RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 K7EN84 100 aa14.04□□□□□ -0.16
PSPC1-203ENST00000471658 GPX1P07203 203 aa14.04□□□□□ -0.16
PSPC1-203ENST00000471658 MGST1P10620 155 aaKnown RBP14.04□□□□□ -0.16
PSPC1-203ENST00000471658 CRIP1P50238 77 aa14.04□□□□□ -0.16
PSPC1-203ENST00000471658 OR5I1Q13606 314 aa14.04□□□□□ -0.16
PSPC1-203ENST00000471658 TMEM241Q24JQ0 296 aa14.04□□□□□ -0.16
PSPC1-203ENST00000471658 FAM74A3Q4VXF1 159 aa14.04□□□□□ -0.16
PSPC1-203ENST00000471658 KLLNB2CW77 178 aa14.04□□□□□ -0.16
PSPC1-203ENST00000471658 SMUG1Q53HV7 270 aa14.04□□□□□ -0.16
PSPC1-203ENST00000471658 GFI1BQ5VTD9 330 aa14.04□□□□□ -0.16
PSPC1-203ENST00000471658 CSTL1Q9H114 145 aa14.04□□□□□ -0.16
PSPC1-203ENST00000471658 TRBV7-9A0A0J9YWB2 115 aa14.03□□□□□ -0.16
PSPC1-203ENST00000471658 GCGP01275 180 aa14.03□□□□□ -0.16
PSPC1-203ENST00000471658 RBMY1A1P0DJD3 496 aaKnown RBP14.03□□□□□ -0.16
PSPC1-203ENST00000471658 RBMY1CP0DJD4 496 aa14.03□□□□□ -0.16
PSPC1-203ENST00000471658 TSPOP30536 169 aa14.03□□□□□ -0.16
PSPC1-203ENST00000471658 RBMY1FQ15415 496 aaKnown RBP14.03□□□□□ -0.16
PSPC1-203ENST00000471658 TRAV12-3A0A0B4J271 114 aa14.02□□□□□ -0.16
PSPC1-203ENST00000471658 A8MZ25 164 aa14.02□□□□□ -0.16
PSPC1-203ENST00000471658 CA1P00915 261 aaPredicted RBP14.02□□□□□ -0.16
PSPC1-203ENST00000471658 FRMD6-AS1P0C7T7 363 aa14.02□□□□□ -0.16
PSPC1-203ENST00000471658 NUTF2P61970 127 aaKnown RBP14.02□□□□□ -0.16
PSPC1-203ENST00000471658 RPL23P62829 140 aaKnown RBP14.02□□□□□ -0.16
PSPC1-203ENST00000471658 DEFB121Q5J5C9 76 aa14.02□□□□□ -0.16
PSPC1-203ENST00000471658 PRR27Q6MZM9 219 aa14.02□□□□□ -0.16
PSPC1-203ENST00000471658 MORN3Q6PF18 240 aaPredicted RBP14.02□□□□□ -0.16
PSPC1-203ENST00000471658 COX8CQ7Z4L0 72 aa14.02□□□□□ -0.16
PSPC1-203ENST00000471658 LINC01551Q86U37 167 aa14.02□□□□□ -0.16
PSPC1-203ENST00000471658 SDF2L1Q9HCN8 221 aa14.02□□□□□ -0.16
PSPC1-203ENST00000471658 NAT8Q9UHE5 227 aa14.02□□□□□ -0.16
PSPC1-203ENST00000471658 NIPSNAP3BQ9BS92 247 aa14.01□□□□□ -0.17
PSPC1-203ENST00000471658 SEC11CQ9BY50 192 aa14.01□□□□□ -0.17
PSPC1-203ENST00000471658 C7orf71A4D174 169 aa14.01□□□□□ -0.17
PSPC1-203ENST00000471658 C10orf91Q5T1B1 145 aa14.01□□□□□ -0.17
PSPC1-203ENST00000471658 ZNF324O75467 553 aaPredicted RBP14□□□□□ -0.17
PSPC1-203ENST00000471658 ADIRFQ15847 76 aa14□□□□□ -0.17
PSPC1-203ENST00000471658 LY96Q9Y6Y9 160 aa14□□□□□ -0.17
PSPC1-203ENST00000471658 SH2D1AO60880 128 aa13.99□□□□□ -0.17
PSPC1-203ENST00000471658 C1orf158Q8N1D5 194 aa13.99□□□□□ -0.17
PSPC1-203ENST00000471658 CSNK1G2-AS1Q8NCQ2 148 aa13.99□□□□□ -0.17
PSPC1-203ENST00000471658 SMIM12Q96EX1 92 aa13.99□□□□□ -0.17
PSPC1-203ENST00000471658 C11orf21Q9P2W6 132 aa13.99□□□□□ -0.17
PSPC1-203ENST00000471658 KIR2DL5BA0A0G2JN68 375 aa13.98□□□□□ -0.17
PSPC1-203ENST00000471658 KIR2DL5BA0A0G2JPC4 375 aa13.98□□□□□ -0.17
PSPC1-203ENST00000471658 AMBPP02760 352 aa13.98□□□□□ -0.17
PSPC1-203ENST00000471658 APOC4P55056 127 aa13.98□□□□□ -0.17
PSPC1-203ENST00000471658 Q6AWC8 147 aa13.98□□□□□ -0.17
PSPC1-203ENST00000471658 KIR2DL5AQ8N109 375 aa13.98□□□□□ -0.17
PSPC1-203ENST00000471658 KIR2DL5BQ8NHK3 375 aa13.98□□□□□ -0.17
PSPC1-203ENST00000471658 PRM2P04554 102 aa13.97□□□□□ -0.17
PSPC1-203ENST00000471658 PFN1P07737 140 aaKnown RBP13.97□□□□□ -0.17
PSPC1-203ENST00000471658 RNASE7Q9H1E1 156 aaKnown RBP13.97□□□□□ -0.17
PSPC1-203ENST00000471658 CARHSP1Q9Y2V2 147 aaKnown RBP13.97□□□□□ -0.17
PSPC1-203ENST00000471658 FABP5P3A8MUU1 101 aa13.97□□□□□ -0.17
PSPC1-203ENST00000471658 INSP01308 110 aa13.97□□□□□ -0.17
PSPC1-203ENST00000471658 MUC21Q5SSG8 566 aa13.97□□□□□ -0.17
PSPC1-203ENST00000471658 FAM162BQ5T6X4 162 aa13.97□□□□□ -0.17
PSPC1-203ENST00000471658 ISOC2Q96AB3 205 aa13.97□□□□□ -0.17
PSPC1-203ENST00000471658 IGHV3OR16-12A0A075B7B8 117 aa13.96□□□□□ -0.17
PSPC1-203ENST00000471658 TRAV21A0A0B4J279 112 aa13.96□□□□□ -0.17
PSPC1-203ENST00000471658 C19orf71A6NCJ1 209 aa13.96□□□□□ -0.17
PSPC1-203ENST00000471658 KRBOX1C9JBD0 128 aa13.96□□□□□ -0.17
PSPC1-203ENST00000471658 DEFA6Q01524 100 aa13.96□□□□□ -0.17
PSPC1-203ENST00000471658 NUDT10Q8NFP7 164 aa13.96□□□□□ -0.17
PSPC1-203ENST00000471658 MRAPQ8TCY5 172 aa13.96□□□□□ -0.17
PSPC1-203ENST00000471658 NUDT11Q96G61 164 aa13.96□□□□□ -0.17
PSPC1-203ENST00000471658 C1QTNF4Q9BXJ3 329 aa13.96□□□□□ -0.17
PSPC1-203ENST00000471658 APOC3P02656 99 aa13.95□□□□□ -0.18
PSPC1-203ENST00000471658 DEFB135Q30KP9 77 aa13.95□□□□□ -0.18
PSPC1-203ENST00000471658 NAGKQ9UJ70 344 aa13.95□□□□□ -0.18
PSPC1-203ENST00000471658 M0R036 132 aa13.94□□□□□ -0.18
PSPC1-203ENST00000471658 RPL19P84098 196 aaKnown RBP13.94□□□□□ -0.18
PSPC1-203ENST00000471658 SBSPONQ8IVN8 264 aa13.94□□□□□ -0.18
PSPC1-203ENST00000471658 HTN1P15515 57 aa13.93□□□□□ -0.18
PSPC1-203ENST00000471658 ANXA2RQ3ZCQ2 193 aa13.93□□□□□ -0.18
PSPC1-203ENST00000471658 ZNF575Q86XF7 245 aa13.93□□□□□ -0.18
PSPC1-203ENST00000471658 DAZAP1Q96EP5 407 aaKnown RBP13.93□□□□□ -0.18
PSPC1-203ENST00000471658 LINC01587Q99440 93 aa13.93□□□□□ -0.18
PSPC1-203ENST00000471658 BIN3Q9NQY0 253 aa13.93□□□□□ -0.18
PSPC1-203ENST00000471658 TMSB15BA0A087X1C1 80 aa13.93□□□□□ -0.18
PSPC1-203ENST00000471658 IGKV3D-20A0A0C4DH25 116 aa13.93□□□□□ -0.18
PSPC1-203ENST00000471658 UBE2CO00762 179 aa13.93□□□□□ -0.18
PSPC1-203ENST00000471658 ORM1P02763 201 aa13.93□□□□□ -0.18
PSPC1-203ENST00000471658 ERVFC1-1P60608 527 aa13.93□□□□□ -0.18
PSPC1-203ENST00000471658 TMEM208Q9BTX3 173 aa13.93□□□□□ -0.18
PSPC1-203ENST00000471658 TP53TG3Q9ULZ0 132 aa13.93□□□□□ -0.18
PSPC1-203ENST00000471658 PNRC1Q12796 327 aaPredicted RBP13.92□□□□□ -0.18
PSPC1-203ENST00000471658 IBA57Q5T440 356 aaKnown RBP13.92□□□□□ -0.18
PSPC1-203ENST00000471658 RETNQ9HD89 108 aa13.92□□□□□ -0.18
PSPC1-203ENST00000471658 NBEAL2Q6ZNJ1 2754 aa13.92□□□□□ -0.18
PSPC1-203ENST00000471658 ZNF705GA8MUZ8 300 aaPredicted RBP13.91□□□□□ -0.18
PSPC1-203ENST00000471658 GNRH2O43555 120 aa13.91□□□□□ -0.18
PSPC1-203ENST00000471658 SFRP2Q96HF1 295 aa13.91□□□□□ -0.18
PSPC1-203ENST00000471658 C20orf144Q9BQM9 153 aa13.91□□□□□ -0.18
PSPC1-203ENST00000471658 GOLT1BQ9Y3E0 138 aa13.91□□□□□ -0.18
PSPC1-203ENST00000471658 IGHV1OR15-1A0A075B7D0 117 aa13.9□□□□□ -0.18
PSPC1-203ENST00000471658 GRIFINA4D1Z8 144 aa13.9□□□□□ -0.18
PSPC1-203ENST00000471658 H7BYZ3 331 aa13.9□□□□□ -0.18
PSPC1-203ENST00000471658 ATP6V1G1O75348 118 aa13.9□□□□□ -0.18
PSPC1-203ENST00000471658 P01737 135 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms