RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 SSTP61278 116 aa13.55□□□□□ -0.24
VARS2-206ENST00000473916 COA6Q5JTJ3 125 aaKnown RBP13.55□□□□□ -0.24
VARS2-206ENST00000473916 ZNF418Q8TF45 676 aaPredicted RBP13.55□□□□□ -0.24
VARS2-206ENST00000473916 AGRNO00468 2067 aa13.55□□□□□ -0.24
VARS2-206ENST00000473916 MUC21A0A0G2JKD1 596 aa13.54□□□□□ -0.24
VARS2-206ENST00000473916 MUC21A0A140T8X8 626 aa13.54□□□□□ -0.24
VARS2-206ENST00000473916 HBBP68871 147 aa13.54□□□□□ -0.24
VARS2-206ENST00000473916 HIST1H1AQ02539 215 aaPredicted RBP13.54□□□□□ -0.24
VARS2-206ENST00000473916 MUC21Q5SSG8 566 aa13.54□□□□□ -0.24
VARS2-206ENST00000473916 ATP5L2Q7Z4Y8 100 aa13.54□□□□□ -0.24
VARS2-206ENST00000473916 OR1N2Q8NGR9 330 aa13.54□□□□□ -0.24
VARS2-206ENST00000473916 CLEC5AQ9NY25 188 aa13.54□□□□□ -0.24
VARS2-206ENST00000473916 C11orf21Q9P2W6 132 aa13.54□□□□□ -0.24
VARS2-206ENST00000473916 FAM231BA6NCW3 169 aa13.54□□□□□ -0.24
VARS2-206ENST00000473916 HAX1O00165 279 aa13.54□□□□□ -0.24
VARS2-206ENST00000473916 APCSP02743 223 aa13.54□□□□□ -0.24
VARS2-206ENST00000473916 FOXA3P55318 350 aaPredicted RBP13.54□□□□□ -0.24
VARS2-206ENST00000473916 LINC00518Q8N0U6 118 aa13.54□□□□□ -0.24
VARS2-206ENST00000473916 DLX4Q92988 240 aaPredicted RBP13.54□□□□□ -0.24
VARS2-206ENST00000473916 INAFM1C9JVW0 142 aa13.53□□□□□ -0.24
VARS2-206ENST00000473916 FABP4P15090 132 aa13.53□□□□□ -0.24
VARS2-206ENST00000473916 LINC00310P59036 64 aa13.53□□□□□ -0.24
VARS2-206ENST00000473916 RASL11AQ6T310 242 aa13.53□□□□□ -0.24
VARS2-206ENST00000473916 FN1P02751 2386 aaKnown RBP13.53□□□□□ -0.24
VARS2-206ENST00000473916 ORM1P02763 201 aa13.52□□□□□ -0.24
VARS2-206ENST00000473916 ZNF688P0C7X2 276 aa13.52□□□□□ -0.24
VARS2-206ENST00000473916 CRISP2P16562 243 aa13.52□□□□□ -0.24
VARS2-206ENST00000473916 SRIP30626 198 aa13.52□□□□□ -0.24
VARS2-206ENST00000473916 KIR3DS1Q14943 382 aa13.52□□□□□ -0.24
VARS2-206ENST00000473916 COX19Q49B96 90 aa13.52□□□□□ -0.24
VARS2-206ENST00000473916 OR8A1Q8NGG7 326 aa13.52□□□□□ -0.24
VARS2-206ENST00000473916 OR10J6PQ8NGY7 276 aa13.52□□□□□ -0.24
VARS2-206ENST00000473916 DPF1Q92782 380 aa13.52□□□□□ -0.24
VARS2-206ENST00000473916 FABP5P3A8MUU1 101 aa13.52□□□□□ -0.25
VARS2-206ENST00000473916 OVOL1O14753 267 aa13.52□□□□□ -0.25
VARS2-206ENST00000473916 BMI1P35226 326 aa13.52□□□□□ -0.25
VARS2-206ENST00000473916 SCGB2A2Q13296 93 aa13.52□□□□□ -0.25
VARS2-206ENST00000473916 LYZL1Q6UWQ5 148 aa13.52□□□□□ -0.25
VARS2-206ENST00000473916 RAX2Q96IS3 184 aa13.52□□□□□ -0.25
VARS2-206ENST00000473916 HIST1H2BLQ99880 126 aa13.52□□□□□ -0.25
VARS2-206ENST00000473916 CITED2Q99967 270 aaPredicted RBP13.52□□□□□ -0.25
VARS2-206ENST00000473916 FLNBO75369 2602 aaKnown RBP13.52□□□□□ -0.25
VARS2-206ENST00000473916 CD33P20138 364 aa13.51□□□□□ -0.25
VARS2-206ENST00000473916 PSMG4Q5JS54 123 aa13.51□□□□□ -0.25
VARS2-206ENST00000473916 ZFAND2AQ8N6M9 145 aa13.51□□□□□ -0.25
VARS2-206ENST00000473916 WFDC12Q8WWY7 111 aa13.51□□□□□ -0.25
VARS2-206ENST00000473916 C16orf95Q9H693 158 aa13.51□□□□□ -0.25
VARS2-206ENST00000473916 NIPBLQ6KC79 2804 aaeCLIP13.5□□□□□ -0.25
VARS2-206ENST00000473916 IGKV3D-20A0A0C4DH25 116 aa13.5□□□□□ -0.25
VARS2-206ENST00000473916 A0A1B0GUT8 65 aa13.5□□□□□ -0.25
VARS2-206ENST00000473916 K7EQG2 157 aa13.5□□□□□ -0.25
VARS2-206ENST00000473916 AMBPP02760 352 aa13.5□□□□□ -0.25
VARS2-206ENST00000473916 OR10D4PQ8NGN7 298 aa13.5□□□□□ -0.25
VARS2-206ENST00000473916 OR9G4Q8NGQ1 327 aa13.5□□□□□ -0.25
VARS2-206ENST00000473916 PPP1R14DQ9NXH3 145 aa13.5□□□□□ -0.25
VARS2-206ENST00000473916 S100A2P29034 98 aa13.49□□□□□ -0.25
VARS2-206ENST00000473916 SERF1AO75920 110 aa13.49□□□□□ -0.25
VARS2-206ENST00000473916 ID1P41134 155 aa13.49□□□□□ -0.25
VARS2-206ENST00000473916 IQCJQ1A5X6 159 aa13.49□□□□□ -0.25
VARS2-206ENST00000473916 LINC01559Q495D7 138 aa13.49□□□□□ -0.25
VARS2-206ENST00000473916 LINC00477Q96M19 166 aa13.49□□□□□ -0.25
VARS2-206ENST00000473916 C12orf57Q99622 126 aa13.49□□□□□ -0.25
VARS2-206ENST00000473916 FAM19A4Q96LR4 140 aa13.48□□□□□ -0.25
VARS2-206ENST00000473916 RCHY1Q96PM5 261 aa13.48□□□□□ -0.25
VARS2-206ENST00000473916 S100A8P05109 93 aa13.47□□□□□ -0.25
VARS2-206ENST00000473916 CSN3P07498 182 aa13.47□□□□□ -0.25
VARS2-206ENST00000473916 IGLC6P0CF74 106 aa13.47□□□□□ -0.25
VARS2-206ENST00000473916 FER1L6-AS1Q8NA97 138 aa13.47□□□□□ -0.25
VARS2-206ENST00000473916 PACRGQ96M98 296 aaPredicted RBP13.47□□□□□ -0.25
VARS2-206ENST00000473916 M0QZ24 198 aa13.46□□□□□ -0.25
VARS2-206ENST00000473916 Q6AWC8 147 aa13.46□□□□□ -0.25
VARS2-206ENST00000473916 BAGE3Q86Y29 109 aa13.46□□□□□ -0.25
VARS2-206ENST00000473916 CTRLP40313 264 aa13.46□□□□□ -0.26
VARS2-206ENST00000473916 Q0VG73 95 aa13.46□□□□□ -0.26
VARS2-206ENST00000473916 RIGQ13278 110 aa13.46□□□□□ -0.26
VARS2-206ENST00000473916 TMEM61Q8N0U2 210 aa13.46□□□□□ -0.26
VARS2-206ENST00000473916 ALKBH7Q9BT30 221 aaPredicted RBP13.46□□□□□ -0.26
VARS2-206ENST00000473916 MSRB1Q9NZV6 116 aa13.46□□□□□ -0.26
VARS2-206ENST00000473916 RNF114Q9Y508 228 aa13.46□□□□□ -0.26
VARS2-206ENST00000473916 LENEPQ9Y5L5 61 aa13.46□□□□□ -0.26
VARS2-206ENST00000473916 IGKV3-20P01619 116 aa13.45□□□□□ -0.26
VARS2-206ENST00000473916 RNASE4P34096 147 aaKnown RBP13.45□□□□□ -0.26
VARS2-206ENST00000473916 RPS20P60866 119 aaKnown RBP13.45□□□□□ -0.26
VARS2-206ENST00000473916 FHL3Q13643 280 aa13.45□□□□□ -0.26
VARS2-206ENST00000473916 CDPF1Q6NVV7 123 aa13.45□□□□□ -0.26
VARS2-206ENST00000473916 C18orf32Q8TCD1 76 aa13.45□□□□□ -0.26
VARS2-206ENST00000473916 PEMTQ9UBM1 199 aa13.45□□□□□ -0.26
VARS2-206ENST00000473916 NAGKQ9UJ70 344 aa13.45□□□□□ -0.26
VARS2-206ENST00000473916 C2CD3Q4AC94 2353 aa13.45□□□□□ -0.26
VARS2-206ENST00000473916 CCL24O00175 119 aa13.44□□□□□ -0.26
VARS2-206ENST00000473916 SNRPD3P62318 126 aaKnown RBP13.44□□□□□ -0.26
VARS2-206ENST00000473916 PYY3Q5JQD4 70 aa13.44□□□□□ -0.26
VARS2-206ENST00000473916 GPX1P07203 203 aa13.44□□□□□ -0.26
VARS2-206ENST00000473916 PROK1P58294 105 aa13.44□□□□□ -0.26
VARS2-206ENST00000473916 CTAG1AP78358 180 aa13.44□□□□□ -0.26
VARS2-206ENST00000473916 SAMD13Q5VXD3 122 aa13.44□□□□□ -0.26
VARS2-206ENST00000473916 TSSC4Q9Y5U2 329 aaPredicted RBP13.44□□□□□ -0.26
VARS2-206ENST00000473916 LOC102724200A0A096LPH7 203 aaPredicted RBP13.43□□□□□ -0.26
VARS2-206ENST00000473916 BORCS7Q96B45 105 aa13.43□□□□□ -0.26
VARS2-206ENST00000473916 A0A0J9YX75 114 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms