RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 KAAG1Q9UBP8 84 aa6.76□□□□□ -1.33
CD47-204ENST00000471694 TRBV6-6A0A0A6YYG2 114 aa6.76□□□□□ -1.33
CD47-204ENST00000471694 TMEM170AQ8WVE7 144 aa6.76□□□□□ -1.33
CD47-204ENST00000471694 SRP19P09132 144 aaKnown RBP6.76□□□□□ -1.33
CD47-204ENST00000471694 C9orf47Q6ZRZ4 202 aa6.76□□□□□ -1.33
CD47-204ENST00000471694 Q86TA4 180 aa6.76□□□□□ -1.33
CD47-204ENST00000471694 B9D2Q9BPU9 175 aa6.76□□□□□ -1.33
CD47-204ENST00000471694 NDUFA4L2Q9NRX3 87 aa6.76□□□□□ -1.33
CD47-204ENST00000471694 DEFB131BA0A096LNP1 70 aa6.76□□□□□ -1.33
CD47-204ENST00000471694 IGKV2-24A0A0C4DH68 120 aa6.76□□□□□ -1.33
CD47-204ENST00000471694 NEGR1Q7Z3B1 354 aa6.76□□□□□ -1.33
CD47-204ENST00000471694 CTSZQ9UBR2 303 aa6.76□□□□□ -1.33
CD47-204ENST00000471694 DSCR8Q96T75 97 aa6.75□□□□□ -1.33
CD47-204ENST00000471694 ALPK2Q86TB3 2170 aa6.75□□□□□ -1.33
CD47-204ENST00000471694 ZNF503-AS2A6NEH8 195 aa6.75□□□□□ -1.33
CD47-204ENST00000471694 PRB2P02812 416 aaPredicted RBP6.75□□□□□ -1.33
CD47-204ENST00000471694 INAFM2P0DMQ5 153 aa6.75□□□□□ -1.33
CD47-204ENST00000471694 FOXL2NBQ6ZUU3 175 aa6.75□□□□□ -1.33
CD47-204ENST00000471694 AMN1Q8IY45 258 aa6.75□□□□□ -1.33
CD47-204ENST00000471694 ZNF479Q96JC4 524 aa6.75□□□□□ -1.33
CD47-204ENST00000471694 A0A087WWC5 75 aa6.75□□□□□ -1.33
CD47-204ENST00000471694 C2orf70A6NJV1 201 aa6.75□□□□□ -1.33
CD47-204ENST00000471694 SERF1AO75920 110 aa6.75□□□□□ -1.33
CD47-204ENST00000471694 TMEM141Q96I45 108 aa6.75□□□□□ -1.33
CD47-204ENST00000471694 NPBQ8NG41 125 aa6.74□□□□□ -1.33
CD47-204ENST00000471694 OR11H6Q8NGC7 330 aa6.74□□□□□ -1.33
CD47-204ENST00000471694 CHAC1Q9BUX1 264 aa6.74□□□□□ -1.33
CD47-204ENST00000471694 ZNF581Q9P0T4 197 aa6.74□□□□□ -1.33
CD47-204ENST00000471694 TSC2P49815 1807 aa6.74□□□□□ -1.33
CD47-204ENST00000471694 TRAV26-2A0A0B4J265 109 aa6.74□□□□□ -1.33
CD47-204ENST00000471694 COX7A2LO14548 114 aa6.74□□□□□ -1.33
CD47-204ENST00000471694 SPINK8P0C7L1 97 aa6.74□□□□□ -1.33
CD47-204ENST00000471694 HERVK_113P63121 156 aa6.74□□□□□ -1.33
CD47-204ENST00000471694 SDHAF1A6NFY7 115 aa6.74□□□□□ -1.33
CD47-204ENST00000471694 H3BRN7 92 aa6.74□□□□□ -1.33
CD47-204ENST00000471694 LINC01559Q495D7 138 aa6.74□□□□□ -1.33
CD47-204ENST00000471694 C5orf56Q8N8D9 126 aa6.74□□□□□ -1.33
CD47-204ENST00000471694 ARFGEF3Q5TH69 2177 aa6.74□□□□□ -1.33
CD47-204ENST00000471694 ZNF493Q6ZR52 646 aa6.74□□□□□ -1.33
CD47-204ENST00000471694 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.74□□□□□ -1.33
CD47-204ENST00000471694 IGKV2-29A2NJV5 120 aaPredicted RBP6.74□□□□□ -1.33
CD47-204ENST00000471694 PARD6GQ9BYG4 376 aaPredicted RBP6.74□□□□□ -1.33
CD47-204ENST00000471694 GAGE2AQ6NT46 116 aa6.74□□□□□ -1.33
CD47-204ENST00000471694 ADAMTSL5Q6ZMM2 481 aa6.74□□□□□ -1.33
CD47-204ENST00000471694 C5orf38Q86SI9 138 aa6.74□□□□□ -1.33
CD47-204ENST00000471694 RBM38Q9H0Z9 239 aaKnown RBP6.74□□□□□ -1.33
CD47-204ENST00000471694 LY96Q9Y6Y9 160 aa6.74□□□□□ -1.33
CD47-204ENST00000471694 CRYGCP07315 174 aa6.73□□□□□ -1.33
CD47-204ENST00000471694 WDR86Q86TI4 376 aa6.73□□□□□ -1.33
CD47-204ENST00000471694 AGMATQ9BSE5 352 aa6.73□□□□□ -1.33
CD47-204ENST00000471694 DENND4AQ7Z401 1863 aa6.73□□□□□ -1.33
CD47-204ENST00000471694 POLEQ07864 2286 aa6.73□□□□□ -1.33
CD47-204ENST00000471694 UBE2D4Q9Y2X8 147 aa6.73□□□□□ -1.33
CD47-204ENST00000471694 RNF152Q8N8N0 203 aa6.73□□□□□ -1.33
CD47-204ENST00000471694 PROP1O75360 226 aa6.73□□□□□ -1.33
CD47-204ENST00000471694 CRYGDP07320 174 aa6.73□□□□□ -1.33
CD47-204ENST00000471694 CNOT1A5YKK6 2376 aaKnown RBP6.73□□□□□ -1.33
CD47-204ENST00000471694 CHKB-CPT1BH3BT56 60 aa6.73□□□□□ -1.33
CD47-204ENST00000471694 ODF3L1Q8IXM7 274 aa6.73□□□□□ -1.33
CD47-204ENST00000471694 Q8NA96 180 aa6.73□□□□□ -1.33
CD47-204ENST00000471694 GNB1LQ9BYB4 327 aa6.73□□□□□ -1.33
CD47-204ENST00000471694 KLK12Q9UKR0 248 aa6.73□□□□□ -1.33
CD47-204ENST00000471694 GNRH2O43555 120 aa6.72□□□□□ -1.33
CD47-204ENST00000471694 NDUFA12Q9UI09 145 aa6.72□□□□□ -1.33
CD47-204ENST00000471694 SPTBN2O15020 2390 aa6.72□□□□□ -1.33
CD47-204ENST00000471694 Q0VG73 95 aa6.72□□□□□ -1.33
CD47-204ENST00000471694 NUP35Q8NFH5 326 aa6.72□□□□□ -1.33
CD47-204ENST00000471694 ARID1AO14497 2285 aa6.72□□□□□ -1.33
CD47-204ENST00000471694 TRBV19A0A075B6N1 114 aa6.72□□□□□ -1.33
CD47-204ENST00000471694 C2orf82Q6UX34 121 aa6.72□□□□□ -1.33
CD47-204ENST00000471694 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.72□□□□□ -1.33
CD47-204ENST00000471694 NCOR1P1Q9H4R4 102 aa6.72□□□□□ -1.33
CD47-204ENST00000471694 NUP210Q8TEM1 1887 aaPredicted RBP6.72□□□□□ -1.33
CD47-204ENST00000471694 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.72□□□□□ -1.33
CD47-204ENST00000471694 CTAG1AP78358 180 aa6.72□□□□□ -1.33
CD47-204ENST00000471694 MBD3L1Q8WWY6 194 aa6.72□□□□□ -1.33
CD47-204ENST00000471694 AKAP6Q13023 2319 aa6.72□□□□□ -1.33
CD47-204ENST00000471694 FNDC10F2Z333 226 aa6.71□□□□□ -1.33
CD47-204ENST00000471694 NDUFA1O15239 70 aa6.71□□□□□ -1.33
CD47-204ENST00000471694 NDUFB1O75438 58 aa6.71□□□□□ -1.33
CD47-204ENST00000471694 WFDC1Q9HC57 220 aa6.71□□□□□ -1.33
CD47-204ENST00000471694 KIF26AQ9ULI4 1882 aaPredicted RBP6.71□□□□□ -1.33
CD47-204ENST00000471694 TMEM213A2RRL7 107 aa6.71□□□□□ -1.33
CD47-204ENST00000471694 CTSGP08311 255 aa6.71□□□□□ -1.33
CD47-204ENST00000471694 SPRNQ5BIV9 151 aa6.71□□□□□ -1.33
CD47-204ENST00000471694 SEM1Q6ZVN7 128 aa6.71□□□□□ -1.33
CD47-204ENST00000471694 LYPD6BQ8NI32 183 aa6.71□□□□□ -1.33
CD47-204ENST00000471694 ODF1Q14990 250 aa6.71□□□□□ -1.34
CD47-204ENST00000471694 PUSL1Q8N0Z8 303 aaKnown RBP6.71□□□□□ -1.34
CD47-204ENST00000471694 H3BUT2 72 aa6.71□□□□□ -1.34
CD47-204ENST00000471694 SMIM6P0DI80 62 aa6.71□□□□□ -1.34
CD47-204ENST00000471694 IGKV1-6A0A0C4DH72 117 aa6.71□□□□□ -1.34
CD47-204ENST00000471694 SOCS3O14543 225 aa6.71□□□□□ -1.34
CD47-204ENST00000471694 Q6YL49 198 aa6.71□□□□□ -1.34
CD47-204ENST00000471694 DOCK9Q9BZ29 2069 aa6.7□□□□□ -1.34
CD47-204ENST00000471694 NCKAP5O14513 1909 aa6.7□□□□□ -1.34
CD47-204ENST00000471694 A0A087WZ39 114 aa6.7□□□□□ -1.34
CD47-204ENST00000471694 IGHV4-28A0A0C4DH34 117 aa6.7□□□□□ -1.34
CD47-204ENST00000471694 KIF26BQ2KJY2 2108 aa6.7□□□□□ -1.34
CD47-204ENST00000471694 FSHBP01225 129 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms