RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 COL5A1-AS1Q5SY13 56 aa13.75□□□□□ -0.21
MCF2L-221ENST00000469415 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.75□□□□□ -0.21
MCF2L-221ENST00000469415 CCL19Q99731 98 aa13.75□□□□□ -0.21
MCF2L-221ENST00000469415 KLK15Q9H2R5 256 aa13.75□□□□□ -0.21
MCF2L-221ENST00000469415 CLPSL1A2RUU4 121 aa13.74□□□□□ -0.21
MCF2L-221ENST00000469415 PF4V1P10720 104 aa13.74□□□□□ -0.21
MCF2L-221ENST00000469415 FOXE3Q13461 319 aa13.74□□□□□ -0.21
MCF2L-221ENST00000469415 C5orf56Q8N8D9 126 aa13.74□□□□□ -0.21
MCF2L-221ENST00000469415 AGPAT4-IT1Q9H0P7 198 aa13.74□□□□□ -0.21
MCF2L-221ENST00000469415 IGHV4-30-2A0A087WSY4 118 aa13.74□□□□□ -0.21
MCF2L-221ENST00000469415 TRAV41A0A0B4J266 112 aa13.74□□□□□ -0.21
MCF2L-221ENST00000469415 EEF1AKMT3Q96AZ1 226 aa13.74□□□□□ -0.21
MCF2L-221ENST00000469415 METTL26Q96S19 204 aa13.74□□□□□ -0.21
MCF2L-221ENST00000469415 UFC1Q9Y3C8 167 aa13.74□□□□□ -0.21
MCF2L-221ENST00000469415 HSBP1L1C9JCN9 74 aa13.74□□□□□ -0.21
MCF2L-221ENST00000469415 MPV17L2Q567V2 206 aa13.74□□□□□ -0.21
MCF2L-221ENST00000469415 FAM104BQ5XKR9 115 aa13.74□□□□□ -0.21
MCF2L-221ENST00000469415 C16orf54Q6UWD8 224 aa13.74□□□□□ -0.21
MCF2L-221ENST00000469415 C16orf92Q96LL3 132 aa13.74□□□□□ -0.21
MCF2L-221ENST00000469415 TMEM191AQ9H0A3 160 aa13.73□□□□□ -0.21
MCF2L-221ENST00000469415 TRAV26-2A0A0B4J265 109 aa13.73□□□□□ -0.21
MCF2L-221ENST00000469415 PRB1P04280 392 aa13.73□□□□□ -0.21
MCF2L-221ENST00000469415 F6UB75 175 aa13.72□□□□□ -0.21
MCF2L-221ENST00000469415 ORMDL3Q8N138 153 aa13.72□□□□□ -0.21
MCF2L-221ENST00000469415 C11orf21Q9P2W6 132 aa13.72□□□□□ -0.21
MCF2L-221ENST00000469415 C8orf86Q6ZUL3 223 aa13.72□□□□□ -0.21
MCF2L-221ENST00000469415 PRORYQ9H606 182 aa13.72□□□□□ -0.21
MCF2L-221ENST00000469415 WNK1Q9H4A3 2382 aa13.72□□□□□ -0.21
MCF2L-221ENST00000469415 A0A087X0K7 114 aa13.72□□□□□ -0.21
MCF2L-221ENST00000469415 FABP5P3A8MUU1 101 aa13.72□□□□□ -0.21
MCF2L-221ENST00000469415 NUDT3O95989 172 aa13.72□□□□□ -0.21
MCF2L-221ENST00000469415 ARL3P36405 182 aa13.71□□□□□ -0.21
MCF2L-221ENST00000469415 OR10AG1Q8NH19 301 aa13.71□□□□□ -0.21
MCF2L-221ENST00000469415 A1L4Q6 167 aa13.71□□□□□ -0.22
MCF2L-221ENST00000469415 SMAD7O15105 426 aaKnown RBP13.71□□□□□ -0.22
MCF2L-221ENST00000469415 EDN2P20800 178 aa13.71□□□□□ -0.22
MCF2L-221ENST00000469415 BMI1P35226 326 aa13.71□□□□□ -0.22
MCF2L-221ENST00000469415 HSPB8Q9UJY1 196 aa13.71□□□□□ -0.22
MCF2L-221ENST00000469415 CACNG7P62955 275 aa13.7□□□□□ -0.22
MCF2L-221ENST00000469415 PAX8Q06710 450 aa13.7□□□□□ -0.22
MCF2L-221ENST00000469415 GAGE1Q13065 139 aa13.7□□□□□ -0.22
MCF2L-221ENST00000469415 TMEM78Q5T7P6 136 aa13.7□□□□□ -0.22
MCF2L-221ENST00000469415 ZNF48Q96MX3 618 aaPredicted RBP13.7□□□□□ -0.22
MCF2L-221ENST00000469415 IGHV1-69DA0A0B4J2H0 117 aa13.7□□□□□ -0.22
MCF2L-221ENST00000469415 IGHV1-69P01742 117 aa13.7□□□□□ -0.22
MCF2L-221ENST00000469415 ZNF738Q8NE65 137 aa13.7□□□□□ -0.22
MCF2L-221ENST00000469415 PIFOQ8TCI5 191 aa13.7□□□□□ -0.22
MCF2L-221ENST00000469415 ZNF747Q9BV97 191 aa13.7□□□□□ -0.22
MCF2L-221ENST00000469415 KIR3DS1Q14943 382 aa13.69□□□□□ -0.22
MCF2L-221ENST00000469415 TRAV8-2A0A0B4J237 113 aa13.69□□□□□ -0.22
MCF2L-221ENST00000469415 AVPP01185 164 aa13.69□□□□□ -0.22
MCF2L-221ENST00000469415 PIMREGQ9BSJ6 248 aa13.69□□□□□ -0.22
MCF2L-221ENST00000469415 MOB4Q9Y3A3 225 aa13.69□□□□□ -0.22
MCF2L-221ENST00000469415 A0A096LNJ9 63 aa13.68□□□□□ -0.22
MCF2L-221ENST00000469415 IGKV3D-20A0A0C4DH25 116 aa13.68□□□□□ -0.22
MCF2L-221ENST00000469415 TRBV6-1A0A0K0K1D8 114 aa13.68□□□□□ -0.22
MCF2L-221ENST00000469415 RIPPLY3P57055 190 aa13.68□□□□□ -0.22
MCF2L-221ENST00000469415 USP24Q9UPU5 2620 aa13.68□□□□□ -0.22
MCF2L-221ENST00000469415 ZNF575Q86XF7 245 aa13.68□□□□□ -0.22
MCF2L-221ENST00000469415 C10orf99Q6UWK7 81 aa13.67□□□□□ -0.22
MCF2L-221ENST00000469415 HIF1ANQ9NWT6 349 aa13.67□□□□□ -0.22
MCF2L-221ENST00000469415 Q6AWC8 147 aa13.67□□□□□ -0.22
MCF2L-221ENST00000469415 SLC25A34Q6PIV7 304 aa13.67□□□□□ -0.22
MCF2L-221ENST00000469415 C20orf173Q96LM9 149 aa13.67□□□□□ -0.22
MCF2L-221ENST00000469415 MXRA5Q9NR99 2828 aa13.67□□□□□ -0.22
MCF2L-221ENST00000469415 H3BVH4 76 aa13.66□□□□□ -0.22
MCF2L-221ENST00000469415 OR4C5Q8NGB2 326 aa13.66□□□□□ -0.22
MCF2L-221ENST00000469415 TEX15Q9BXT5 2789 aa13.66□□□□□ -0.22
MCF2L-221ENST00000469415 TM4SF20Q53R12 229 aa13.66□□□□□ -0.22
MCF2L-221ENST00000469415 M0R381 172 aa13.66□□□□□ -0.22
MCF2L-221ENST00000469415 PRR9Q5T870 116 aa13.66□□□□□ -0.22
MCF2L-221ENST00000469415 FBN2P35556 2912 aa13.65□□□□□ -0.22
MCF2L-221ENST00000469415 IGKV3-20P01619 116 aa13.65□□□□□ -0.22
MCF2L-221ENST00000469415 HIST1H1AQ02539 215 aaPredicted RBP13.65□□□□□ -0.22
MCF2L-221ENST00000469415 SPANXN1Q5VSR9 72 aa13.65□□□□□ -0.22
MCF2L-221ENST00000469415 HIST2H2BDQ6DRA6 164 aa13.64□□□□□ -0.23
MCF2L-221ENST00000469415 PET117Q6UWS5 81 aa13.64□□□□□ -0.23
MCF2L-221ENST00000469415 TRBV7-1A0A0A6YYK4 115 aa13.64□□□□□ -0.23
MCF2L-221ENST00000469415 IGLC6P0CF74 106 aa13.64□□□□□ -0.23
MCF2L-221ENST00000469415 TTTY13Q9BZ97 58 aa13.64□□□□□ -0.23
MCF2L-221ENST00000469415 DKK2Q9UBU2 259 aa13.64□□□□□ -0.23
MCF2L-221ENST00000469415 NMUP48645 174 aa13.64□□□□□ -0.23
MCF2L-221ENST00000469415 VAMP3Q15836 100 aa13.64□□□□□ -0.23
MCF2L-221ENST00000469415 DUX5Q96PT3 197 aa13.64□□□□□ -0.23
MCF2L-221ENST00000469415 LEPP41159 167 aa13.63□□□□□ -0.23
MCF2L-221ENST00000469415 ZNF493Q6ZR52 646 aa13.63□□□□□ -0.23
MCF2L-221ENST00000469415 NAA38Q9BRA0 125 aaKnown RBP13.63□□□□□ -0.23
MCF2L-221ENST00000469415 CRXO43186 299 aaPredicted RBP13.63□□□□□ -0.23
MCF2L-221ENST00000469415 C10orf105Q8TEF2 133 aa13.63□□□□□ -0.23
MCF2L-221ENST00000469415 PRSS1P07477 247 aa13.62□□□□□ -0.23
MCF2L-221ENST00000469415 OR4X2Q8NGF9 303 aa13.62□□□□□ -0.23
MCF2L-221ENST00000469415 RNF185Q96GF1 192 aa13.62□□□□□ -0.23
MCF2L-221ENST00000469415 SLC50A1Q9BRV3 221 aa13.62□□□□□ -0.23
MCF2L-221ENST00000469415 AGRNO00468 2067 aa13.62□□□□□ -0.23
MCF2L-221ENST00000469415 A0A1B0GW15 77 aa13.62□□□□□ -0.23
MCF2L-221ENST00000469415 TNFRSF6BO95407 300 aa13.62□□□□□ -0.23
MCF2L-221ENST00000469415 ACANP16112 2415 aa13.62□□□□□ -0.23
MCF2L-221ENST00000469415 S100A4P26447 101 aaKnown RBP13.61□□□□□ -0.23
MCF2L-221ENST00000469415 ST20Q9HBF5 79 aa13.61□□□□□ -0.23
MCF2L-221ENST00000469415 MRPS16Q9Y3D3 137 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms