RBP8.72□□□□□ -1.01
VAPB-204ENST00000475243 HLA-DMBP28068 263 aa8.72□□□□□ -1.01
VAPB-204ENST00000475243 C18orf32Q8TCD1 76 aa8.72□□□□□ -1.01
VAPB-204ENST00000475243 RHODO00212 210 aa8.72□□□□□ -1.01
VAPB-204ENST00000475243 DLEU1O43261 78 aa8.72□□□□□ -1.01
VAPB-204ENST00000475243 VWC2Q2TAL6 325 aa8.72□□□□□ -1.01
VAPB-204ENST00000475243 TRAV12-1A0A0B4J245 112 aa8.72□□□□□ -1.01
VAPB-204ENST00000475243 GRNP28799 593 aaKnown RBP8.72□□□□□ -1.01
VAPB-204ENST00000475243 SLAQ13239 276 aa8.72□□□□□ -1.01
VAPB-204ENST00000475243 NDUFA4O00483 81 aa8.72□□□□□ -1.01
VAPB-204ENST00000475243 SPINK8P0C7L1 97 aa8.72□□□□□ -1.01
VAPB-204ENST00000475243 C17orf77Q96MU5 243 aa8.72□□□□□ -1.01
VAPB-204ENST00000475243 PRR25Q96S07 402 aa8.72□□□□□ -1.01
VAPB-204ENST00000475243 NOP10Q9NPE3 64 aaKnown RBP8.72□□□□□ -1.01
VAPB-204ENST00000475243 UBE2V1Q13404 147 aa8.72□□□□□ -1.01
VAPB-204ENST00000475243 SCRT2Q9NQ03 307 aa8.72□□□□□ -1.01
VAPB-204ENST00000475243 SPRY2O43597 315 aa8.71□□□□□ -1.01
VAPB-204ENST00000475243 Q8TCH9 128 aa8.71□□□□□ -1.01
VAPB-204ENST00000475243 ZC2HC1AQ96GY0 325 aa8.71□□□□□ -1.01
VAPB-204ENST00000475243 MUC6Q6W4X9 2439 aa8.71□□□□□ -1.01
VAPB-204ENST00000475243 F6UB75 175 aa8.71□□□□□ -1.02
VAPB-204ENST00000475243 RBMY1FQ15415 496 aaKnown RBP8.71□□□□□ -1.02
VAPB-204ENST00000475243 PRB1P04280 392 aa8.71□□□□□ -1.02
VAPB-204ENST00000475243 ZMAT4Q9H898 229 aa8.71□□□□□ -1.02
VAPB-204ENST00000475243 Q9HAA7 133 aa8.71□□□□□ -1.02
VAPB-204ENST00000475243 KLF5Q13887 457 aaPredicted RBP8.71□□□□□ -1.02
VAPB-204ENST00000475243 BDP1A6H8Y1 2624 aa8.71□□□□□ -1.02
VAPB-204ENST00000475243 PRSS29PA6NIE9 313 aa8.7□□□□□ -1.02
VAPB-204ENST00000475243 LHBP01229 141 aa8.7□□□□□ -1.02
VAPB-204ENST00000475243 Q8N8P6 123 aa8.7□□□□□ -1.02
VAPB-204ENST00000475243 IGHV4-59P01825 116 aa8.7□□□□□ -1.02
VAPB-204ENST00000475243 TMEM141Q96I45 108 aa8.7□□□□□ -1.02
VAPB-204ENST00000475243 WIPF3A6NGB9 483 aa8.7□□□□□ -1.02
VAPB-204ENST00000475243 GNRH2O43555 120 aa8.7□□□□□ -1.02
VAPB-204ENST00000475243 DEFB105AQ8NG35 78 aa8.7□□□□□ -1.02
VAPB-204ENST00000475243 POLR3KQ9Y2Y1 108 aaPredicted RBP8.7□□□□□ -1.02
VAPB-204ENST00000475243 ZFHX2Q9C0A1 2572 aaPredicted RBP8.7□□□□□ -1.02
VAPB-204ENST00000475243 TNRC6AQ8NDV7 1962 aaKnown RBP8.7□□□□□ -1.02
VAPB-204ENST00000475243 DSCAMO60469 2012 aa8.7□□□□□ -1.02
VAPB-204ENST00000475243 SPG11Q96JI7 2443 aa8.7□□□□□ -1.02
VAPB-204ENST00000475243 IGHV1-24A0A0C4DH33 117 aa8.7□□□□□ -1.02
VAPB-204ENST00000475243 ZNF726P1Q15940 193 aa8.7□□□□□ -1.02
VAPB-204ENST00000475243 H3BMM0 161 aa8.7□□□□□ -1.02
VAPB-204ENST00000475243 XCL1P47992 114 aa8.7□□□□□ -1.02
VAPB-204ENST00000475243 PTPN13Q12923 2485 aa8.7□□□□□ -1.02
VAPB-204ENST00000475243 IGFL3Q6UXB1 125 aa8.7□□□□□ -1.02
VAPB-204ENST00000475243 UBE2WQ96B02 151 aa8.7□□□□□ -1.02
VAPB-204ENST00000475243 FAM231BA6NCW3 169 aa8.7□□□□□ -1.02
VAPB-204ENST00000475243 C15orf65H3BRN8 121 aa8.7□□□□□ -1.02
VAPB-204ENST00000475243 CEP192Q8TEP8 1941 aa8.7□□□□□ -1.02
VAPB-204ENST00000475243 H3BRN7 92 aa8.69□□□□□ -1.02
VAPB-204ENST00000475243 SOCS3O14543 225 aa8.69□□□□□ -1.02
VAPB-204ENST00000475243 FGF6P10767 208 aa8.69□□□□□ -1.02
VAPB-204ENST00000475243 OTOGLQ3ZCN5 2332 aa8.69□□□□□ -1.02
VAPB-204ENST00000475243 DEFB112Q30KQ8 113 aa8.69□□□□□ -1.02
VAPB-204ENST00000475243 Q6ZQT7 251 aa8.69□□□□□ -1.02
VAPB-204ENST00000475243 IGKV1OR2-108A0A075B7D4 117 aa8.69□□□□□ -1.02
VAPB-204ENST00000475243 E9PQ18 207 aa8.69□□□□□ -1.02
VAPB-204ENST00000475243 NDUFS6O75380 124 aaKnown RBP8.69□□□□□ -1.02
VAPB-204ENST00000475243 HAMPP81172 84 aa8.69□□□□□ -1.02
VAPB-204ENST00000475243 ZNF492Q9P255 531 aa8.69□□□□□ -1.02
VAPB-204ENST00000475243 COX11Q9Y6N1 276 aa8.69□□□□□ -1.02
VAPB-204ENST00000475243 CCL24O00175 119 aa8.69□□□□□ -1.02
VAPB-204ENST00000475243 TAL2Q16559 108 aa8.69□□□□□ -1.02
VAPB-204ENST00000475243 SIGLEC8Q9NYZ4 499 aa8.69□□□□□ -1.02
VAPB-204ENST00000475243 FAM215AQ9Y5M1 114 aa8.69□□□□□ -1.02
VAPB-204ENST00000475243 HOXB4P17483 251 aaPredicted RBP8.69□□□□□ -1.02
VAPB-204ENST00000475243 VOPP1Q96AW1 172 aa8.69□□□□□ -1.02
VAPB-204ENST00000475243 HCFC1P51610 2035 aa8.69□□□□□ -1.02
VAPB-204ENST00000475243 IGKV2D-24A0A075B6R9 120 aa8.68□□□□□ -1.02
VAPB-204ENST00000475243 IGHV7-4-1A0A0J9YVY3 117 aa8.68□□□□□ -1.02
VAPB-204ENST00000475243 CD5LO43866 347 aa8.68□□□□□ -1.02
VAPB-204ENST00000475243 RSPO1Q2MKA7 263 aaPredicted RBP8.68□□□□□ -1.02
VAPB-204ENST00000475243 APRG1Q8IVJ8 170 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms