RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 EML6Q6ZMW3 1958 aa3.79□□□□□ -1.8
SF3B1-207ENST00000468925 ANKRD11Q6UB99 2663 aaPredicted RBP3.79□□□□□ -1.8
SF3B1-207ENST00000468925 PTPRSQ13332 1948 aa3.79□□□□□ -1.8
SF3B1-207ENST00000468925 PCSK5Q92824 1860 aa3.79□□□□□ -1.8
SF3B1-207ENST00000468925 SETXQ7Z333 2677 aaKnown RBP3.78□□□□□ -1.8
SF3B1-207ENST00000468925 SPTBN4Q9H254 2564 aa3.78□□□□□ -1.8
SF3B1-207ENST00000468925 USF3Q68DE3 2245 aa3.78□□□□□ -1.8
SF3B1-207ENST00000468925 TRAV40A0A0B4J280 105 aa3.78□□□□□ -1.8
SF3B1-207ENST00000468925 IGHV1-69DA0A0B4J2H0 117 aa3.78□□□□□ -1.8
SF3B1-207ENST00000468925 LOC389332A0A1B0GUA5 103 aa3.78□□□□□ -1.8
SF3B1-207ENST00000468925 F5H697 171 aa3.78□□□□□ -1.8
SF3B1-207ENST00000468925 C16orf97H3BN30 126 aa3.78□□□□□ -1.8
SF3B1-207ENST00000468925 NDUFC2O95298 119 aa3.78□□□□□ -1.8
SF3B1-207ENST00000468925 FSTL3O95633 263 aa3.78□□□□□ -1.8
SF3B1-207ENST00000468925 CFC1BP0CG36 223 aa3.78□□□□□ -1.8
SF3B1-207ENST00000468925 CFC1P0CG37 223 aa3.78□□□□□ -1.8
SF3B1-207ENST00000468925 LIFP15018 202 aa3.78□□□□□ -1.8
SF3B1-207ENST00000468925 PPP1CAP62136 330 aa3.78□□□□□ -1.8
SF3B1-207ENST00000468925 CCL8P80075 99 aa3.78□□□□□ -1.8
SF3B1-207ENST00000468925 MRPS36P82909 103 aaKnown RBP3.78□□□□□ -1.8
SF3B1-207ENST00000468925 KRTAP15-1Q3LI76 137 aa3.78□□□□□ -1.8
SF3B1-207ENST00000468925 LINC01620Q4KN68 170 aa3.78□□□□□ -1.8
SF3B1-207ENST00000468925 SPINK9Q5DT21 86 aa3.78□□□□□ -1.8
SF3B1-207ENST00000468925 SIGLEC15Q6ZMC9 328 aa3.78□□□□□ -1.8
SF3B1-207ENST00000468925 SLC22A18ASQ8N1D0 253 aa3.78□□□□□ -1.8
SF3B1-207ENST00000468925 SLC25A29Q8N8R3 303 aa3.78□□□□□ -1.8
SF3B1-207ENST00000468925 NTN5Q8WTR8 489 aaPredicted RBP3.78□□□□□ -1.8
SF3B1-207ENST00000468925 DEFB126Q9BYW3 111 aa3.78□□□□□ -1.8
SF3B1-207ENST00000468925 EDA2RQ9HAV5 297 aa3.78□□□□□ -1.8
SF3B1-207ENST00000468925 CALYQ9NYX4 217 aa3.78□□□□□ -1.8
SF3B1-207ENST00000468925 MRPL35Q9NZE8 188 aaKnown RBP3.78□□□□□ -1.8
SF3B1-207ENST00000468925 GNG12Q9UBI6 72 aa3.78□□□□□ -1.8
SF3B1-207ENST00000468925 LAMTOR3Q9UHA4 124 aa3.78□□□□□ -1.8
SF3B1-207ENST00000468925 SELENOKQ9Y6D0 94 aa3.78□□□□□ -1.8
SF3B1-207ENST00000468925 HCFC1P51610 2035 aa3.78□□□□□ -1.8
SF3B1-207ENST00000468925 ZFHX4Q86UP3 3567 aa3.78□□□□□ -1.8
SF3B1-207ENST00000468925 ATRXP46100 2492 aa3.78□□□□□ -1.8
SF3B1-207ENST00000468925 HEATR1Q9H583 2144 aaKnown RBP3.77□□□□□ -1.81
SF3B1-207ENST00000468925 CHD6Q8TD26 2715 aa3.77□□□□□ -1.81
SF3B1-207ENST00000468925 IGKV1OR2-108A0A075B7D4 117 aa3.77□□□□□ -1.81
SF3B1-207ENST00000468925 A0A0A0MQY5 61 aa3.77□□□□□ -1.81
SF3B1-207ENST00000468925 TRAV17A0A0B4J275 112 aa3.77□□□□□ -1.81
SF3B1-207ENST00000468925 A0A0J9YX75 114 aa3.77□□□□□ -1.81
SF3B1-207ENST00000468925 SPTY2D1-AS1A0A0U1RR47 76 aa3.77□□□□□ -1.81
SF3B1-207ENST00000468925 FAM236AA0A1B0GUQ0 79 aa3.77□□□□□ -1.81
SF3B1-207ENST00000468925 FAM236BA0A1B0GV22 79 aa3.77□□□□□ -1.81
SF3B1-207ENST00000468925 ZNF815PA8K554 130 aa3.77□□□□□ -1.81
SF3B1-207ENST00000468925 IQCF6A8MYZ5 107 aa3.77□□□□□ -1.81
SF3B1-207ENST00000468925 K7ENP7 123 aa3.77□□□□□ -1.81
SF3B1-207ENST00000468925 BCE1O60756 84 aa3.77□□□□□ -1.81
SF3B1-207ENST00000468925 MRPL33O75394 65 aaKnown RBP3.77□□□□□ -1.81
SF3B1-207ENST00000468925 PYYP10082 97 aa3.77□□□□□ -1.81
SF3B1-207ENST00000468925 GP9P14770 177 aa3.77□□□□□ -1.81
SF3B1-207ENST00000468925 PSMB8P28062 276 aa3.77□□□□□ -1.81
SF3B1-207ENST00000468925 ZNF56Q15929 161 aa3.77□□□□□ -1.81
SF3B1-207ENST00000468925 PVRIGQ6DKI7 326 aa3.77□□□□□ -1.81
SF3B1-207ENST00000468925 LYZL1Q6UWQ5 148 aa3.77□□□□□ -1.81
SF3B1-207ENST00000468925 C2orf82Q6UX34 121 aa3.77□□□□□ -1.81
SF3B1-207ENST00000468925 LINC00322Q6ZN03 302 aaPredicted RBP3.77□□□□□ -1.81
SF3B1-207ENST00000468925 ZFP2Q6ZN57 461 aa3.77□□□□□ -1.81
SF3B1-207ENST00000468925 PRNTQ86SH4 94 aa3.77□□□□□ -1.81
SF3B1-207ENST00000468925 POM121L12Q8N7R1 296 aa3.77□□□□□ -1.81
SF3B1-207ENST00000468925 MAPKAPK5-AS1Q8N8E1 139 aa3.77□□□□□ -1.81
SF3B1-207ENST00000468925 CCL4L1Q8NHW4 92 aa3.77□□□□□ -1.81
SF3B1-207ENST00000468925 FGFBP3Q8TAT2 258 aa3.77□□□□□ -1.81
SF3B1-207ENST00000468925 PLEKHB2Q96CS7 222 aa3.77□□□□□ -1.81
SF3B1-207ENST00000468925 CHCHD5Q9BSY4 110 aa3.77□□□□□ -1.81
SF3B1-207ENST00000468925 FGF23Q9GZV9 251 aaPredicted RBP3.77□□□□□ -1.81
SF3B1-207ENST00000468925 CXXC4Q9H2H0 198 aa3.77□□□□□ -1.81
SF3B1-207ENST00000468925 NDUFA4L2Q9NRX3 87 aa3.77□□□□□ -1.81
SF3B1-207ENST00000468925 KLF13Q9Y2Y9 288 aaPredicted RBP3.77□□□□□ -1.81
SF3B1-207ENST00000468925 CFAP47Q6ZTR5 3102 aa3.77□□□□□ -1.81
SF3B1-207ENST00000468925 MYO9BQ13459 2157 aa3.77□□□□□ -1.81
SF3B1-207ENST00000468925 TRANK1O15050 2925 aa3.77□□□□□ -1.81
SF3B1-207ENST00000468925 USP34Q70CQ2 3546 aa3.77□□□□□ -1.81
SF3B1-207ENST00000468925 RP1P56715 2156 aa3.76□□□□□ -1.81
SF3B1-207ENST00000468925 KMT2BQ9UMN6 2715 aaPredicted RBP3.76□□□□□ -1.81
SF3B1-207ENST00000468925 ARHGEF17Q96PE2 2063 aaPredicted RBP3.76□□□□□ -1.81
SF3B1-207ENST00000468925 TRGV11A0A075B6L2 103 aa3.76□□□□□ -1.81
SF3B1-207ENST00000468925 TMEM89A2RUT3 159 aa3.76□□□□□ -1.81
SF3B1-207ENST00000468925 VCYO14598 125 aa3.76□□□□□ -1.81
SF3B1-207ENST00000468925 RS1O15537 224 aa3.76□□□□□ -1.81
SF3B1-207ENST00000468925 TRIAP1O43715 76 aa3.76□□□□□ -1.81
SF3B1-207ENST00000468925 INAFM2P0DMQ5 153 aa3.76□□□□□ -1.81
SF3B1-207ENST00000468925 GNG5P63218 68 aa3.76□□□□□ -1.81
SF3B1-207ENST00000468925 ANXA2RQ3ZCQ2 193 aa3.76□□□□□ -1.81
SF3B1-207ENST00000468925 TMEM155Q4W5P6 130 aa3.76□□□□□ -1.81
SF3B1-207ENST00000468925 PATE2Q6UY27 113 aa3.76□□□□□ -1.81
SF3B1-207ENST00000468925 SDIM1Q6ZPB5 146 aa3.76□□□□□ -1.81
SF3B1-207ENST00000468925 C5orf38Q86SI9 138 aa3.76□□□□□ -1.81
SF3B1-207ENST00000468925 TRPT1Q86TN4 253 aaKnown RBP3.76□□□□□ -1.81
SF3B1-207ENST00000468925 C17orf82Q86X59 251 aaPredicted RBP3.76□□□□□ -1.81
SF3B1-207ENST00000468925 STHQ8IWL8 128 aa3.76□□□□□ -1.81
SF3B1-207ENST00000468925 TDHQ8IZJ6 230 aa3.76□□□□□ -1.81
SF3B1-207ENST00000468925 DAND5Q8N907 189 aa3.76□□□□□ -1.81
SF3B1-207ENST00000468925 DPH3Q96FX2 82 aa3.76□□□□□ -1.81
SF3B1-207ENST00000468925 PRR25Q96S07 402 aa3.76□□□□□ -1.81
SF3B1-207ENST00000468925 ZNF71Q9NQZ8 489 aaPredicted RBP3.76□□□□□ -1.81
SF3B1-207ENST00000468925 V9GYY9 64 aa3.76□□□□□ -1.81
SF3B1-207ENST00000468925 LRP4O75096 1905 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms