RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 NEGR1Q7Z3B1 354 aa12.19□□□□□ -0.46
TSPAN4-211ENST00000468468 SIRPDQ9H106 197 aa12.19□□□□□ -0.46
TSPAN4-211ENST00000468468 MAP1LC3AQ9H492 121 aa12.19□□□□□ -0.46
TSPAN4-211ENST00000468468 BUB3O43684 328 aa12.19□□□□□ -0.46
TSPAN4-211ENST00000468468 GAS8-AS1O95177 125 aa12.19□□□□□ -0.46
TSPAN4-211ENST00000468468 PPIFP30405 207 aaKnown RBP12.19□□□□□ -0.46
TSPAN4-211ENST00000468468 BOD1L2Q8IYS8 172 aa12.19□□□□□ -0.46
TSPAN4-211ENST00000468468 ZFAND3Q9H8U3 227 aa12.19□□□□□ -0.46
TSPAN4-211ENST00000468468 SEC11AP67812 179 aa12.18□□□□□ -0.46
TSPAN4-211ENST00000468468 CFAP46Q8IYW2 2715 aa12.18□□□□□ -0.46
TSPAN4-211ENST00000468468 ATP6V0E1O15342 81 aa12.18□□□□□ -0.46
TSPAN4-211ENST00000468468 IL17RELQ6ZVW7 336 aa12.18□□□□□ -0.46
TSPAN4-211ENST00000468468 RAB37Q96AX2 223 aa12.18□□□□□ -0.46
TSPAN4-211ENST00000468468 C18orf15Q96N68 181 aa12.18□□□□□ -0.46
TSPAN4-211ENST00000468468 PSMG3-AS1Q96PY0 264 aa12.18□□□□□ -0.46
TSPAN4-211ENST00000468468 CNFNQ9BYD5 112 aa12.18□□□□□ -0.46
TSPAN4-211ENST00000468468 SPTAN1Q13813 2472 aaKnown RBP12.18□□□□□ -0.46
TSPAN4-211ENST00000468468 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.18□□□□□ -0.46
TSPAN4-211ENST00000468468 GTF2H5Q6ZYL4 71 aa12.18□□□□□ -0.46
TSPAN4-211ENST00000468468 WNK2Q9Y3S1 2297 aa12.17□□□□□ -0.46
TSPAN4-211ENST00000468468 IGHV3OR16-13A0A075B7E8 117 aa12.17□□□□□ -0.46
TSPAN4-211ENST00000468468 IGHV3-74A0A0B4J1X5 117 aa12.17□□□□□ -0.46
TSPAN4-211ENST00000468468 SMAD7O15105 426 aaKnown RBP12.17□□□□□ -0.46
TSPAN4-211ENST00000468468 RAB9AP51151 201 aa12.17□□□□□ -0.46
TSPAN4-211ENST00000468468 LINC01559Q495D7 138 aa12.17□□□□□ -0.46
TSPAN4-211ENST00000468468 DKK2Q9UBU2 259 aa12.17□□□□□ -0.46
TSPAN4-211ENST00000468468 SMPXQ9UHP9 88 aa12.17□□□□□ -0.46
TSPAN4-211ENST00000468468 K7EP34 96 aa12.17□□□□□ -0.46
TSPAN4-211ENST00000468468 RPL24P83731 157 aaKnown RBP12.17□□□□□ -0.46
TSPAN4-211ENST00000468468 CLEC19AQ6UXS0 136 aa12.17□□□□□ -0.46
TSPAN4-211ENST00000468468 A1L4Q6 167 aa12.16□□□□□ -0.46
TSPAN4-211ENST00000468468 TNFRSF6BO95407 300 aa12.16□□□□□ -0.46
TSPAN4-211ENST00000468468 EVI2AP22794 236 aa12.16□□□□□ -0.46
TSPAN4-211ENST00000468468 AP1S3Q96PC3 154 aa12.16□□□□□ -0.46
TSPAN4-211ENST00000468468 TEX48A0A1B0GUV7 120 aa12.16□□□□□ -0.46
TSPAN4-211ENST00000468468 LEPP41159 167 aa12.16□□□□□ -0.46
TSPAN4-211ENST00000468468 NMUP48645 174 aa12.16□□□□□ -0.46
TSPAN4-211ENST00000468468 ATP6V0BQ99437 205 aa12.16□□□□□ -0.46
TSPAN4-211ENST00000468468 SLC50A1Q9BRV3 221 aa12.16□□□□□ -0.46
TSPAN4-211ENST00000468468 NPFFR1Q9GZQ6 430 aa12.16□□□□□ -0.46
TSPAN4-211ENST00000468468 TRAV26-1A0A087WT03 109 aa12.15□□□□□ -0.46
TSPAN4-211ENST00000468468 A0A1B0GV72 72 aa12.15□□□□□ -0.46
TSPAN4-211ENST00000468468 RBAKDNA6NC62 111 aa12.15□□□□□ -0.46
TSPAN4-211ENST00000468468 G3V318 75 aa12.15□□□□□ -0.46
TSPAN4-211ENST00000468468 EFNA4P52798 201 aa12.15□□□□□ -0.46
TSPAN4-211ENST00000468468 OR9G4Q8NGQ1 327 aa12.15□□□□□ -0.46
TSPAN4-211ENST00000468468 AJUBAQ96IF1 538 aa12.15□□□□□ -0.46
TSPAN4-211ENST00000468468 IGHV3-49A0A0A0MS15 119 aa12.15□□□□□ -0.46
TSPAN4-211ENST00000468468 CLPSL1A2RUU4 121 aa12.15□□□□□ -0.46
TSPAN4-211ENST00000468468 GATA1P15976 413 aaPredicted RBP12.15□□□□□ -0.46
TSPAN4-211ENST00000468468 UBE2E1P51965 193 aa12.15□□□□□ -0.46
TSPAN4-211ENST00000468468 SCGB2A2Q13296 93 aa12.15□□□□□ -0.46
TSPAN4-211ENST00000468468 CCDC140Q96MF4 163 aa12.15□□□□□ -0.46
TSPAN4-211ENST00000468468 BPESC1Q9GZL8 116 aa12.15□□□□□ -0.46
TSPAN4-211ENST00000468468 AGPAT4-IT1Q9H0P7 198 aa12.15□□□□□ -0.46
TSPAN4-211ENST00000468468 IGKV3D-20A0A0C4DH25 116 aa12.14□□□□□ -0.47
TSPAN4-211ENST00000468468 LINC01548A6NM66 108 aa12.14□□□□□ -0.47
TSPAN4-211ENST00000468468 FCER1GP30273 86 aa12.14□□□□□ -0.47
TSPAN4-211ENST00000468468 TMEM95Q3KNT9 176 aa12.14□□□□□ -0.47
TSPAN4-211ENST00000468468 PCP2Q8IVA1 136 aa12.14□□□□□ -0.47
TSPAN4-211ENST00000468468 OR2K2Q8NGT1 345 aa12.14□□□□□ -0.47
TSPAN4-211ENST00000468468 NXT2Q9NPJ8 142 aaKnown RBP12.14□□□□□ -0.47
TSPAN4-211ENST00000468468 A6NDN8 102 aa12.14□□□□□ -0.47
TSPAN4-211ENST00000468468 LINC01546A6NGU7 62 aa12.14□□□□□ -0.47
TSPAN4-211ENST00000468468 C9orf118A6NHY6 69 aa12.14□□□□□ -0.47
TSPAN4-211ENST00000468468 SAA4P35542 130 aa12.14□□□□□ -0.47
TSPAN4-211ENST00000468468 SIVA1O15304 175 aa12.13□□□□□ -0.47
TSPAN4-211ENST00000468468 HSD52Q0P140 79 aa12.13□□□□□ -0.47
TSPAN4-211ENST00000468468 C11orf21Q9P2W6 132 aa12.13□□□□□ -0.47
TSPAN4-211ENST00000468468 VPS13CQ709C8 3753 aa12.13□□□□□ -0.47
TSPAN4-211ENST00000468468 IGSF10Q6WRI0 2623 aa12.13□□□□□ -0.47
TSPAN4-211ENST00000468468 A0A0G2JLM5 398 aa12.13□□□□□ -0.47
TSPAN4-211ENST00000468468 KLK9Q2XQG4 91 aa12.13□□□□□ -0.47
TSPAN4-211ENST00000468468 OR4X2Q8NGF9 303 aa12.13□□□□□ -0.47
TSPAN4-211ENST00000468468 EEF1AKMT3Q96AZ1 226 aa12.13□□□□□ -0.47
TSPAN4-211ENST00000468468 KLK9Q9UKQ9 250 aa12.13□□□□□ -0.47
TSPAN4-211ENST00000468468 ACACBO00763 2458 aa12.12□□□□□ -0.47
TSPAN4-211ENST00000468468 TRAV8-2A0A0B4J237 113 aa12.12□□□□□ -0.47
TSPAN4-211ENST00000468468 H3BRM9 83 aa12.12□□□□□ -0.47
TSPAN4-211ENST00000468468 CRYBA4P53673 196 aa12.12□□□□□ -0.47
TSPAN4-211ENST00000468468 TMEM78Q5T7P6 136 aa12.12□□□□□ -0.47
TSPAN4-211ENST00000468468 ADAMTSL5Q6ZMM2 481 aa12.12□□□□□ -0.47
TSPAN4-211ENST00000468468 SIGMAR1Q99720 223 aa12.12□□□□□ -0.47
TSPAN4-211ENST00000468468 PRSS1P07477 247 aa12.12□□□□□ -0.47
TSPAN4-211ENST00000468468 KIR3DS1Q14943 382 aa12.12□□□□□ -0.47
TSPAN4-211ENST00000468468 METTL26Q96S19 204 aa12.12□□□□□ -0.47
TSPAN4-211ENST00000468468 TSSC4Q9Y5U2 329 aaPredicted RBP12.12□□□□□ -0.47
TSPAN4-211ENST00000468468 SPCS1Q9Y6A9 102 aa12.12□□□□□ -0.47
TSPAN4-211ENST00000468468 TRGV3P03979 118 aa12.11□□□□□ -0.47
TSPAN4-211ENST00000468468 ODF1Q14990 250 aa12.11□□□□□ -0.47
TSPAN4-211ENST00000468468 LMO4P61968 165 aa12.11□□□□□ -0.47
TSPAN4-211ENST00000468468 C8orf86Q6ZUL3 223 aa12.11□□□□□ -0.47
TSPAN4-211ENST00000468468 TMEM158Q8WZ71 300 aa12.11□□□□□ -0.47
TSPAN4-211ENST00000468468 TRBV7-1A0A0A6YYK4 115 aa12.1□□□□□ -0.47
TSPAN4-211ENST00000468468 CENPVL3A0A0U1RRI6 287 aa12.1□□□□□ -0.47
TSPAN4-211ENST00000468468 CKS1BP61024 79 aa12.1□□□□□ -0.47
TSPAN4-211ENST00000468468 Q8N8P6 123 aa12.1□□□□□ -0.47
TSPAN4-211ENST00000468468 IGHV4-39P01824 125 aa12.09□□□□□ -0.47
TSPAN4-211ENST00000468468 ZMAT4Q9H898 229 aa12.09□□□□□ -0.47
TSPAN4-211ENST00000468468 ZFHX3Q15911 3703 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms