RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 ZMAT4Q9H898 229 aa5.02□□□□□ -1.61
LIMD1-204ENST00000474665 GNG13Q9P2W3 67 aa5.02□□□□□ -1.61
LIMD1-204ENST00000474665 PSG8Q9UQ74 426 aa5.02□□□□□ -1.61
LIMD1-204ENST00000474665 IGHV3OR16-12A0A075B7B8 117 aa5.01□□□□□ -1.61
LIMD1-204ENST00000474665 TRAV12-3A0A0B4J271 114 aa5.01□□□□□ -1.61
LIMD1-204ENST00000474665 IGHV4-28A0A0C4DH34 117 aa5.01□□□□□ -1.61
LIMD1-204ENST00000474665 A0A0J9YWU9 116 aa5.01□□□□□ -1.61
LIMD1-204ENST00000474665 C7orf71A4D174 169 aa5.01□□□□□ -1.61
LIMD1-204ENST00000474665 ZNF705GA8MUZ8 300 aaPredicted RBP5.01□□□□□ -1.61
LIMD1-204ENST00000474665 C11orf94C9JXX5 98 aa5.01□□□□□ -1.61
LIMD1-204ENST00000474665 TEX46H3BTG2 121 aa5.01□□□□□ -1.61
LIMD1-204ENST00000474665 INSP01308 110 aa5.01□□□□□ -1.61
LIMD1-204ENST00000474665 IFNA7P01567 189 aa5.01□□□□□ -1.61
LIMD1-204ENST00000474665 HBE1P02100 147 aa5.01□□□□□ -1.61
LIMD1-204ENST00000474665 AMBPP02760 352 aa5.01□□□□□ -1.61
LIMD1-204ENST00000474665 BCL2P10415 239 aa5.01□□□□□ -1.61
LIMD1-204ENST00000474665 TSPOP30536 169 aa5.01□□□□□ -1.61
LIMD1-204ENST00000474665 RNASE4P34096 147 aaKnown RBP5.01□□□□□ -1.61
LIMD1-204ENST00000474665 LEPP41159 167 aa5.01□□□□□ -1.61
LIMD1-204ENST00000474665 ZNF80P51504 273 aaPredicted RBP5.01□□□□□ -1.61
LIMD1-204ENST00000474665 BLOC1S1P78537 153 aa5.01□□□□□ -1.61
LIMD1-204ENST00000474665 FLI1Q01543 452 aaPredicted RBP5.01□□□□□ -1.61
LIMD1-204ENST00000474665 TMEM78Q5T7P6 136 aa5.01□□□□□ -1.61
LIMD1-204ENST00000474665 ZNF575Q86XF7 245 aa5.01□□□□□ -1.61
LIMD1-204ENST00000474665 HIST1H2BAQ96A08 127 aa5.01□□□□□ -1.61
LIMD1-204ENST00000474665 C11orf52Q96A22 123 aa5.01□□□□□ -1.61
LIMD1-204ENST00000474665 DERL1Q9BUN8 251 aa5.01□□□□□ -1.61
LIMD1-204ENST00000474665 C11orf21Q9P2W6 132 aa5.01□□□□□ -1.61
LIMD1-204ENST00000474665 LENEPQ9Y5L5 61 aa5.01□□□□□ -1.61
LIMD1-204ENST00000474665 LOC102723971A0A1B0GUV8 181 aa5□□□□□ -1.61
LIMD1-204ENST00000474665 SERTM2A0A1B0GWG4 89 aa5□□□□□ -1.61
LIMD1-204ENST00000474665 F6UZH7 168 aa5□□□□□ -1.61
LIMD1-204ENST00000474665 LY6G6CO95867 125 aa5□□□□□ -1.61
LIMD1-204ENST00000474665 GPX1P07203 203 aa5□□□□□ -1.61
LIMD1-204ENST00000474665 CRIP1P50238 77 aa5□□□□□ -1.61
LIMD1-204ENST00000474665 PPT1P50897 306 aa5□□□□□ -1.61
LIMD1-204ENST00000474665 MEF2BQ02080 365 aaPredicted RBP5□□□□□ -1.61
LIMD1-204ENST00000474665 TMEM183BQ1AE95 376 aa5□□□□□ -1.61
LIMD1-204ENST00000474665 Q6AWC8 147 aa5□□□□□ -1.61
LIMD1-204ENST00000474665 COX8CQ7Z4L0 72 aa5□□□□□ -1.61
LIMD1-204ENST00000474665 PRNTQ86SH4 94 aa5□□□□□ -1.61
LIMD1-204ENST00000474665 Q86TA4 180 aa5□□□□□ -1.61
LIMD1-204ENST00000474665 TMEM75Q8N9X5 138 aa5□□□□□ -1.61
LIMD1-204ENST00000474665 C11orf68Q9H3H3 251 aaKnown RBP5□□□□□ -1.61
LIMD1-204ENST00000474665 MANBALQ9NQG1 85 aa5□□□□□ -1.61
LIMD1-204ENST00000474665 VPS13DQ5THJ4 4388 aa5□□□□□ -1.61
LIMD1-204ENST00000474665 ALMS1Q8TCU4 4167 aa4.99□□□□□ -1.61
LIMD1-204ENST00000474665 TRBV20OR9-2A0A075B6H5 130 aa4.99□□□□□ -1.61
LIMD1-204ENST00000474665 TRBV6-1A0A0K0K1D8 114 aa4.99□□□□□ -1.61
LIMD1-204ENST00000474665 RBFOX3A6NFN3 312 aa4.99□□□□□ -1.61
LIMD1-204ENST00000474665 C9JQL5 133 aa4.99□□□□□ -1.61
LIMD1-204ENST00000474665 H7BYZ3 331 aa4.99□□□□□ -1.61
LIMD1-204ENST00000474665 LTAP01374 205 aa4.99□□□□□ -1.61
LIMD1-204ENST00000474665 IGLV2-8P01709 118 aa4.99□□□□□ -1.61
LIMD1-204ENST00000474665 MIFP14174 115 aa4.99□□□□□ -1.61
LIMD1-204ENST00000474665 TAS2R60P59551 318 aa4.99□□□□□ -1.61
LIMD1-204ENST00000474665 ZNF506Q5JVG8 444 aa4.99□□□□□ -1.61
LIMD1-204ENST00000474665 TMEM256Q8N2U0 113 aa4.99□□□□□ -1.61
LIMD1-204ENST00000474665 C11orf72Q8NBR9 251 aa4.99□□□□□ -1.61
LIMD1-204ENST00000474665 RNASE8Q8TDE3 154 aaKnown RBP4.99□□□□□ -1.61
LIMD1-204ENST00000474665 LINC00476Q8WZB0 136 aa4.99□□□□□ -1.61
LIMD1-204ENST00000474665 ZC2HC1AQ96GY0 325 aa4.99□□□□□ -1.61
LIMD1-204ENST00000474665 LINC01587Q99440 93 aa4.99□□□□□ -1.61
LIMD1-204ENST00000474665 C20orf144Q9BQM9 153 aa4.99□□□□□ -1.61
LIMD1-204ENST00000474665 LINC00467Q9BRT7 94 aa4.99□□□□□ -1.61
LIMD1-204ENST00000474665 TCEAL7Q9BRU2 100 aa4.99□□□□□ -1.61
LIMD1-204ENST00000474665 MLST8Q9BVC4 326 aa4.99□□□□□ -1.61
LIMD1-204ENST00000474665 TREM1Q9NP99 234 aa4.99□□□□□ -1.61
LIMD1-204ENST00000474665 TP53TG3Q9ULZ0 132 aa4.99□□□□□ -1.61
LIMD1-204ENST00000474665 CELA1Q9UNI1 258 aa4.99□□□□□ -1.61
LIMD1-204ENST00000474665 GOLT1BQ9Y3E0 138 aa4.99□□□□□ -1.61
LIMD1-204ENST00000474665 RAB19A4D1S5 217 aa4.98□□□□□ -1.61
LIMD1-204ENST00000474665 SMIM9A6NGZ8 99 aa4.98□□□□□ -1.61
LIMD1-204ENST00000474665 GCGP01275 180 aa4.98□□□□□ -1.61
LIMD1-204ENST00000474665 MED14OSP0DP75 135 aa4.98□□□□□ -1.61
LIMD1-204ENST00000474665 AKR1C3P42330 323 aa4.98□□□□□ -1.61
LIMD1-204ENST00000474665 RPL35P42766 123 aaKnown RBP4.98□□□□□ -1.61
LIMD1-204ENST00000474665 SRSF3P84103 164 aaKnown RBP4.98□□□□□ -1.61
LIMD1-204ENST00000474665 NHLRC2Q8NBF2 726 aa4.98□□□□□ -1.61
LIMD1-204ENST00000474665 FMC1Q96HJ9 113 aa4.98□□□□□ -1.61
LIMD1-204ENST00000474665 FAM210AQ96ND0 272 aa4.98□□□□□ -1.61
LIMD1-204ENST00000474665 TMEM208Q9BTX3 173 aa4.98□□□□□ -1.61
LIMD1-204ENST00000474665 VAX2Q9UIW0 290 aa4.98□□□□□ -1.61
LIMD1-204ENST00000474665 DNAH10Q8IVF4 4471 aa4.98□□□□□ -1.61
LIMD1-204ENST00000474665 IGHV1OR15-1A0A075B7D0 117 aa4.97□□□□□ -1.61
LIMD1-204ENST00000474665 IGKV3D-20A0A0C4DH25 116 aa4.97□□□□□ -1.61
LIMD1-204ENST00000474665 PGPEP1LA6NFU8 196 aa4.97□□□□□ -1.61
LIMD1-204ENST00000474665 FBLL1A6NHQ2 334 aaKnown RBP4.97□□□□□ -1.61
LIMD1-204ENST00000474665 K7EQM0 130 aa4.97□□□□□ -1.61
LIMD1-204ENST00000474665 GNRH2O43555 120 aa4.97□□□□□ -1.61
LIMD1-204ENST00000474665 SRP19P09132 144 aaKnown RBP4.97□□□□□ -1.61
LIMD1-204ENST00000474665 HTN1P15515 57 aa4.97□□□□□ -1.61
LIMD1-204ENST00000474665 EMP1P54849 157 aa4.97□□□□□ -1.61
LIMD1-204ENST00000474665 NANOS2P60321 138 aaKnown RBP4.97□□□□□ -1.61
LIMD1-204ENST00000474665 RRN3P1Q2M238 152 aa4.97□□□□□ -1.61
LIMD1-204ENST00000474665 ZNF674Q2M3X9 581 aa4.97□□□□□ -1.61
LIMD1-204ENST00000474665 C12orf74Q32Q52 190 aa4.97□□□□□ -1.61
LIMD1-204ENST00000474665 TDRG1Q3Y452 100 aa4.97□□□□□ -1.61
LIMD1-204ENST00000474665 ANXA2RQ3ZCQ2 193 aa4.97□□□□□ -1.61
LIMD1-204ENST00000474665 TOR2AQ5JU69 321 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 214 ms