RNA–Protein interactions for RNA: ENST00000474584.5

RPGR-206, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,268 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-206ENST00000474584 ATP5LO75964 103 aa10.84□□□□□ -0.67
RPGR-206ENST00000474584 IGKCP01834 107 aa10.84□□□□□ -0.67
RPGR-206ENST00000474584 UFSP1Q6NVU6 142 aa10.84□□□□□ -0.67
RPGR-206ENST00000474584 MRPL53Q96EL3 112 aaKnown RBP10.84□□□□□ -0.67
RPGR-206ENST00000474584 JMJD8Q96S16 334 aa10.84□□□□□ -0.67
RPGR-206ENST00000474584 AGPAT4-IT1Q9H0P7 198 aa10.84□□□□□ -0.67
RPGR-206ENST00000474584 SMPXQ9UHP9 88 aa10.84□□□□□ -0.67
RPGR-206ENST00000474584 K7EP34 96 aa10.83□□□□□ -0.68
RPGR-206ENST00000474584 OR2K2Q8NGT1 345 aa10.83□□□□□ -0.68
RPGR-206ENST00000474584 TMEM158Q8WZ71 300 aa10.83□□□□□ -0.68
RPGR-206ENST00000474584 HIF1ANQ9NWT6 349 aa10.83□□□□□ -0.68
RPGR-206ENST00000474584 IGHV3OR16-13A0A075B7E8 117 aa10.83□□□□□ -0.68
RPGR-206ENST00000474584 TRBV7-1A0A0A6YYK4 115 aa10.83□□□□□ -0.68
RPGR-206ENST00000474584 IGHV3-74A0A0B4J1X5 117 aa10.83□□□□□ -0.68
RPGR-206ENST00000474584 GATA1P15976 413 aaPredicted RBP10.83□□□□□ -0.68
RPGR-206ENST00000474584 SAA4P35542 130 aa10.83□□□□□ -0.68
RPGR-206ENST00000474584 FOXC2Q99958 501 aa10.83□□□□□ -0.68
RPGR-206ENST00000474584 KLRB1Q12918 225 aa10.82□□□□□ -0.68
RPGR-206ENST00000474584 COTL1Q14019 142 aa10.82□□□□□ -0.68
RPGR-206ENST00000474584 C8orf86Q6ZUL3 223 aa10.82□□□□□ -0.68
RPGR-206ENST00000474584 RAB37Q96AX2 223 aa10.82□□□□□ -0.68
RPGR-206ENST00000474584 HIGD1BQ9P298 99 aa10.82□□□□□ -0.68
RPGR-206ENST00000474584 HHLA3Q9XRX5 114 aa10.82□□□□□ -0.68
RPGR-206ENST00000474584 UFC1Q9Y3C8 167 aa10.82□□□□□ -0.68
RPGR-206ENST00000474584 G3V318 75 aa10.82□□□□□ -0.68
RPGR-206ENST00000474584 DPM2O94777 84 aa10.82□□□□□ -0.68
RPGR-206ENST00000474584 TRGV3P03979 118 aa10.82□□□□□ -0.68
RPGR-206ENST00000474584 C11orf21Q9P2W6 132 aa10.82□□□□□ -0.68
RPGR-206ENST00000474584 IGLV2-18A0A075B6J9 118 aa10.81□□□□□ -0.68
RPGR-206ENST00000474584 IGKV2D-26A0A0A0MRZ7 120 aa10.81□□□□□ -0.68
RPGR-206ENST00000474584 TRAV8-2A0A0B4J237 113 aa10.81□□□□□ -0.68
RPGR-206ENST00000474584 NAA38Q9BRA0 125 aaKnown RBP10.81□□□□□ -0.68
RPGR-206ENST00000474584 RELNP78509 3460 aa10.81□□□□□ -0.68
RPGR-206ENST00000474584 IGHV3-49A0A0A0MS15 119 aa10.81□□□□□ -0.68
RPGR-206ENST00000474584 IGHV7-4-1A0A0J9YVY3 117 aa10.81□□□□□ -0.68
RPGR-206ENST00000474584 SMIM17P0DL12 118 aa10.81□□□□□ -0.68
RPGR-206ENST00000474584 SPANXN1Q5VSR9 72 aa10.81□□□□□ -0.68
RPGR-206ENST00000474584 C9orf47Q6ZRZ4 202 aa10.81□□□□□ -0.68
RPGR-206ENST00000474584 AJUBAQ96IF1 538 aa10.81□□□□□ -0.68
RPGR-206ENST00000474584 NBASA2RRP1 2371 aa10.8□□□□□ -0.68
RPGR-206ENST00000474584 A0A1W2PPM0 123 aa10.8□□□□□ -0.68
RPGR-206ENST00000474584 ZNF207O43670 478 aaKnown RBP10.8□□□□□ -0.68
RPGR-206ENST00000474584 GCSHP23434 173 aa10.8□□□□□ -0.68
RPGR-206ENST00000474584 LAGE3Q14657 143 aa10.8□□□□□ -0.68
RPGR-206ENST00000474584 TM4SF20Q53R12 229 aa10.8□□□□□ -0.68
RPGR-206ENST00000474584 OR5A1Q8NGJ0 315 aa10.8□□□□□ -0.68
RPGR-206ENST00000474584 MYOZ3Q8TDC0 251 aa10.8□□□□□ -0.68
RPGR-206ENST00000474584 CHAC1Q9BUX1 264 aa10.8□□□□□ -0.68
RPGR-206ENST00000474584 PRSS47A8MTI9 375 aa10.79□□□□□ -0.68
RPGR-206ENST00000474584 SMIM13P0DJ93 91 aa10.79□□□□□ -0.68
RPGR-206ENST00000474584 ZC2HC1BQ5TFG8 222 aa10.79□□□□□ -0.68
RPGR-206ENST00000474584 CENPVL3A0A0U1RRI6 287 aa10.79□□□□□ -0.68
RPGR-206ENST00000474584 TMEM8BA6NDV4 472 aa10.79□□□□□ -0.68
RPGR-206ENST00000474584 FABP2P12104 132 aa10.79□□□□□ -0.68
RPGR-206ENST00000474584 UCNP55089 124 aa10.79□□□□□ -0.68
RPGR-206ENST00000474584 NRACQ8N912 160 aa10.79□□□□□ -0.68
RPGR-206ENST00000474584 SPCS1Q9Y6A9 102 aa10.79□□□□□ -0.68
RPGR-206ENST00000474584 MED13LQ71F56 2210 aa10.78□□□□□ -0.68
RPGR-206ENST00000474584 IGHV4-4A0A075B6R2 117 aa10.78□□□□□ -0.68
RPGR-206ENST00000474584 TRAV26-2A0A0B4J265 109 aa10.78□□□□□ -0.68
RPGR-206ENST00000474584 LINC01548A6NM66 108 aa10.78□□□□□ -0.68
RPGR-206ENST00000474584 HLA-DRB4P13762 266 aa10.78□□□□□ -0.68
RPGR-206ENST00000474584 ATP5G2Q06055 141 aa10.78□□□□□ -0.68
RPGR-206ENST00000474584 GTSCR1Q86UQ5 136 aa10.78□□□□□ -0.68
RPGR-206ENST00000474584 C16orf92Q96LL3 132 aa10.78□□□□□ -0.68
RPGR-206ENST00000474584 HLA-DRB4X5D2U9 266 aa10.78□□□□□ -0.68
RPGR-206ENST00000474584 CACNA1BQ00975 2339 aa10.78□□□□□ -0.68
RPGR-206ENST00000474584 TMEM160Q9NX00 188 aa10.78□□□□□ -0.68
RPGR-206ENST00000474584 U3KQE9 123 aa10.78□□□□□ -0.68
RPGR-206ENST00000474584 TRBV25-1A0A075B6N4 114 aa10.77□□□□□ -0.69
RPGR-206ENST00000474584 NPFFO15130 113 aa10.77□□□□□ -0.69
RPGR-206ENST00000474584 C9orf139Q6ZV77 190 aa10.77□□□□□ -0.69
RPGR-206ENST00000474584 C5orf56Q8N8D9 126 aa10.77□□□□□ -0.69
RPGR-206ENST00000474584 TTTY13Q9BZ97 58 aa10.77□□□□□ -0.69
RPGR-206ENST00000474584 H3BVH4 76 aa10.77□□□□□ -0.69
RPGR-206ENST00000474584 EFNA4P52798 201 aa10.77□□□□□ -0.69
RPGR-206ENST00000474584 FXYD2P54710 66 aa10.77□□□□□ -0.69
RPGR-206ENST00000474584 SRSF1Q07955 248 aaKnown RBP eCLIP10.77□□□□□ -0.69
RPGR-206ENST00000474584 SAMD5Q5TGI4 173 aa10.77□□□□□ -0.69
RPGR-206ENST00000474584 MRAP2Q96G30 205 aa10.77□□□□□ -0.69
RPGR-206ENST00000474584 ATP6V0BQ99437 205 aa10.77□□□□□ -0.69
RPGR-206ENST00000474584 MEGF9Q9H1U4 602 aa10.77□□□□□ -0.69
RPGR-206ENST00000474584 MRPL35Q9NZE8 188 aaKnown RBP10.77□□□□□ -0.69
RPGR-206ENST00000474584 LENEPQ9Y5L5 61 aa10.77□□□□□ -0.69
RPGR-206ENST00000474584 TRAV40A0A0B4J280 105 aa10.76□□□□□ -0.69
RPGR-206ENST00000474584 A0A1W2PPR1 153 aa10.76□□□□□ -0.69
RPGR-206ENST00000474584 SAP30O75446 220 aa10.76□□□□□ -0.69
RPGR-206ENST00000474584 UBTD1Q9HAC8 227 aa10.76□□□□□ -0.69
RPGR-206ENST00000474584 FAM223BA6NKX1 122 aa10.75□□□□□ -0.69
RPGR-206ENST00000474584 PLNP26678 52 aa10.75□□□□□ -0.69
RPGR-206ENST00000474584 FAM223AQ8IWN6 122 aa10.75□□□□□ -0.69
RPGR-206ENST00000474584 SELENOKQ9Y6D0 94 aa10.75□□□□□ -0.69
RPGR-206ENST00000474584 A0A087WX48 190 aa10.75□□□□□ -0.69
RPGR-206ENST00000474584 TRAV41A0A0B4J266 112 aa10.75□□□□□ -0.69
RPGR-206ENST00000474584 SPTBN1Q01082 2364 aaKnown RBP10.75□□□□□ -0.69
RPGR-206ENST00000474584 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.74□□□□□ -0.69
RPGR-206ENST00000474584 GLMPQ8WWB7 406 aa10.74□□□□□ -0.69
RPGR-206ENST00000474584 SMIM2Q9BVW6 85 aa10.74□□□□□ -0.69
RPGR-206ENST00000474584 BPESC1Q9GZL8 116 aa10.74□□□□□ -0.69
RPGR-206ENST00000474584 MOB4Q9Y3A3 225 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms