RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 SRSF12Q8WXF0 261 aaKnown RBP0.98□□□□□ -2.25
CCDC39-203ENST00000473854 TMEM37Q8WXS4 190 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 RAB1CQ92928 201 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 LHX4Q969G2 390 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 RPEQ96AT9 228 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 PINX1Q96BK5 328 aaKnown RBP0.98□□□□□ -2.25
CCDC39-203ENST00000473854 RPUSD4Q96CM3 377 aaKnown RBP0.98□□□□□ -2.25
CCDC39-203ENST00000473854 FLYWCH2Q96CP2 140 aaKnown RBP0.98□□□□□ -2.25
CCDC39-203ENST00000473854 FXYD5Q96DB9 178 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 TVP23CQ96ET8 276 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 ACY3Q96HD9 319 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 SLC35E1Q96K37 410 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 OR4F4Q96R69 305 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 CCL19Q99731 98 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 SPAG8Q99932 426 aaPredicted RBP0.98□□□□□ -2.25
CCDC39-203ENST00000473854 HSPB9Q9BQS6 159 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 GGACTQ9BVM4 153 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 EIF5A2Q9GZV4 153 aaKnown RBP0.98□□□□□ -2.25
CCDC39-203ENST00000473854 RAB1BQ9H0U4 201 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 SLC35B3Q9H1N7 401 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 LPAR2Q9HBW0 351 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 MANBALQ9NQG1 85 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 SLC39A9Q9NUM3 307 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 DOK5Q9P104 306 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 METTL1Q9UBP6 276 aaKnown RBP0.98□□□□□ -2.25
CCDC39-203ENST00000473854 MIOXQ9UGB7 285 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 PRNDQ9UKY0 176 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 FUT9Q9Y231 359 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 SIGLEC9Q9Y336 463 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 AMMECR1Q9Y4X0 333 aaPredicted RBP0.98□□□□□ -2.25
CCDC39-203ENST00000473854 HILPDAQ9Y5L2 63 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 INSIG2Q9Y5U4 225 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 PUS1Q9Y606 427 aaKnown RBP eCLIP0.98□□□□□ -2.25
CCDC39-203ENST00000473854 F11RQ9Y624 299 aaKnown RBP0.98□□□□□ -2.25
CCDC39-203ENST00000473854 S4R3C0 116 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 ABCA13Q86UQ4 5058 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 TRBV24-1A0A075B6N3 115 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 A0A087WWC5 75 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 A0A0U1RRA0 63 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 CENPVL3A0A0U1RRI6 287 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 A0A1B0GUS0 222 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 TMEM89A2RUT3 159 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 CLPSL1A2RUU4 121 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 C9JCJ5 164 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 F2Z2F3 143 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 C17orf112F2Z3M2 114 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 TMEM250H0YL14 139 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 H3BRN7 92 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 M0R036 132 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 CORTO00230 105 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 NPFFO15130 113 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 ENSAO43768 121 aaKnown RBP0.97□□□□□ -2.25
CCDC39-203ENST00000473854 OR7C2O60412 319 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 HIST1H2BKO60814 126 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 NDUFS6O75380 124 aaKnown RBP0.97□□□□□ -2.25
CCDC39-203ENST00000473854 OR2J3O76001 311 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 CA1P00915 261 aaPredicted RBP0.97□□□□□ -2.25
CCDC39-203ENST00000473854 IFNA1P01562 189 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 IGKV1-17P01599 117 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 IGLV2-8P01709 118 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 TRBV12-3P01733 135 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 IGHV3-23P01764 117 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 HLA-DRB1P01911 266 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 MBP02144 154 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 HIST1H2BJP06899 126 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 PFN1P07737 140 aaKnown RBP0.97□□□□□ -2.25
CCDC39-203ENST00000473854 OR10J4P0C629 311 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 IGLC2P0DOY2 106 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 SFTPCP11686 197 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 RAB5AP20339 215 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 HIST1H2BOP23527 126 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 CRYBB3P26998 211 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 HLA-DMBP28068 263 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 HTR1DP28221 377 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 HIST1H2BBP33778 126 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 MAS1LP35410 378 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 GPX4P36969 197 aaPredicted RBP0.97□□□□□ -2.25
CCDC39-203ENST00000473854 TAGLN2P37802 199 aaKnown RBP0.97□□□□□ -2.25
CCDC39-203ENST00000473854 MYCNOSP40205 109 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 RPL35P42766 123 aaKnown RBP0.97□□□□□ -2.25
CCDC39-203ENST00000473854 GALR1P47211 349 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 PSMB3P49720 205 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 EFNA4P52798 201 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 ATP5J2P56134 94 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 HIST1H2BDP58876 126 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 HIST1H2BCP62807 126 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 UBE2L3P68036 154 aaKnown RBP0.97□□□□□ -2.25
CCDC39-203ENST00000473854 OR5I1Q13606 314 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 PEA15Q15121 130 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 ADIRFQ15847 76 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 USF2Q15853 346 aaPredicted RBP0.97□□□□□ -2.25
CCDC39-203ENST00000473854 SSX2Q16385 188 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 LY6EQ16553 131 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 HIST2H2BEQ16778 126 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 CLEC12BQ2HXU8 276 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 ACOT6Q3I5F7 207 aaPredicted RBP0.97□□□□□ -2.25
CCDC39-203ENST00000473854 VMA21Q3ZAQ7 101 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 TIGITQ495A1 244 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 SOHLH1Q5JUK2 328 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 ACTL10Q5JWF8 245 aa0.97□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms