RNA–Protein interactions for RNA: ENST00000471582.5

COL20A1-205, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 1,924 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-205ENST00000471582 EREGO14944 169 aa14.21□□□□□ -0.14
COL20A1-205ENST00000471582 ZNF705AQ6ZN79 300 aaPredicted RBP14.21□□□□□ -0.14
COL20A1-205ENST00000471582 ORMDL3Q8N138 153 aa14.21□□□□□ -0.14
COL20A1-205ENST00000471582 KLHDC1Q8N7A1 406 aa14.21□□□□□ -0.14
COL20A1-205ENST00000471582 SNHG12Q9BXW3 62 aa14.21□□□□□ -0.14
COL20A1-205ENST00000471582 NPFFR1Q9GZQ6 430 aa14.21□□□□□ -0.14
COL20A1-205ENST00000471582 CELSR1Q9NYQ6 3014 aa14.2□□□□□ -0.14
COL20A1-205ENST00000471582 SMAD7O15105 426 aaKnown RBP14.2□□□□□ -0.14
COL20A1-205ENST00000471582 Q6ZS46 218 aa14.2□□□□□ -0.14
COL20A1-205ENST00000471582 AMN1Q8IY45 258 aa14.2□□□□□ -0.14
COL20A1-205ENST00000471582 TMEM191AQ9H0A3 160 aa14.2□□□□□ -0.14
COL20A1-205ENST00000471582 D6R8Y8 96 aa14.19□□□□□ -0.14
COL20A1-205ENST00000471582 IGHV3-11P01762 117 aa14.19□□□□□ -0.14
COL20A1-205ENST00000471582 IGHV4-31P0DP07 118 aa14.19□□□□□ -0.14
COL20A1-205ENST00000471582 TWIST1Q15672 202 aa14.19□□□□□ -0.14
COL20A1-205ENST00000471582 HSPB8Q9UJY1 196 aa14.19□□□□□ -0.14
COL20A1-205ENST00000471582 HECTD1Q9ULT8 2610 aa14.19□□□□□ -0.14
COL20A1-205ENST00000471582 TRAV9-2A0A087WT02 112 aa14.19□□□□□ -0.14
COL20A1-205ENST00000471582 SYS1-DBNDD2H3BUS1 97 aa14.19□□□□□ -0.14
COL20A1-205ENST00000471582 SOCS3O14543 225 aa14.19□□□□□ -0.14
COL20A1-205ENST00000471582 CSN3P07498 182 aa14.19□□□□□ -0.14
COL20A1-205ENST00000471582 MRPL51Q4U2R6 128 aaKnown RBP14.19□□□□□ -0.14
COL20A1-205ENST00000471582 FA2HQ7L5A8 372 aa14.19□□□□□ -0.14
COL20A1-205ENST00000471582 PRSS3P2Q8NHM4 247 aa14.19□□□□□ -0.14
COL20A1-205ENST00000471582 PRELID3AQ96N28 172 aa14.19□□□□□ -0.14
COL20A1-205ENST00000471582 UQCR10Q9UDW1 63 aa14.19□□□□□ -0.14
COL20A1-205ENST00000471582 CR1P17927 2039 aa14.18□□□□□ -0.14
COL20A1-205ENST00000471582 IGLC3P0DOY3 106 aa14.18□□□□□ -0.14
COL20A1-205ENST00000471582 DEFB112Q30KQ8 113 aa14.18□□□□□ -0.14
COL20A1-205ENST00000471582 GPHB5Q86YW7 130 aa14.18□□□□□ -0.14
COL20A1-205ENST00000471582 Q96MF0 132 aa14.18□□□□□ -0.14
COL20A1-205ENST00000471582 UNC79Q9P2D8 2635 aa14.18□□□□□ -0.14
COL20A1-205ENST00000471582 KRTAP1-3Q8IUG1 177 aa14.17□□□□□ -0.14
COL20A1-205ENST00000471582 A0A1B0GV90 55 aa14.17□□□□□ -0.14
COL20A1-205ENST00000471582 TMEM89A2RUT3 159 aa14.17□□□□□ -0.14
COL20A1-205ENST00000471582 MAP1LC3CQ9BXW4 147 aa14.17□□□□□ -0.14
COL20A1-205ENST00000471582 IGKV3D-20A0A0C4DH25 116 aa14.16□□□□□ -0.14
COL20A1-205ENST00000471582 OVOL1O14753 267 aa14.16□□□□□ -0.14
COL20A1-205ENST00000471582 IGHV4-59P01825 116 aa14.16□□□□□ -0.14
COL20A1-205ENST00000471582 PET117Q6UWS5 81 aa14.16□□□□□ -0.14
COL20A1-205ENST00000471582 SPATA12Q7Z6I5 190 aa14.16□□□□□ -0.14
COL20A1-205ENST00000471582 ZNF738Q8NE65 137 aa14.16□□□□□ -0.14
COL20A1-205ENST00000471582 OR10AG1Q8NH19 301 aa14.16□□□□□ -0.14
COL20A1-205ENST00000471582 C20orf173Q96LM9 149 aa14.16□□□□□ -0.14
COL20A1-205ENST00000471582 LINC00477Q96M19 166 aa14.16□□□□□ -0.14
COL20A1-205ENST00000471582 DAZ1Q9NQZ3 744 aaKnown RBP14.16□□□□□ -0.14
COL20A1-205ENST00000471582 ZFHX3Q15911 3703 aa14.16□□□□□ -0.14
COL20A1-205ENST00000471582 MUC21A0A0G2JKD1 596 aa14.15□□□□□ -0.14
COL20A1-205ENST00000471582 IGHV7-4-1A0A0J9YVY3 117 aa14.15□□□□□ -0.14
COL20A1-205ENST00000471582 MUC21A0A140T8X8 626 aa14.15□□□□□ -0.14
COL20A1-205ENST00000471582 PPBPP02775 128 aa14.15□□□□□ -0.14
COL20A1-205ENST00000471582 MUC21Q5SSG8 566 aa14.15□□□□□ -0.14
COL20A1-205ENST00000471582 LINC00173Q6ZV60 143 aa14.15□□□□□ -0.14
COL20A1-205ENST00000471582 ATOH7Q8N100 152 aa14.15□□□□□ -0.14
COL20A1-205ENST00000471582 SIGLEC8Q9NYZ4 499 aa14.15□□□□□ -0.14
COL20A1-205ENST00000471582 C11orf21Q9P2W6 132 aa14.15□□□□□ -0.14
COL20A1-205ENST00000471582 ITPR2Q14571 2701 aa14.15□□□□□ -0.14
COL20A1-205ENST00000471582 K7EMT4 169 aa14.15□□□□□ -0.14
COL20A1-205ENST00000471582 PSMB8P28062 276 aa14.15□□□□□ -0.14
COL20A1-205ENST00000471582 SSTP61278 116 aa14.15□□□□□ -0.14
COL20A1-205ENST00000471582 PEF1Q9UBV8 284 aaKnown RBP14.15□□□□□ -0.14
COL20A1-205ENST00000471582 OR4C46A6NHA9 309 aa14.14□□□□□ -0.15
COL20A1-205ENST00000471582 FSHBP01225 129 aa14.14□□□□□ -0.15
COL20A1-205ENST00000471582 CKS2P33552 79 aa14.14□□□□□ -0.15
COL20A1-205ENST00000471582 IFI27P40305 119 aaPredicted RBP14.14□□□□□ -0.15
COL20A1-205ENST00000471582 LINC00469Q8N7U9 141 aa14.14□□□□□ -0.15
COL20A1-205ENST00000471582 OR10J6PQ8NGY7 276 aa14.14□□□□□ -0.15
COL20A1-205ENST00000471582 LAMTOR2Q9Y2Q5 125 aa14.14□□□□□ -0.15
COL20A1-205ENST00000471582 LCNL1Q6ZST4 164 aa14.13□□□□□ -0.15
COL20A1-205ENST00000471582 RNF185Q96GF1 192 aa14.13□□□□□ -0.15
COL20A1-205ENST00000471582 RHPN1-AS1Q9BWJ2 59 aa14.13□□□□□ -0.15
COL20A1-205ENST00000471582 MSRB1Q9NZV6 116 aa14.13□□□□□ -0.15
COL20A1-205ENST00000471582 CREBBPQ92793 2442 aa14.12□□□□□ -0.15
COL20A1-205ENST00000471582 MAJINQ3KP22 176 aa14.12□□□□□ -0.15
COL20A1-205ENST00000471582 FAM106AQ4KMX7 169 aa14.12□□□□□ -0.15
COL20A1-205ENST00000471582 SAMD13Q5VXD3 122 aa14.12□□□□□ -0.15
COL20A1-205ENST00000471582 ZNF747Q9BV97 191 aa14.12□□□□□ -0.15
COL20A1-205ENST00000471582 SMPXQ9UHP9 88 aa14.12□□□□□ -0.15
COL20A1-205ENST00000471582 PRRC2AP48634 2157 aaKnown RBP14.12□□□□□ -0.15
COL20A1-205ENST00000471582 CSPG4Q6UVK1 2322 aa14.11□□□□□ -0.15
COL20A1-205ENST00000471582 TRBV7-9A0A0J9YWB2 115 aa14.11□□□□□ -0.15
COL20A1-205ENST00000471582 NUTF2P61970 127 aaKnown RBP14.11□□□□□ -0.15
COL20A1-205ENST00000471582 FOXE3Q13461 319 aa14.11□□□□□ -0.15
COL20A1-205ENST00000471582 IGHV4-4A0A075B6R2 117 aa14.11□□□□□ -0.15
COL20A1-205ENST00000471582 SNAI2O43623 268 aa14.11□□□□□ -0.15
COL20A1-205ENST00000471582 NPYP01303 97 aa14.11□□□□□ -0.15
COL20A1-205ENST00000471582 IGLL1P15814 213 aa14.11□□□□□ -0.15
COL20A1-205ENST00000471582 TMEM95Q3KNT9 176 aa14.11□□□□□ -0.15
COL20A1-205ENST00000471582 ST20Q9HBF5 79 aa14.11□□□□□ -0.15
COL20A1-205ENST00000471582 VPREB3Q9UKI3 123 aa14.11□□□□□ -0.15
COL20A1-205ENST00000471582 A0A096LNJ9 63 aa14.1□□□□□ -0.15
COL20A1-205ENST00000471582 TCF21O43680 179 aa14.1□□□□□ -0.15
COL20A1-205ENST00000471582 TM4SF20Q53R12 229 aa14.1□□□□□ -0.15
COL20A1-205ENST00000471582 LINC01545Q5VT33 79 aa14.1□□□□□ -0.15
COL20A1-205ENST00000471582 ZFAND2AQ8N6M9 145 aa14.1□□□□□ -0.15
COL20A1-205ENST00000471582 LOC389332A0A1B0GUA5 103 aa14.09□□□□□ -0.15
COL20A1-205ENST00000471582 CACNG7P62955 275 aa14.09□□□□□ -0.15
COL20A1-205ENST00000471582 PRR9Q5T870 116 aa14.09□□□□□ -0.15
COL20A1-205ENST00000471582 Q6ZN92 141 aa14.09□□□□□ -0.15
COL20A1-205ENST00000471582 FAM19A4Q96LR4 140 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms