RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 TRBV7-9A0A0J9YWB2 115 aa2.4□□□□□ -2.03
XRN1-209ENST00000472625 A0A0J9YY99 117 aa2.4□□□□□ -2.03
XRN1-209ENST00000472625 NAP1L6A6NFF2 107 aa2.4□□□□□ -2.03
XRN1-209ENST00000472625 FABP12A6NFH5 140 aa2.4□□□□□ -2.03
XRN1-209ENST00000472625 PMS2P5A8MQ11 134 aa2.4□□□□□ -2.03
XRN1-209ENST00000472625 CENPXA8MT69 81 aa2.4□□□□□ -2.03
XRN1-209ENST00000472625 C9JCJ5 164 aa2.4□□□□□ -2.03
XRN1-209ENST00000472625 PRSS46E5RG02 174 aa2.4□□□□□ -2.03
XRN1-209ENST00000472625 H3BP45 60 aa2.4□□□□□ -2.03
XRN1-209ENST00000472625 PSCAO43653 123 aa2.4□□□□□ -2.03
XRN1-209ENST00000472625 SSSCA1O60232 199 aa2.4□□□□□ -2.03
XRN1-209ENST00000472625 NDUFB4O95168 129 aa2.4□□□□□ -2.03
XRN1-209ENST00000472625 SFT2D2O95562 160 aa2.4□□□□□ -2.03
XRN1-209ENST00000472625 IGLV2-11P01706 119 aa2.4□□□□□ -2.03
XRN1-209ENST00000472625 HOXB5P09067 269 aa2.4□□□□□ -2.03
XRN1-209ENST00000472625 OR4E1P0C645 316 aa2.4□□□□□ -2.03
XRN1-209ENST00000472625 PVALBP20472 110 aaPredicted RBP2.4□□□□□ -2.03
XRN1-209ENST00000472625 SRIP30626 198 aa2.4□□□□□ -2.03
XRN1-209ENST00000472625 TMBIM6P55061 237 aa2.4□□□□□ -2.03
XRN1-209ENST00000472625 DEFB1P60022 68 aa2.4□□□□□ -2.03
XRN1-209ENST00000472625 HBG1P69891 147 aa2.4□□□□□ -2.03
XRN1-209ENST00000472625 HBG2P69892 147 aa2.4□□□□□ -2.03
XRN1-209ENST00000472625 ZNF415Q09FC8 603 aa2.4□□□□□ -2.03
XRN1-209ENST00000472625 MRPL23Q16540 153 aaKnown RBP2.4□□□□□ -2.03
XRN1-209ENST00000472625 TMEM78Q5T7P6 136 aa2.4□□□□□ -2.03
XRN1-209ENST00000472625 Q5VSD8 79 aa2.4□□□□□ -2.03
XRN1-209ENST00000472625 C10orf113Q5VZT2 155 aa2.4□□□□□ -2.03
XRN1-209ENST00000472625 NEGR1Q7Z3B1 354 aa2.4□□□□□ -2.03
XRN1-209ENST00000472625 STX12Q86Y82 276 aa2.4□□□□□ -2.03
XRN1-209ENST00000472625 EIF4E3Q8N5X7 224 aaKnown RBP2.4□□□□□ -2.03
XRN1-209ENST00000472625 MCFD2Q8NI22 146 aa2.4□□□□□ -2.03
XRN1-209ENST00000472625 ST6GAL2Q96JF0 529 aa2.4□□□□□ -2.03
XRN1-209ENST00000472625 SMIM8Q96KF7 97 aa2.4□□□□□ -2.03
XRN1-209ENST00000472625 ATP5SQ99766 215 aa2.4□□□□□ -2.03
XRN1-209ENST00000472625 VGLL1Q99990 258 aa2.4□□□□□ -2.03
XRN1-209ENST00000472625 TMEM70Q9BUB7 260 aa2.4□□□□□ -2.03
XRN1-209ENST00000472625 ZNF586Q9NXT0 402 aa2.4□□□□□ -2.03
XRN1-209ENST00000472625 PSENENQ9NZ42 101 aa2.4□□□□□ -2.03
XRN1-209ENST00000472625 MUC4Q99102 2169 aa2.4□□□□□ -2.03
XRN1-209ENST00000472625 HMCN2Q8NDA2 5059 aa2.39□□□□□ -2.03
XRN1-209ENST00000472625 AGRNO00468 2067 aa2.39□□□□□ -2.03
XRN1-209ENST00000472625 TRGV1A0A0A0MS02 117 aa2.39□□□□□ -2.03
XRN1-209ENST00000472625 C7orf71A4D174 169 aa2.39□□□□□ -2.03
XRN1-209ENST00000472625 KLLNB2CW77 178 aa2.39□□□□□ -2.03
XRN1-209ENST00000472625 L7N2F9 121 aa2.39□□□□□ -2.03
XRN1-209ENST00000472625 CIDEAO60543 219 aa2.39□□□□□ -2.03
XRN1-209ENST00000472625 MPDU1O75352 247 aa2.39□□□□□ -2.03
XRN1-209ENST00000472625 ZNF324O75467 553 aaPredicted RBP2.39□□□□□ -2.03
XRN1-209ENST00000472625 NXPH4O95158 308 aa2.39□□□□□ -2.03
XRN1-209ENST00000472625 C1QBP02746 253 aa2.39□□□□□ -2.03
XRN1-209ENST00000472625 SEC11BP0C7V7 166 aa2.39□□□□□ -2.03
XRN1-209ENST00000472625 IGLC2P0DOY2 106 aa2.39□□□□□ -2.03
XRN1-209ENST00000472625 AZU1P20160 251 aa2.39□□□□□ -2.03
XRN1-209ENST00000472625 CAMLGP49069 296 aa2.39□□□□□ -2.03
XRN1-209ENST00000472625 TCL1AP56279 114 aa2.39□□□□□ -2.03
XRN1-209ENST00000472625 ASAH1Q13510 395 aa2.39□□□□□ -2.03
XRN1-209ENST00000472625 PPP1R1AQ13522 171 aa2.39□□□□□ -2.03
XRN1-209ENST00000472625 LAGE3Q14657 143 aa2.39□□□□□ -2.03
XRN1-209ENST00000472625 ZNF846Q147U1 533 aa2.39□□□□□ -2.03
XRN1-209ENST00000472625 ESRGQ1W209 222 aa2.39□□□□□ -2.03
XRN1-209ENST00000472625 PYDC2Q56P42 97 aa2.39□□□□□ -2.03
XRN1-209ENST00000472625 SPANXN2Q5MJ10 180 aa2.39□□□□□ -2.03
XRN1-209ENST00000472625 TRIQKQ629K1 86 aa2.39□□□□□ -2.03
XRN1-209ENST00000472625 TMEM14EPQ6UXP3 125 aa2.39□□□□□ -2.03
XRN1-209ENST00000472625 LYPD1Q8N2G4 141 aa2.39□□□□□ -2.03
XRN1-209ENST00000472625 LINC00477Q96M19 166 aa2.39□□□□□ -2.03
XRN1-209ENST00000472625 UHRF2Q96PU4 802 aa2.39□□□□□ -2.03
XRN1-209ENST00000472625 SRRQ9GZT4 340 aa2.39□□□□□ -2.03
XRN1-209ENST00000472625 C20orf85Q9H1P6 137 aa2.39□□□□□ -2.03
XRN1-209ENST00000472625 FUT9Q9Y231 359 aa2.39□□□□□ -2.03
XRN1-209ENST00000472625 IGHV1OR15-1A0A075B7D0 117 aa2.38□□□□□ -2.03
XRN1-209ENST00000472625 A0A087WTM6 91 aa2.38□□□□□ -2.03
XRN1-209ENST00000472625 A0A096LPF7 62 aa2.38□□□□□ -2.03
XRN1-209ENST00000472625 TRAV8-6A0A0B4J262 113 aa2.38□□□□□ -2.03
XRN1-209ENST00000472625 TRAV12-3A0A0B4J271 114 aa2.38□□□□□ -2.03
XRN1-209ENST00000472625 TRGV4A0A0C4DH28 118 aa2.38□□□□□ -2.03
XRN1-209ENST00000472625 CTDSP2O14595 271 aa2.38□□□□□ -2.03
XRN1-209ENST00000472625 AGPAT2O15120 278 aa2.38□□□□□ -2.03
XRN1-209ENST00000472625 MRPS12O15235 138 aaKnown RBP2.38□□□□□ -2.03
XRN1-209ENST00000472625 SPINK4O60575 86 aa2.38□□□□□ -2.03
XRN1-209ENST00000472625 GPX1P07203 203 aa2.38□□□□□ -2.03
XRN1-209ENST00000472625 CRYGDP07320 174 aa2.38□□□□□ -2.03
XRN1-209ENST00000472625 METTL15P1P0C7V9 234 aa2.38□□□□□ -2.03
XRN1-209ENST00000472625 DNAH10OSP0CZ25 163 aa2.38□□□□□ -2.03
XRN1-209ENST00000472625 CRISP2P16562 243 aa2.38□□□□□ -2.03
XRN1-209ENST00000472625 GATA2P23769 480 aaPredicted RBP2.38□□□□□ -2.03
XRN1-209ENST00000472625 CSN1S1P47710 185 aa2.38□□□□□ -2.03
XRN1-209ENST00000472625 PPT1P50897 306 aa2.38□□□□□ -2.03
XRN1-209ENST00000472625 RRAS2P62070 204 aaPredicted RBP2.38□□□□□ -2.03
XRN1-209ENST00000472625 SLC38A11Q08AI6 406 aa2.38□□□□□ -2.03
XRN1-209ENST00000472625 FCN2Q15485 313 aa2.38□□□□□ -2.03
XRN1-209ENST00000472625 IAH1Q2TAA2 248 aaPredicted RBP2.38□□□□□ -2.03
XRN1-209ENST00000472625 WDR73Q6P4I2 378 aa2.38□□□□□ -2.03
XRN1-209ENST00000472625 Q6ZRN7 208 aaPredicted RBP2.38□□□□□ -2.03
XRN1-209ENST00000472625 Q6ZTI0 123 aa2.38□□□□□ -2.03
XRN1-209ENST00000472625 ZNF431Q8TF32 576 aaPredicted RBP2.38□□□□□ -2.03
XRN1-209ENST00000472625 TRIM63Q969Q1 353 aa2.38□□□□□ -2.03
XRN1-209ENST00000472625 C17orf77Q96MU5 243 aa2.38□□□□□ -2.03
XRN1-209ENST00000472625 SPXQ9BT56 116 aa2.38□□□□□ -2.03
XRN1-209ENST00000472625 MIXL1Q9H2W2 232 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms