RNA–Protein interactions for RNA: ENST00000470068.2

CCDC144A-212, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-212ENST00000470068 TFPI2P48307 235 aa4.9□□□□□ -1.63
CCDC144A-212ENST00000470068 MST1LQ2TV78 715 aa4.9□□□□□ -1.63
CCDC144A-212ENST00000470068 CD300EQ496F6 205 aaPredicted RBP4.9□□□□□ -1.63
CCDC144A-212ENST00000470068 C14orf177Q52M58 125 aa4.9□□□□□ -1.63
CCDC144A-212ENST00000470068 BPESC1Q9GZL8 116 aa4.9□□□□□ -1.63
CCDC144A-212ENST00000470068 SPANXB1Q9NS25 103 aaPredicted RBP4.9□□□□□ -1.63
CCDC144A-212ENST00000470068 ARID1BQ8NFD5 2236 aaPredicted RBP4.9□□□□□ -1.63
CCDC144A-212ENST00000470068 C15orf65H3BRN8 121 aa4.9□□□□□ -1.63
CCDC144A-212ENST00000470068 NPYP01303 97 aa4.9□□□□□ -1.63
CCDC144A-212ENST00000470068 V9GYV3 84 aa4.9□□□□□ -1.63
CCDC144A-212ENST00000470068 CCDC88CQ9P219 2028 aa4.89□□□□□ -1.63
CCDC144A-212ENST00000470068 KIR2DL5BA0A0G2JN68 375 aa4.89□□□□□ -1.63
CCDC144A-212ENST00000470068 KIR2DL5BA0A0G2JPC4 375 aa4.89□□□□□ -1.63
CCDC144A-212ENST00000470068 F8WDY8 70 aa4.89□□□□□ -1.63
CCDC144A-212ENST00000470068 ATOX1O00244 68 aa4.89□□□□□ -1.63
CCDC144A-212ENST00000470068 IGHV3-7P01780 117 aa4.89□□□□□ -1.63
CCDC144A-212ENST00000470068 CELA3BP08861 270 aa4.89□□□□□ -1.63
CCDC144A-212ENST00000470068 ZC2HC1BQ5TFG8 222 aa4.89□□□□□ -1.63
CCDC144A-212ENST00000470068 C2orf66Q6UXQ4 117 aa4.89□□□□□ -1.63
CCDC144A-212ENST00000470068 KIR2DL5AQ8N109 375 aa4.89□□□□□ -1.63
CCDC144A-212ENST00000470068 LSM4Q9Y4Z0 139 aaKnown RBP4.89□□□□□ -1.63
CCDC144A-212ENST00000470068 H7C2G1 150 aa4.89□□□□□ -1.63
CCDC144A-212ENST00000470068 PRIMA1Q86XR5 153 aa4.89□□□□□ -1.63
CCDC144A-212ENST00000470068 VOPP1Q96AW1 172 aa4.89□□□□□ -1.63
CCDC144A-212ENST00000470068 TM2D2Q9BX73 214 aa4.89□□□□□ -1.63
CCDC144A-212ENST00000470068 FRMPD3Q5JV73 1810 aa4.89□□□□□ -1.63
CCDC144A-212ENST00000470068 SRRM4A7MD48 611 aaKnown RBP4.89□□□□□ -1.63
CCDC144A-212ENST00000470068 PSPNO60542 156 aa4.89□□□□□ -1.63
CCDC144A-212ENST00000470068 TRACP01848 142 aa4.89□□□□□ -1.63
CCDC144A-212ENST00000470068 CRYGCP07315 174 aa4.89□□□□□ -1.63
CCDC144A-212ENST00000470068 HTN1P15515 57 aa4.89□□□□□ -1.63
CCDC144A-212ENST00000470068 C16orf74Q96GX8 76 aa4.89□□□□□ -1.63
CCDC144A-212ENST00000470068 KLK5Q9Y337 293 aaPredicted RBP4.89□□□□□ -1.63
CCDC144A-212ENST00000470068 SMIM9A6NGZ8 99 aa4.89□□□□□ -1.63
CCDC144A-212ENST00000470068 HTN3P15516 51 aa4.89□□□□□ -1.63
CCDC144A-212ENST00000470068 PLAURQ03405 335 aa4.89□□□□□ -1.63
CCDC144A-212ENST00000470068 C18orf15Q96N68 181 aa4.89□□□□□ -1.63
CCDC144A-212ENST00000470068 IGHV3-21A0A0B4J1V1 117 aa4.88□□□□□ -1.63
CCDC144A-212ENST00000470068 H3BMG7 143 aa4.88□□□□□ -1.63
CCDC144A-212ENST00000470068 PAX4O43316 350 aa4.88□□□□□ -1.63
CCDC144A-212ENST00000470068 SAP30O75446 220 aa4.88□□□□□ -1.63
CCDC144A-212ENST00000470068 PYYP10082 97 aa4.88□□□□□ -1.63
CCDC144A-212ENST00000470068 SRCAPQ6ZRS2 3230 aa4.88□□□□□ -1.63
CCDC144A-212ENST00000470068 CEND1Q8N111 149 aa4.88□□□□□ -1.63
CCDC144A-212ENST00000470068 GAGE12BA1L429 117 aa4.88□□□□□ -1.63
CCDC144A-212ENST00000470068 Q8NA96 180 aa4.88□□□□□ -1.63
CCDC144A-212ENST00000470068 AJUBAQ96IF1 538 aa4.88□□□□□ -1.63
CCDC144A-212ENST00000470068 TEP1Q99973 2627 aaKnown RBP4.88□□□□□ -1.63
CCDC144A-212ENST00000470068 A0A1B0GX51 115 aa4.88□□□□□ -1.63
CCDC144A-212ENST00000470068 FCN3O75636 299 aa4.88□□□□□ -1.63
CCDC144A-212ENST00000470068 NDUFC2O95298 119 aa4.88□□□□□ -1.63
CCDC144A-212ENST00000470068 CELA3AP09093 270 aa4.88□□□□□ -1.63
CCDC144A-212ENST00000470068 IGLC1P0CG04 106 aa4.88□□□□□ -1.63
CCDC144A-212ENST00000470068 C9orf66Q5T8R8 295 aa4.88□□□□□ -1.63
CCDC144A-212ENST00000470068 NYNRINQ9P2P1 1898 aaKnown RBP4.88□□□□□ -1.63
CCDC144A-212ENST00000470068 A0A0G2JNJ9 132 aa4.87□□□□□ -1.63
CCDC144A-212ENST00000470068 ARMS2P0C7Q2 107 aa4.87□□□□□ -1.63
CCDC144A-212ENST00000470068 EIF4EBP1Q13541 118 aaPredicted RBP4.87□□□□□ -1.63
CCDC144A-212ENST00000470068 SLC25A29Q8N8R3 303 aa4.87□□□□□ -1.63
CCDC144A-212ENST00000470068 KIR2DL5BQ8NHK3 375 aa4.87□□□□□ -1.63
CCDC144A-212ENST00000470068 DSCR8Q96T75 97 aa4.87□□□□□ -1.63
CCDC144A-212ENST00000470068 SCRT1Q9BWW7 348 aa4.87□□□□□ -1.63
CCDC144A-212ENST00000470068 KLK15Q9H2R5 256 aa4.87□□□□□ -1.63
CCDC144A-212ENST00000470068 Q9UFV3 132 aa4.87□□□□□ -1.63
CCDC144A-212ENST00000470068 LHBP01229 141 aa4.87□□□□□ -1.63
CCDC144A-212ENST00000470068 MYCNOSP40205 109 aa4.87□□□□□ -1.63
CCDC144A-212ENST00000470068 MRGPRG-AS1Q2M3A8 158 aa4.87□□□□□ -1.63
CCDC144A-212ENST00000470068 GPHB5Q86YW7 130 aa4.87□□□□□ -1.63
CCDC144A-212ENST00000470068 ANKRD29Q8N6D5 301 aa4.87□□□□□ -1.63
CCDC144A-212ENST00000470068 SNHG12Q9BXW3 62 aa4.87□□□□□ -1.63
CCDC144A-212ENST00000470068 TSSC4Q9Y5U2 329 aaPredicted RBP4.87□□□□□ -1.63
CCDC144A-212ENST00000470068 PLXNA2O75051 1894 aa4.87□□□□□ -1.63
CCDC144A-212ENST00000470068 NUP210Q8TEM1 1887 aaPredicted RBP4.87□□□□□ -1.63
CCDC144A-212ENST00000470068 TANC1Q9C0D5 1861 aa4.87□□□□□ -1.63
CCDC144A-212ENST00000470068 C9orf47Q6ZRZ4 202 aa4.87□□□□□ -1.63
CCDC144A-212ENST00000470068 ZNF580Q9UK33 172 aa4.87□□□□□ -1.63
CCDC144A-212ENST00000470068 IGKV1D-8A0A087WSZ0 117 aa4.87□□□□□ -1.63
CCDC144A-212ENST00000470068 TRAV5A0A0B4J249 113 aa4.87□□□□□ -1.63
CCDC144A-212ENST00000470068 IGHV1-58A0A0C4DH39 117 aa4.87□□□□□ -1.63
CCDC144A-212ENST00000470068 A0A1W2PPM0 123 aa4.87□□□□□ -1.63
CCDC144A-212ENST00000470068 ZNF561-AS1K7EIQ3 104 aa4.87□□□□□ -1.63
CCDC144A-212ENST00000470068 LY6G6CO95867 125 aa4.87□□□□□ -1.63
CCDC144A-212ENST00000470068 GTF3C1Q12789 2109 aa4.87□□□□□ -1.63
CCDC144A-212ENST00000470068 FAM219BQ5XKK7 198 aa4.87□□□□□ -1.63
CCDC144A-212ENST00000470068 TOMM7Q9P0U1 55 aa4.87□□□□□ -1.63
CCDC144A-212ENST00000470068 TRAV40A0A0B4J280 105 aa4.86□□□□□ -1.63
CCDC144A-212ENST00000470068 SDHAF1A6NFY7 115 aa4.86□□□□□ -1.63
CCDC144A-212ENST00000470068 WIPF3A6NGB9 483 aa4.86□□□□□ -1.63
CCDC144A-212ENST00000470068 LOXP28300 417 aaPredicted RBP4.86□□□□□ -1.63
CCDC144A-212ENST00000470068 GNG5P63218 68 aa4.86□□□□□ -1.63
CCDC144A-212ENST00000470068 C17orf58Q2M2W7 97 aa4.86□□□□□ -1.63
CCDC144A-212ENST00000470068 DEFB125Q8N687 156 aa4.86□□□□□ -1.63
CCDC144A-212ENST00000470068 GATD1Q8NB37 220 aa4.86□□□□□ -1.63
CCDC144A-212ENST00000470068 PRR14LQ5THK1 2151 aa4.86□□□□□ -1.63
CCDC144A-212ENST00000470068 DOCK6Q96HP0 2047 aa4.86□□□□□ -1.63
CCDC144A-212ENST00000470068 LINC00473A8K010 186 aa4.86□□□□□ -1.63
CCDC144A-212ENST00000470068 CTRLP40313 264 aa4.86□□□□□ -1.63
CCDC144A-212ENST00000470068 ATRAIDQ6UW56 229 aa4.86□□□□□ -1.63
CCDC144A-212ENST00000470068 FAM19A2Q8N3H0 131 aa4.86□□□□□ -1.63
CCDC144A-212ENST00000470068 NKAPP1Q8N9T2 125 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms