RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 ABCA13Q86UQ4 5058 aa15.55■□□□□ 0.08
C9orf3-213ENST00000471978 TRBV7-9A0A0J9YWB2 115 aa15.54■□□□□ 0.08
C9orf3-213ENST00000471978 MPC2O95563 127 aa15.54■□□□□ 0.08
C9orf3-213ENST00000471978 IGHV3-53P01767 116 aa15.54■□□□□ 0.08
C9orf3-213ENST00000471978 PET100P0DJ07 73 aa15.54■□□□□ 0.08
C9orf3-213ENST00000471978 UBE2L3P68036 154 aaKnown RBP15.54■□□□□ 0.08
C9orf3-213ENST00000471978 LYPD1Q8N2G4 141 aa15.54■□□□□ 0.08
C9orf3-213ENST00000471978 MRPL16Q9NX20 251 aaKnown RBP15.54■□□□□ 0.08
C9orf3-213ENST00000471978 RBAKDNA6NC62 111 aa15.53■□□□□ 0.08
C9orf3-213ENST00000471978 A6NHS1 94 aa15.53■□□□□ 0.08
C9orf3-213ENST00000471978 SCGB1C1Q8TD33 95 aa15.53■□□□□ 0.08
C9orf3-213ENST00000471978 SMIM3Q9BZL3 60 aa15.53■□□□□ 0.08
C9orf3-213ENST00000471978 PTTG2Q9NZH5 202 aa15.53■□□□□ 0.08
C9orf3-213ENST00000471978 PAX4O43316 350 aa15.52■□□□□ 0.08
C9orf3-213ENST00000471978 IFNA5P01569 189 aa15.52■□□□□ 0.08
C9orf3-213ENST00000471978 KHDC3LQ587J8 217 aa15.52■□□□□ 0.08
C9orf3-213ENST00000471978 RPL12P30050 165 aaKnown RBP15.51■□□□□ 0.07
C9orf3-213ENST00000471978 TAS2R45P59539 299 aa15.51■□□□□ 0.07
C9orf3-213ENST00000471978 DEFA1P59665 94 aa15.51■□□□□ 0.07
C9orf3-213ENST00000471978 DEFA3P59666 94 aa15.51■□□□□ 0.07
C9orf3-213ENST00000471978 ZNF415Q09FC8 603 aa15.51■□□□□ 0.07
C9orf3-213ENST00000471978 ZNF266Q14584 549 aa15.51■□□□□ 0.07
C9orf3-213ENST00000471978 ICOSQ9Y6W8 199 aa15.51■□□□□ 0.07
C9orf3-213ENST00000471978 MUC21Q5SSG8 566 aa15.5■□□□□ 0.07
C9orf3-213ENST00000471978 SPATA12Q7Z6I5 190 aa15.5■□□□□ 0.07
C9orf3-213ENST00000471978 PRO0255Q9UI72 69 aa15.5■□□□□ 0.07
C9orf3-213ENST00000471978 DIRC3C9JPN6 131 aa15.49■□□□□ 0.07
C9orf3-213ENST00000471978 CDK2AP2O75956 126 aa15.49■□□□□ 0.07
C9orf3-213ENST00000471978 BTF3P20290 206 aaKnown RBP15.49■□□□□ 0.07
C9orf3-213ENST00000471978 MBD2Q9UBB5 411 aa15.49■□□□□ 0.07
C9orf3-213ENST00000471978 SIVA1O15304 175 aa15.48■□□□□ 0.07
C9orf3-213ENST00000471978 EIF3GO75821 320 aaKnown RBP eCLIP15.48■□□□□ 0.07
C9orf3-213ENST00000471978 SLAQ13239 276 aa15.48■□□□□ 0.07
C9orf3-213ENST00000471978 HYLS1Q96M11 299 aa15.48■□□□□ 0.07
C9orf3-213ENST00000471978 C8orf49Q96NF6 230 aa15.48■□□□□ 0.07
C9orf3-213ENST00000471978 KRTAP4-5Q9BYR2 181 aa15.48■□□□□ 0.07
C9orf3-213ENST00000471978 MDFICQ9P1T7 246 aa15.48■□□□□ 0.07
C9orf3-213ENST00000471978 HHLA3Q9XRX5 114 aa15.48■□□□□ 0.07
C9orf3-213ENST00000471978 CRYBA4P53673 196 aa15.47■□□□□ 0.07
C9orf3-213ENST00000471978 FHL2Q14192 279 aa15.47■□□□□ 0.07
C9orf3-213ENST00000471978 Q6AWC8 147 aa15.47■□□□□ 0.07
C9orf3-213ENST00000471978 LENEPQ9Y5L5 61 aa15.47■□□□□ 0.07
C9orf3-213ENST00000471978 DNAH5Q8TE73 4624 aa15.46■□□□□ 0.07
C9orf3-213ENST00000471978 NXPH4O95158 308 aa15.46■□□□□ 0.07
C9orf3-213ENST00000471978 LINC00315P59091 139 aa15.46■□□□□ 0.07
C9orf3-213ENST00000471978 FAM159AQ6UWV7 190 aa15.46■□□□□ 0.07
C9orf3-213ENST00000471978 WFDC1Q9HC57 220 aa15.46■□□□□ 0.07
C9orf3-213ENST00000471978 OTORQ9NRC9 128 aa15.46■□□□□ 0.07
C9orf3-213ENST00000471978 APOBP04114 4563 aaKnown RBP15.46■□□□□ 0.07
C9orf3-213ENST00000471978 TMEM183BQ1AE95 376 aa15.45■□□□□ 0.06
C9orf3-213ENST00000471978 TMEM183AQ8IXX5 376 aa15.45■□□□□ 0.06
C9orf3-213ENST00000471978 CMTM2Q8TAZ6 248 aa15.45■□□□□ 0.06
C9orf3-213ENST00000471978 TMED6Q8WW62 240 aa15.45■□□□□ 0.06
C9orf3-213ENST00000471978 RPH3ALQ9UNE2 315 aa15.45■□□□□ 0.06
C9orf3-213ENST00000471978 TRGV11A0A075B6L2 103 aa15.44■□□□□ 0.06
C9orf3-213ENST00000471978 TRGV4A0A0C4DH28 118 aa15.44■□□□□ 0.06
C9orf3-213ENST00000471978 PGPA6NDG6 321 aa15.44■□□□□ 0.06
C9orf3-213ENST00000471978 MRPL23Q16540 153 aaKnown RBP15.44■□□□□ 0.06
C9orf3-213ENST00000471978 ACOT6Q3I5F7 207 aaPredicted RBP15.44■□□□□ 0.06
C9orf3-213ENST00000471978 FAM74A1Q5RGS3 127 aa15.44■□□□□ 0.06
C9orf3-213ENST00000471978 SPXQ9BT56 116 aa15.44■□□□□ 0.06
C9orf3-213ENST00000471978 A0A1W2PPV4 95 aa15.43■□□□□ 0.06
C9orf3-213ENST00000471978 KRTAP10-2P60368 255 aa15.43■□□□□ 0.06
C9orf3-213ENST00000471978 LYPD5Q6UWN5 251 aa15.43■□□□□ 0.06
C9orf3-213ENST00000471978 PQLC2Q6ZP29 291 aa15.43■□□□□ 0.06
C9orf3-213ENST00000471978 NAGKQ9UJ70 344 aa15.43■□□□□ 0.06
C9orf3-213ENST00000471978 SFTA3P0C7M3 94 aa15.42■□□□□ 0.06
C9orf3-213ENST00000471978 RAB2AP61019 212 aa15.42■□□□□ 0.06
C9orf3-213ENST00000471978 MAPKAPK5-AS1Q8N8E1 139 aa15.42■□□□□ 0.06
C9orf3-213ENST00000471978 RASL10AQ92737 203 aa15.42■□□□□ 0.06
C9orf3-213ENST00000471978 ZNF479Q96JC4 524 aa15.42■□□□□ 0.06
C9orf3-213ENST00000471978 GOLT1AQ6ZVE7 132 aa15.41■□□□□ 0.06
C9orf3-213ENST00000471978 NEGR1Q7Z3B1 354 aa15.41■□□□□ 0.06
C9orf3-213ENST00000471978 IQCF2Q8IXL9 164 aa15.41■□□□□ 0.06
C9orf3-213ENST00000471978 OR10G4Q8NGN3 311 aa15.41■□□□□ 0.06
C9orf3-213ENST00000471978 TDRG1Q3Y452 100 aa15.4■□□□□ 0.06
C9orf3-213ENST00000471978 Q6ZRN7 208 aaPredicted RBP15.4■□□□□ 0.06
C9orf3-213ENST00000471978 K7EQD1 137 aa15.39■□□□□ 0.05
C9orf3-213ENST00000471978 HMGB3O15347 200 aaKnown RBP15.39■□□□□ 0.05
C9orf3-213ENST00000471978 SRIP30626 198 aa15.39■□□□□ 0.05
C9orf3-213ENST00000471978 ARL6IP6Q8N6S5 226 aa15.39■□□□□ 0.05
C9orf3-213ENST00000471978 OR10G9Q8NGN4 311 aa15.39■□□□□ 0.05
C9orf3-213ENST00000471978 OR10G7Q8NGN6 311 aa15.39■□□□□ 0.05
C9orf3-213ENST00000471978 PCNPQ8WW12 178 aaKnown RBP15.39■□□□□ 0.05
C9orf3-213ENST00000471978 TRAV8-1A0A0A6YYK1 113 aa15.38■□□□□ 0.05
C9orf3-213ENST00000471978 GNRH2O43555 120 aa15.38■□□□□ 0.05
C9orf3-213ENST00000471978 ALG5Q9Y673 324 aa15.38■□□□□ 0.05
C9orf3-213ENST00000471978 TRAV21A0A0B4J279 112 aa15.37■□□□□ 0.05
C9orf3-213ENST00000471978 F6UZH7 168 aa15.37■□□□□ 0.05
C9orf3-213ENST00000471978 GYPEP15421 78 aa15.37■□□□□ 0.05
C9orf3-213ENST00000471978 GNG5P63218 68 aa15.37■□□□□ 0.05
C9orf3-213ENST00000471978 TVP23CQ96ET8 276 aa15.37■□□□□ 0.05
C9orf3-213ENST00000471978 TREM1Q9NP99 234 aa15.37■□□□□ 0.05
C9orf3-213ENST00000471978 TRAV4A0A0B4J268 109 aa15.36■□□□□ 0.05
C9orf3-213ENST00000471978 IGHV3-16A0A0C4DH30 117 aa15.36■□□□□ 0.05
C9orf3-213ENST00000471978 M0R2P5 195 aa15.36■□□□□ 0.05
C9orf3-213ENST00000471978 ORM1P02763 201 aa15.36■□□□□ 0.05
C9orf3-213ENST00000471978 OR4C5Q8NGB2 326 aa15.36■□□□□ 0.05
C9orf3-213ENST00000471978 TNFRSF18Q9Y5U5 241 aa15.36■□□□□ 0.05
C9orf3-213ENST00000471978 TRAV9-2A0A087WT02 112 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 167 ms