RNA–Protein interactions for RNA: ENST00000474323.5

SAMM50-203, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 2,368 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-203ENST00000474323 CCL3L1P16619 93 aa11.36□□□□□ -0.59
SAMM50-203ENST00000474323 TRBV7-3A0A075B6L6 115 aa11.36□□□□□ -0.59
SAMM50-203ENST00000474323 M0R3E3 92 aa11.36□□□□□ -0.59
SAMM50-203ENST00000474323 CFAP126Q5VTH2 177 aa11.36□□□□□ -0.59
SAMM50-203ENST00000474323 ERG28Q9UKR5 140 aa11.36□□□□□ -0.59
SAMM50-203ENST00000474323 AGRNO00468 2067 aa11.36□□□□□ -0.59
SAMM50-203ENST00000474323 RBP4P02753 201 aa11.35□□□□□ -0.59
SAMM50-203ENST00000474323 IGLC6P0CF74 106 aa11.35□□□□□ -0.59
SAMM50-203ENST00000474323 PDE6HQ13956 83 aa11.35□□□□□ -0.59
SAMM50-203ENST00000474323 AAMDCQ9H7C9 122 aa11.35□□□□□ -0.59
SAMM50-203ENST00000474323 ACACBO00763 2458 aa11.35□□□□□ -0.59
SAMM50-203ENST00000474323 MRPS12O15235 138 aaKnown RBP11.35□□□□□ -0.59
SAMM50-203ENST00000474323 IGKV1-17P01599 117 aa11.35□□□□□ -0.59
SAMM50-203ENST00000474323 APELAP0DMC3 54 aa11.35□□□□□ -0.59
SAMM50-203ENST00000474323 LY6DQ14210 128 aa11.35□□□□□ -0.59
SAMM50-203ENST00000474323 Q6ZUT4 128 aa11.35□□□□□ -0.59
SAMM50-203ENST00000474323 PKDREJQ9NTG1 2253 aa11.35□□□□□ -0.59
SAMM50-203ENST00000474323 NCBP2LA6PVI3 153 aaKnown RBP11.34□□□□□ -0.59
SAMM50-203ENST00000474323 HOXA3O43365 443 aaPredicted RBP11.34□□□□□ -0.59
SAMM50-203ENST00000474323 IGHV1-46P01743 117 aa11.34□□□□□ -0.59
SAMM50-203ENST00000474323 MT-ATP8P03928 68 aa11.34□□□□□ -0.59
SAMM50-203ENST00000474323 EGR2P11161 476 aaPredicted RBP11.34□□□□□ -0.59
SAMM50-203ENST00000474323 CD40P25942 277 aa11.34□□□□□ -0.59
SAMM50-203ENST00000474323 TMEM200BQ69YZ2 307 aa11.34□□□□□ -0.59
SAMM50-203ENST00000474323 VKORC1Q9BQB6 163 aa11.34□□□□□ -0.59
SAMM50-203ENST00000474323 CNFNQ9BYD5 112 aa11.34□□□□□ -0.59
SAMM50-203ENST00000474323 RAB1BQ9H0U4 201 aa11.34□□□□□ -0.59
SAMM50-203ENST00000474323 MRPL35Q9NZE8 188 aaKnown RBP11.34□□□□□ -0.59
SAMM50-203ENST00000474323 I3L2K1 104 aa11.34□□□□□ -0.59
SAMM50-203ENST00000474323 ENSAO43768 121 aaKnown RBP11.34□□□□□ -0.59
SAMM50-203ENST00000474323 C3orf36Q3SXR2 165 aa11.34□□□□□ -0.59
SAMM50-203ENST00000474323 DLX4Q92988 240 aaPredicted RBP11.34□□□□□ -0.59
SAMM50-203ENST00000474323 CRYGBP07316 175 aa11.33□□□□□ -0.6
SAMM50-203ENST00000474323 HERV-K104P63124 156 aa11.33□□□□□ -0.6
SAMM50-203ENST00000474323 SRSF2Q01130 221 aaKnown RBP11.33□□□□□ -0.6
SAMM50-203ENST00000474323 MORN3Q6PF18 240 aaPredicted RBP11.33□□□□□ -0.6
SAMM50-203ENST00000474323 Q8N8P6 123 aa11.33□□□□□ -0.6
SAMM50-203ENST00000474323 MYOZ3Q8TDC0 251 aa11.33□□□□□ -0.6
SAMM50-203ENST00000474323 RPEQ96AT9 228 aa11.33□□□□□ -0.6
SAMM50-203ENST00000474323 FAM110AQ9BQ89 295 aa11.33□□□□□ -0.6
SAMM50-203ENST00000474323 ONECUT1Q9UBC0 465 aa11.33□□□□□ -0.6
SAMM50-203ENST00000474323 ANKHD1Q8IWZ3 2542 aaKnown RBP11.33□□□□□ -0.6
SAMM50-203ENST00000474323 PRB4P10163 310 aaPredicted RBP11.33□□□□□ -0.6
SAMM50-203ENST00000474323 PLNP26678 52 aa11.33□□□□□ -0.6
SAMM50-203ENST00000474323 PPIFP30405 207 aaKnown RBP11.33□□□□□ -0.6
SAMM50-203ENST00000474323 SMCPP49901 116 aaPredicted RBP11.33□□□□□ -0.6
SAMM50-203ENST00000474323 NFE4Q86UQ8 179 aa11.33□□□□□ -0.6
SAMM50-203ENST00000474323 PRR25Q96S07 402 aa11.33□□□□□ -0.6
SAMM50-203ENST00000474323 A0A087WX48 190 aa11.32□□□□□ -0.6
SAMM50-203ENST00000474323 XGP55808 180 aa11.32□□□□□ -0.6
SAMM50-203ENST00000474323 RNF183Q96D59 192 aa11.32□□□□□ -0.6
SAMM50-203ENST00000474323 SIGLEC9Q9Y336 463 aa11.32□□□□□ -0.6
SAMM50-203ENST00000474323 TEX22C9J3V5 150 aa11.32□□□□□ -0.6
SAMM50-203ENST00000474323 IL4P05112 153 aa11.32□□□□□ -0.6
SAMM50-203ENST00000474323 ZNF491Q8N8L2 437 aa11.32□□□□□ -0.6
SAMM50-203ENST00000474323 IGLV2-18A0A075B6J9 118 aa11.31□□□□□ -0.6
SAMM50-203ENST00000474323 CCL21O00585 134 aa11.31□□□□□ -0.6
SAMM50-203ENST00000474323 GAS8-AS1O95177 125 aa11.31□□□□□ -0.6
SAMM50-203ENST00000474323 PRORYQ9H606 182 aa11.31□□□□□ -0.6
SAMM50-203ENST00000474323 MSRB1Q9NZV6 116 aa11.31□□□□□ -0.6
SAMM50-203ENST00000474323 SPTBN1Q01082 2364 aaKnown RBP11.31□□□□□ -0.6
SAMM50-203ENST00000474323 BSPH1Q075Z2 132 aa11.31□□□□□ -0.6
SAMM50-203ENST00000474323 PPDPFLQ8WWR9 84 aa11.31□□□□□ -0.6
SAMM50-203ENST00000474323 ABCA1O95477 2261 aa11.3□□□□□ -0.6
SAMM50-203ENST00000474323 IGHV3-72A0A0B4J1Y9 119 aa11.3□□□□□ -0.6
SAMM50-203ENST00000474323 MYMXA0A1B0GTQ4 84 aa11.3□□□□□ -0.6
SAMM50-203ENST00000474323 FHL3Q13643 280 aa11.3□□□□□ -0.6
SAMM50-203ENST00000474323 ZNF575Q86XF7 245 aa11.3□□□□□ -0.6
SAMM50-203ENST00000474323 HIVEP3Q5T1R4 2406 aa11.3□□□□□ -0.6
SAMM50-203ENST00000474323 FAM90A27PA6NNH2 459 aa11.3□□□□□ -0.6
SAMM50-203ENST00000474323 PPP1R27Q86WC6 154 aa11.3□□□□□ -0.6
SAMM50-203ENST00000474323 GAGE5Q13069 117 aa11.29□□□□□ -0.6
SAMM50-203ENST00000474323 GAGE6Q13070 117 aa11.29□□□□□ -0.6
SAMM50-203ENST00000474323 YAE1D1Q9NRH1 226 aa11.29□□□□□ -0.6
SAMM50-203ENST00000474323 CNTFRP26992 372 aa11.28□□□□□ -0.6
SAMM50-203ENST00000474323 LAGE3Q14657 143 aa11.28□□□□□ -0.6
SAMM50-203ENST00000474323 ANAPC13Q9BS18 74 aa11.28□□□□□ -0.6
SAMM50-203ENST00000474323 ABCA4P78363 2273 aa11.28□□□□□ -0.6
SAMM50-203ENST00000474323 IGKV2-40A0A087WW87 121 aaPredicted RBP11.28□□□□□ -0.6
SAMM50-203ENST00000474323 IGKV2D-40P01614 121 aaPredicted RBP11.28□□□□□ -0.6
SAMM50-203ENST00000474323 GATA3P23771 443 aa11.28□□□□□ -0.6
SAMM50-203ENST00000474323 ZNF80P51504 273 aaPredicted RBP11.28□□□□□ -0.6
SAMM50-203ENST00000474323 TEN1Q86WV5 123 aa11.28□□□□□ -0.6
SAMM50-203ENST00000474323 CFAP46Q8IYW2 2715 aa11.28□□□□□ -0.6
SAMM50-203ENST00000474323 FCN3O75636 299 aa11.27□□□□□ -0.6
SAMM50-203ENST00000474323 NDUFA3O95167 84 aa11.27□□□□□ -0.6
SAMM50-203ENST00000474323 LYRM7Q5U5X0 104 aa11.27□□□□□ -0.6
SAMM50-203ENST00000474323 DTX2Q86UW9 622 aa11.27□□□□□ -0.6
SAMM50-203ENST00000474323 NUP37Q8NFH4 326 aa11.27□□□□□ -0.6
SAMM50-203ENST00000474323 SRSF8Q9BRL6 282 aaKnown RBP11.27□□□□□ -0.6
SAMM50-203ENST00000474323 IGSF10Q6WRI0 2623 aa11.27□□□□□ -0.61
SAMM50-203ENST00000474323 TRAV12-1A0A0B4J245 112 aa11.27□□□□□ -0.61
SAMM50-203ENST00000474323 H7C1H1 209 aa11.27□□□□□ -0.61
SAMM50-203ENST00000474323 K7EIM0 57 aa11.27□□□□□ -0.61
SAMM50-203ENST00000474323 ORM1P02763 201 aa11.27□□□□□ -0.61
SAMM50-203ENST00000474323 GATA1P15976 413 aaPredicted RBP11.27□□□□□ -0.61
SAMM50-203ENST00000474323 GRNP28799 593 aaKnown RBP11.27□□□□□ -0.61
SAMM50-203ENST00000474323 PSMG3-AS1Q96PY0 264 aa11.27□□□□□ -0.61
SAMM50-203ENST00000474323 LRBAP50851 2863 aa11.26□□□□□ -0.61
SAMM50-203ENST00000474323 F8VRH5 84 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms