RNA–Protein interactions for RNA: ENST00000471297.1

SMNDC1-204, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 823 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-204ENST00000471297 K7EQG2 157 aa4.57□□□□□ -1.68
SMNDC1-204ENST00000471297 SPRY2O43597 315 aa4.57□□□□□ -1.68
SMNDC1-204ENST00000471297 IGKV2D-40P01614 121 aaPredicted RBP4.57□□□□□ -1.68
SMNDC1-204ENST00000471297 P01737 135 aa4.57□□□□□ -1.68
SMNDC1-204ENST00000471297 TYMSP04818 313 aa4.57□□□□□ -1.68
SMNDC1-204ENST00000471297 CSN3P07498 182 aa4.57□□□□□ -1.68
SMNDC1-204ENST00000471297 CXCL1P09341 107 aa4.57□□□□□ -1.68
SMNDC1-204ENST00000471297 RPS10P46783 165 aaKnown RBP4.57□□□□□ -1.68
SMNDC1-204ENST00000471297 SNRPD3P62318 126 aaKnown RBP4.57□□□□□ -1.68
SMNDC1-204ENST00000471297 DEFB136Q30KP8 78 aa4.57□□□□□ -1.68
SMNDC1-204ENST00000471297 SMUG1Q53HV7 270 aa4.57□□□□□ -1.68
SMNDC1-204ENST00000471297 TMEM78Q5T7P6 136 aa4.57□□□□□ -1.68
SMNDC1-204ENST00000471297 KRTAP5-3Q6L8H2 238 aa4.57□□□□□ -1.68
SMNDC1-204ENST00000471297 PRR27Q6MZM9 219 aa4.57□□□□□ -1.68
SMNDC1-204ENST00000471297 RNF182Q8N6D2 247 aa4.57□□□□□ -1.68
SMNDC1-204ENST00000471297 NHLRC2Q8NBF2 726 aa4.57□□□□□ -1.68
SMNDC1-204ENST00000471297 ZNF738Q8NE65 137 aa4.57□□□□□ -1.68
SMNDC1-204ENST00000471297 DYNLRB2Q8TF09 96 aa4.57□□□□□ -1.68
SMNDC1-204ENST00000471297 VGLL1Q99990 258 aa4.57□□□□□ -1.68
SMNDC1-204ENST00000471297 AGPAT4-IT1Q9H0P7 198 aa4.57□□□□□ -1.68
SMNDC1-204ENST00000471297 MS4A6AQ9H2W1 248 aa4.57□□□□□ -1.68
SMNDC1-204ENST00000471297 RPP21Q9H633 154 aaKnown RBP4.57□□□□□ -1.68
SMNDC1-204ENST00000471297 SRD5A3Q9H8P0 318 aa4.57□□□□□ -1.68
SMNDC1-204ENST00000471297 SIGLEC8Q9NYZ4 499 aa4.57□□□□□ -1.68
SMNDC1-204ENST00000471297 CRYBG3Q68DQ2 2970 aa4.56□□□□□ -1.68
SMNDC1-204ENST00000471297 ITPR3Q14573 2671 aa4.56□□□□□ -1.68
SMNDC1-204ENST00000471297 TRAV25A0A0B4J276 109 aa4.56□□□□□ -1.68
SMNDC1-204ENST00000471297 A0A1W2PPQ1 181 aa4.56□□□□□ -1.68
SMNDC1-204ENST00000471297 XKRY2A2RUG3 117 aa4.56□□□□□ -1.68
SMNDC1-204ENST00000471297 IZUMO1RA6ND01 250 aa4.56□□□□□ -1.68
SMNDC1-204ENST00000471297 FABP5P3A8MUU1 101 aa4.56□□□□□ -1.68
SMNDC1-204ENST00000471297 PRAC2D3DTV9 90 aa4.56□□□□□ -1.68
SMNDC1-204ENST00000471297 ZNF138P52744 262 aa4.56□□□□□ -1.68
SMNDC1-204ENST00000471297 CMC4P56277 68 aaPredicted RBP4.56□□□□□ -1.68
SMNDC1-204ENST00000471297 FAM3BP58499 235 aaPredicted RBP4.56□□□□□ -1.68
SMNDC1-204ENST00000471297 RPS20P60866 119 aaKnown RBP4.56□□□□□ -1.68
SMNDC1-204ENST00000471297 ERCC8Q13216 396 aa4.56□□□□□ -1.68
SMNDC1-204ENST00000471297 DEFB114Q30KQ6 69 aa4.56□□□□□ -1.68
SMNDC1-204ENST00000471297 FAM162BQ5T6X4 162 aa4.56□□□□□ -1.68
SMNDC1-204ENST00000471297 ADAMTSL5Q6ZMM2 481 aa4.56□□□□□ -1.68
SMNDC1-204ENST00000471297 LINC00322Q6ZN03 302 aaPredicted RBP4.56□□□□□ -1.68
SMNDC1-204ENST00000471297 RBPMS2Q6ZRY4 209 aaKnown RBP4.56□□□□□ -1.68
SMNDC1-204ENST00000471297 OR8A1Q8NGG7 326 aa4.56□□□□□ -1.68
SMNDC1-204ENST00000471297 DCANP1Q8TF63 244 aa4.56□□□□□ -1.68
SMNDC1-204ENST00000471297 TSKUQ8WUA8 353 aa4.56□□□□□ -1.68
SMNDC1-204ENST00000471297 ZC2HC1AQ96GY0 325 aa4.56□□□□□ -1.68
SMNDC1-204ENST00000471297 DUX3Q96PT4 197 aa4.56□□□□□ -1.68
SMNDC1-204ENST00000471297 ASCL2Q99929 193 aa4.56□□□□□ -1.68
SMNDC1-204ENST00000471297 GFRA4Q9GZZ7 299 aa4.56□□□□□ -1.68
SMNDC1-204ENST00000471297 SAV1Q9H4B6 383 aaPredicted RBP4.56□□□□□ -1.68
SMNDC1-204ENST00000471297 NAT8BQ9UHF3 227 aa4.56□□□□□ -1.68
SMNDC1-204ENST00000471297 TACC2O95359 2948 aa4.55□□□□□ -1.68
SMNDC1-204ENST00000471297 IGKV3-7A0A075B6H7 116 aa4.55□□□□□ -1.68
SMNDC1-204ENST00000471297 TMEM189A5PLL7 270 aa4.55□□□□□ -1.68
SMNDC1-204ENST00000471297 DUSP14O95147 198 aaKnown RBP4.55□□□□□ -1.68
SMNDC1-204ENST00000471297 EDN2P20800 178 aa4.55□□□□□ -1.68
SMNDC1-204ENST00000471297 FOXA3P55318 350 aaPredicted RBP4.55□□□□□ -1.68
SMNDC1-204ENST00000471297 RAB5BP61020 215 aa4.55□□□□□ -1.68
SMNDC1-204ENST00000471297 HIST1H1AQ02539 215 aaPredicted RBP4.55□□□□□ -1.68
SMNDC1-204ENST00000471297 NSUN5P1Q3KNT7 163 aa4.55□□□□□ -1.68
SMNDC1-204ENST00000471297 Q6AWC8 147 aa4.55□□□□□ -1.68
SMNDC1-204ENST00000471297 EBLN2Q6P2I7 272 aa4.55□□□□□ -1.68
SMNDC1-204ENST00000471297 WDR73Q6P4I2 378 aa4.55□□□□□ -1.68
SMNDC1-204ENST00000471297 RASL11AQ6T310 242 aa4.55□□□□□ -1.68
SMNDC1-204ENST00000471297 PRIMA1Q86XR5 153 aa4.55□□□□□ -1.68
SMNDC1-204ENST00000471297 OR2D3Q8NGH3 330 aa4.55□□□□□ -1.68
SMNDC1-204ENST00000471297 OR2K2Q8NGT1 345 aa4.55□□□□□ -1.68
SMNDC1-204ENST00000471297 KRTAP4-5Q9BYR2 181 aa4.55□□□□□ -1.68
SMNDC1-204ENST00000471297 CCDC168Q8NDH2 2452 aa4.55□□□□□ -1.68
SMNDC1-204ENST00000471297 GCN1Q92616 2671 aaKnown RBP4.54□□□□□ -1.68
SMNDC1-204ENST00000471297 SH2D1AO60880 128 aa4.54□□□□□ -1.68
SMNDC1-204ENST00000471297 CRISP2P16562 243 aa4.54□□□□□ -1.68
SMNDC1-204ENST00000471297 TFPI2P48307 235 aa4.54□□□□□ -1.68
SMNDC1-204ENST00000471297 CRIP1P50238 77 aa4.54□□□□□ -1.68
SMNDC1-204ENST00000471297 SUMO4Q6EEV6 95 aa4.54□□□□□ -1.68
SMNDC1-204ENST00000471297 ATP5L2Q7Z4Y8 100 aa4.54□□□□□ -1.68
SMNDC1-204ENST00000471297 Q8TAT8 98 aa4.54□□□□□ -1.68
SMNDC1-204ENST00000471297 FAM19A4Q96LR4 140 aa4.54□□□□□ -1.68
SMNDC1-204ENST00000471297 ODF3Q96PU9 254 aa4.54□□□□□ -1.68
SMNDC1-204ENST00000471297 SPAG8Q99932 426 aaPredicted RBP4.54□□□□□ -1.68
SMNDC1-204ENST00000471297 GNB1LQ9BYB4 327 aa4.54□□□□□ -1.68
SMNDC1-204ENST00000471297 TRAPPC1Q9Y5R8 145 aa4.54□□□□□ -1.68
SMNDC1-204ENST00000471297 FASNP49327 2511 aaKnown RBP4.54□□□□□ -1.68
SMNDC1-204ENST00000471297 CENPEQ02224 2701 aa4.54□□□□□ -1.68
SMNDC1-204ENST00000471297 HIVEP2P31629 2446 aa4.54□□□□□ -1.68
SMNDC1-204ENST00000471297 TEX15Q9BXT5 2789 aa4.53□□□□□ -1.68
SMNDC1-204ENST00000471297 TRAV21A0A0B4J279 112 aa4.53□□□□□ -1.68
SMNDC1-204ENST00000471297 A0A0J9YX75 114 aa4.53□□□□□ -1.68
SMNDC1-204ENST00000471297 A0A1B0GW15 77 aa4.53□□□□□ -1.68
SMNDC1-204ENST00000471297 OR4C46A6NHA9 309 aa4.53□□□□□ -1.68
SMNDC1-204ENST00000471297 HIGD1CA8MV81 97 aa4.53□□□□□ -1.68
SMNDC1-204ENST00000471297 MT-ND6P03923 174 aa4.53□□□□□ -1.68
SMNDC1-204ENST00000471297 TRGC2P03986 189 aa4.53□□□□□ -1.68
SMNDC1-204ENST00000471297 ZNF688P0C7X2 276 aa4.53□□□□□ -1.68
SMNDC1-204ENST00000471297 NHLRC4P0CG21 123 aaPredicted RBP4.53□□□□□ -1.68
SMNDC1-204ENST00000471297 PRB4P10163 310 aaPredicted RBP4.53□□□□□ -1.68
SMNDC1-204ENST00000471297 TSPOP30536 169 aa4.53□□□□□ -1.68
SMNDC1-204ENST00000471297 LEPP41159 167 aa4.53□□□□□ -1.68
SMNDC1-204ENST00000471297 ZNF80P51504 273 aaPredicted RBP4.53□□□□□ -1.68
SMNDC1-204ENST00000471297 KRTAP10-3P60369 221 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms