RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 ARHGAP31Q2M1Z3 1444 aa2.42□□□□□ -2.02
SMC5-202ENST00000471372 LINC00322Q6ZN03 302 aaPredicted RBP2.42□□□□□ -2.02
SMC5-202ENST00000471372 C5orf17Q8NAS9 161 aa2.42□□□□□ -2.02
SMC5-202ENST00000471372 TMEM14CQ9P0S9 112 aa2.42□□□□□ -2.02
SMC5-202ENST00000471372 METTL1Q9UBP6 276 aaKnown RBP2.42□□□□□ -2.02
SMC5-202ENST00000471372 OVOS2A0A0J9YW53 1432 aa2.42□□□□□ -2.02
SMC5-202ENST00000471372 OVOS2Q6IE36 1432 aa2.42□□□□□ -2.02
SMC5-202ENST00000471372 PTPRFP10586 1907 aa2.41□□□□□ -2.02
SMC5-202ENST00000471372 NDUFA2O43678 99 aa2.41□□□□□ -2.02
SMC5-202ENST00000471372 PPYP01298 95 aa2.41□□□□□ -2.02
SMC5-202ENST00000471372 IGHV3-33P01772 117 aa2.41□□□□□ -2.02
SMC5-202ENST00000471372 LINC00694P0DN24 101 aa2.41□□□□□ -2.02
SMC5-202ENST00000471372 C10orf111Q8N326 155 aa2.41□□□□□ -2.02
SMC5-202ENST00000471372 PFDN5Q99471 154 aa2.41□□□□□ -2.02
SMC5-202ENST00000471372 IGHV1-24A0A0C4DH33 117 aa2.4□□□□□ -2.03
SMC5-202ENST00000471372 A6NN06 94 aa2.4□□□□□ -2.03
SMC5-202ENST00000471372 KDELR1P24390 212 aa2.4□□□□□ -2.03
SMC5-202ENST00000471372 LIMD2Q9BT23 127 aa2.4□□□□□ -2.03
SMC5-202ENST00000471372 UNC13CQ8NB66 2214 aa2.4□□□□□ -2.03
SMC5-202ENST00000471372 ALPK3Q96L96 1907 aa2.39□□□□□ -2.03
SMC5-202ENST00000471372 LYNX1P0DP58 116 aa2.39□□□□□ -2.03
SMC5-202ENST00000471372 MMGT1Q8N4V1 131 aa2.39□□□□□ -2.03
SMC5-202ENST00000471372 SMIM7Q9BQ49 75 aa2.39□□□□□ -2.03
SMC5-202ENST00000471372 MCM3APO60318 1980 aa2.39□□□□□ -2.03
SMC5-202ENST00000471372 CCDC171Q6TFL3 1326 aa2.39□□□□□ -2.03
SMC5-202ENST00000471372 TRIOBPQ9H2D6 2365 aa2.38□□□□□ -2.03
SMC5-202ENST00000471372 PNMA8CA0A1B0GUJ8 204 aa2.38□□□□□ -2.03
SMC5-202ENST00000471372 FAM236AA0A1B0GUQ0 79 aa2.38□□□□□ -2.03
SMC5-202ENST00000471372 FAM236BA0A1B0GV22 79 aa2.38□□□□□ -2.03
SMC5-202ENST00000471372 JMJD7-PLA2G4BH0Y9G9 81 aa2.38□□□□□ -2.03
SMC5-202ENST00000471372 TSPAN19P0C672 248 aa2.38□□□□□ -2.03
SMC5-202ENST00000471372 IL9P15248 144 aa2.38□□□□□ -2.03
SMC5-202ENST00000471372 DNAJB13P59910 316 aa2.38□□□□□ -2.03
SMC5-202ENST00000471372 ASB16-AS1Q495Z4 193 aa2.38□□□□□ -2.03
SMC5-202ENST00000471372 CLLU1Q5K131 121 aa2.38□□□□□ -2.03
SMC5-202ENST00000471372 IZUMO2Q6UXV1 221 aa2.38□□□□□ -2.03
SMC5-202ENST00000471372 WFDC10AQ9H1F0 79 aa2.38□□□□□ -2.03
SMC5-202ENST00000471372 SLC35B3Q9H1N7 401 aa2.38□□□□□ -2.03
SMC5-202ENST00000471372 TPT1P8Q9HAU6 139 aa2.38□□□□□ -2.03
SMC5-202ENST00000471372 BICRAQ9NZM4 1560 aa2.38□□□□□ -2.03
SMC5-202ENST00000471372 TNRC6AQ8NDV7 1962 aaKnown RBP2.38□□□□□ -2.03
SMC5-202ENST00000471372 SIP14410 1827 aa2.38□□□□□ -2.03
SMC5-202ENST00000471372 DISP2A7MBM2 1401 aa2.37□□□□□ -2.03
SMC5-202ENST00000471372 IFITM5A6NNB3 132 aa2.37□□□□□ -2.03
SMC5-202ENST00000471372 J3QR89 54 aa2.37□□□□□ -2.03
SMC5-202ENST00000471372 CDC42EP2O14613 210 aa2.37□□□□□ -2.03
SMC5-202ENST00000471372 Q6ZSA8 131 aa2.37□□□□□ -2.03
SMC5-202ENST00000471372 CTAGE3PQ8IX95 158 aa2.37□□□□□ -2.03
SMC5-202ENST00000471372 TSC22D3Q99576 134 aa2.37□□□□□ -2.03
SMC5-202ENST00000471372 LSM2Q9Y333 95 aaKnown RBP2.37□□□□□ -2.03
SMC5-202ENST00000471372 ERBINQ96RT1 1412 aa2.36□□□□□ -2.03
SMC5-202ENST00000471372 BBIP1A8MTZ0 92 aa2.36□□□□□ -2.03
SMC5-202ENST00000471372 K7ERU9 68 aa2.36□□□□□ -2.03
SMC5-202ENST00000471372 NCS1P62166 190 aa2.36□□□□□ -2.03
SMC5-202ENST00000471372 KRTAP5-7Q6L8G8 165 aa2.36□□□□□ -2.03
SMC5-202ENST00000471372 LINC00526Q96FQ7 95 aa2.36□□□□□ -2.03
SMC5-202ENST00000471372 LPAR5Q9H1C0 372 aa2.36□□□□□ -2.03
SMC5-202ENST00000471372 MED13Q9UHV7 2174 aa2.36□□□□□ -2.03
SMC5-202ENST00000471372 PRG4Q92954 1404 aaPredicted RBP2.35□□□□□ -2.03
SMC5-202ENST00000471372 MYH1P12882 1939 aa2.35□□□□□ -2.03
SMC5-202ENST00000471372 CCSMST1Q4G0I0 132 aa2.35□□□□□ -2.03
SMC5-202ENST00000471372 TCTEX1D1Q8N7M0 179 aa2.35□□□□□ -2.03
SMC5-202ENST00000471372 VPS25Q9BRG1 176 aa2.35□□□□□ -2.03
SMC5-202ENST00000471372 VIRMAQ69YN4 1812 aaKnown RBP2.35□□□□□ -2.03
SMC5-202ENST00000471372 MUC19Q7Z5P9 8384 aa2.34□□□□□ -2.03
SMC5-202ENST00000471372 TRAV23DV6A0A075B6W5 121 aa2.34□□□□□ -2.03
SMC5-202ENST00000471372 IGLV3-32A0A0A0MS00 114 aa2.34□□□□□ -2.03
SMC5-202ENST00000471372 M0R129 80 aa2.34□□□□□ -2.03
SMC5-202ENST00000471372 CDK5RAP2Q96SN8 1893 aa2.34□□□□□ -2.03
SMC5-202ENST00000471372 MUC4Q99102 2169 aa2.34□□□□□ -2.04
SMC5-202ENST00000471372 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.34□□□□□ -2.04
SMC5-202ENST00000471372 WDR97A6NE52 1622 aa2.33□□□□□ -2.04
SMC5-202ENST00000471372 A0A1W2PPB8 328 aa2.33□□□□□ -2.04
SMC5-202ENST00000471372 A0A1W2PRS3 328 aa2.33□□□□□ -2.04
SMC5-202ENST00000471372 KIR3DP1A8MWS1 328 aa2.33□□□□□ -2.04
SMC5-202ENST00000471372 IGLV3-1P01715 115 aa2.33□□□□□ -2.04
SMC5-202ENST00000471372 RPS25P62851 125 aaKnown RBP2.33□□□□□ -2.04
SMC5-202ENST00000471372 PAIP2BQ9ULR5 123 aaKnown RBP2.33□□□□□ -2.04
SMC5-202ENST00000471372 FANCMQ8IYD8 2048 aa2.33□□□□□ -2.04
SMC5-202ENST00000471372 CASP8AP2Q9UKL3 1982 aa2.32□□□□□ -2.04
SMC5-202ENST00000471372 A0A0J9YY99 117 aa2.32□□□□□ -2.04
SMC5-202ENST00000471372 SULT1C4O75897 302 aa2.32□□□□□ -2.04
SMC5-202ENST00000471372 RBP4P02753 201 aa2.32□□□□□ -2.04
SMC5-202ENST00000471372 PLGLB1Q02325 96 aa2.32□□□□□ -2.04
SMC5-202ENST00000471372 CSAG1Q6PB30 78 aa2.32□□□□□ -2.04
SMC5-202ENST00000471372 OR10AC1Q8NH08 325 aa2.32□□□□□ -2.04
SMC5-202ENST00000471372 ODF3Q96PU9 254 aa2.32□□□□□ -2.04
SMC5-202ENST00000471372 MRPL57Q9BQC6 102 aaKnown RBP2.32□□□□□ -2.04
SMC5-202ENST00000471372 ERG28Q9UKR5 140 aa2.32□□□□□ -2.04
SMC5-202ENST00000471372 CACNA1BQ00975 2339 aa2.31□□□□□ -2.04
SMC5-202ENST00000471372 NPFFO15130 113 aa2.31□□□□□ -2.04
SMC5-202ENST00000471372 LINC00299Q6ZSB3 139 aa2.31□□□□□ -2.04
SMC5-202ENST00000471372 C3orf62Q6ZUJ4 267 aa2.31□□□□□ -2.04
SMC5-202ENST00000471372 PLPP5Q8NEB5 264 aa2.31□□□□□ -2.04
SMC5-202ENST00000471372 KIAA1549LQ6ZVL6 1849 aa2.31□□□□□ -2.04
SMC5-202ENST00000471372 NCR2O95944 276 aa2.3□□□□□ -2.04
SMC5-202ENST00000471372 ADCYAP1P18509 176 aa2.3□□□□□ -2.04
SMC5-202ENST00000471372 CHD3Q12873 2000 aaKnown RBP2.29□□□□□ -2.04
SMC5-202ENST00000471372 COPZ1P61923 177 aa2.29□□□□□ -2.04
SMC5-202ENST00000471372 IDO2Q6ZQW0 420 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms