RNA–Protein interactions for RNA: ENST00000468384.1

HMGB1-207, Transcript of high mobility group box 1, humanhuman

TSL 1 (best)

Gene HMGB1, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1-207ENST00000468384 CDNFQ49AH0 187 aa2.7□□□□□ -1.98
HMGB1-207ENST00000468384 SLC51BQ86UW2 128 aa2.7□□□□□ -1.98
HMGB1-207ENST00000468384 PDPNQ86YL7 162 aa2.7□□□□□ -1.98
HMGB1-207ENST00000468384 OR11H7Q8NGC8 314 aa2.7□□□□□ -1.98
HMGB1-207ENST00000468384 OR4K13Q8NH42 304 aa2.7□□□□□ -1.98
HMGB1-207ENST00000468384 VSTM2AQ8TAG5 236 aa2.7□□□□□ -1.98
HMGB1-207ENST00000468384 ASB13Q8WXK3 278 aa2.7□□□□□ -1.98
HMGB1-207ENST00000468384 METTL26Q96S19 204 aa2.7□□□□□ -1.98
HMGB1-207ENST00000468384 FAAP24Q9BTP7 215 aa2.7□□□□□ -1.98
HMGB1-207ENST00000468384 IFI27L2Q9H2X8 130 aa2.7□□□□□ -1.98
HMGB1-207ENST00000468384 DIABLOQ9NR28 239 aa2.7□□□□□ -1.98
HMGB1-207ENST00000468384 RAB26Q9ULW5 256 aa2.7□□□□□ -1.98
HMGB1-207ENST00000468384 TRAV8-6A0A0B4J262 113 aa2.69□□□□□ -1.98
HMGB1-207ENST00000468384 IGHV3OR16-9A0A0B4J2B5 98 aa2.69□□□□□ -1.98
HMGB1-207ENST00000468384 EVPLLA8MZ36 301 aa2.69□□□□□ -1.98
HMGB1-207ENST00000468384 DISC1C4P0D8 188 aa2.69□□□□□ -1.98
HMGB1-207ENST00000468384 SPAG7O75391 227 aa2.69□□□□□ -1.98
HMGB1-207ENST00000468384 MT-ND4P03905 459 aa2.69□□□□□ -1.98
HMGB1-207ENST00000468384 DEFA4P12838 97 aa2.69□□□□□ -1.98
HMGB1-207ENST00000468384 AKR1C4P17516 323 aa2.69□□□□□ -1.98
HMGB1-207ENST00000468384 RAB3BP20337 219 aa2.69□□□□□ -1.98
HMGB1-207ENST00000468384 SRIP30626 198 aa2.69□□□□□ -1.98
HMGB1-207ENST00000468384 SULT1A1P50225 295 aa2.69□□□□□ -1.98
HMGB1-207ENST00000468384 SULT1A2P50226 295 aa2.69□□□□□ -1.98
HMGB1-207ENST00000468384 ZNF138P52744 262 aa2.69□□□□□ -1.98
HMGB1-207ENST00000468384 TAS2R46P59540 309 aa2.69□□□□□ -1.98
HMGB1-207ENST00000468384 NAA20P61599 178 aa2.69□□□□□ -1.98
HMGB1-207ENST00000468384 EMX2Q04743 252 aa2.69□□□□□ -1.98
HMGB1-207ENST00000468384 RSU1Q15404 277 aa2.69□□□□□ -1.98
HMGB1-207ENST00000468384 SPINK9Q5DT21 86 aa2.69□□□□□ -1.98
HMGB1-207ENST00000468384 C1orf195Q5TG92 126 aa2.69□□□□□ -1.98
HMGB1-207ENST00000468384 IDO2Q6ZQW0 420 aa2.69□□□□□ -1.98
HMGB1-207ENST00000468384 RASSF6Q6ZTQ3 369 aa2.69□□□□□ -1.98
HMGB1-207ENST00000468384 NIT1Q86X76 327 aa2.69□□□□□ -1.98
HMGB1-207ENST00000468384 SLC35F6Q8N357 371 aa2.69□□□□□ -1.98
HMGB1-207ENST00000468384 C14orf178Q8N769 122 aaPredicted RBP2.69□□□□□ -1.98
HMGB1-207ENST00000468384 TMEM75Q8N9X5 138 aa2.69□□□□□ -1.98
HMGB1-207ENST00000468384 C20orf203Q8NBC4 194 aa2.69□□□□□ -1.98
HMGB1-207ENST00000468384 OR2D3Q8NGH3 330 aa2.69□□□□□ -1.98
HMGB1-207ENST00000468384 TMEM167AQ8TBQ9 72 aa2.69□□□□□ -1.98
HMGB1-207ENST00000468384 PYDC1Q8WXC3 89 aa2.69□□□□□ -1.98
HMGB1-207ENST00000468384 ASB17Q8WXJ9 295 aa2.69□□□□□ -1.98
HMGB1-207ENST00000468384 SMIM12Q96EX1 92 aa2.69□□□□□ -1.98
HMGB1-207ENST00000468384 BORCS8Q96FH0 119 aa2.69□□□□□ -1.98
HMGB1-207ENST00000468384 TMEM101Q96IK0 257 aa2.69□□□□□ -1.98
HMGB1-207ENST00000468384 ERMAPQ96PL5 475 aaPredicted RBP2.69□□□□□ -1.98
HMGB1-207ENST00000468384 OR52D1Q9H346 318 aa2.69□□□□□ -1.98
HMGB1-207ENST00000468384 BATF3Q9NR55 127 aa2.69□□□□□ -1.98
HMGB1-207ENST00000468384 C14orf166Q9Y224 244 aaKnown RBP2.69□□□□□ -1.98
HMGB1-207ENST00000468384 IGKV2D-24A0A075B6R9 120 aa2.68□□□□□ -1.98
HMGB1-207ENST00000468384 A0A1B0GXF2 115 aa2.68□□□□□ -1.98
HMGB1-207ENST00000468384 NDUFS5O43920 106 aa2.68□□□□□ -1.98
HMGB1-207ENST00000468384 HTN1P15515 57 aa2.68□□□□□ -1.98
HMGB1-207ENST00000468384 MT3P25713 68 aa2.68□□□□□ -1.98
HMGB1-207ENST00000468384 ETV6P41212 452 aa2.68□□□□□ -1.98
HMGB1-207ENST00000468384 HBG1P69891 147 aa2.68□□□□□ -1.98
HMGB1-207ENST00000468384 HBG2P69892 147 aa2.68□□□□□ -1.98
HMGB1-207ENST00000468384 ZNF846Q147U1 533 aa2.68□□□□□ -1.98
HMGB1-207ENST00000468384 TMEM236Q5W0B7 351 aa2.68□□□□□ -1.98
HMGB1-207ENST00000468384 TRIQKQ629K1 86 aa2.68□□□□□ -1.98
HMGB1-207ENST00000468384 TMEM144Q7Z5S9 345 aa2.68□□□□□ -1.98
HMGB1-207ENST00000468384 OR10G9Q8NGN4 311 aa2.68□□□□□ -1.98
HMGB1-207ENST00000468384 OR1P1Q8NH06 330 aa2.68□□□□□ -1.98
HMGB1-207ENST00000468384 LZICQ8WZA0 190 aa2.68□□□□□ -1.98
HMGB1-207ENST00000468384 RMI2Q96E14 147 aa2.68□□□□□ -1.98
HMGB1-207ENST00000468384 FMC1Q96HJ9 113 aa2.68□□□□□ -1.98
HMGB1-207ENST00000468384 OR51E2Q9H255 320 aa2.68□□□□□ -1.98
HMGB1-207ENST00000468384 IGKV1OR2-108A0A075B7D4 117 aa2.67□□□□□ -1.98
HMGB1-207ENST00000468384 PEX7O00628 323 aa2.67□□□□□ -1.98
HMGB1-207ENST00000468384 TCAPO15273 167 aa2.67□□□□□ -1.98
HMGB1-207ENST00000468384 APOA2P02652 100 aa2.67□□□□□ -1.98
HMGB1-207ENST00000468384 CTSGP08311 255 aa2.67□□□□□ -1.98
HMGB1-207ENST00000468384 CD36P16671 472 aa2.67□□□□□ -1.98
HMGB1-207ENST00000468384 ATF1P18846 271 aa2.67□□□□□ -1.98
HMGB1-207ENST00000468384 PSMB9P28065 219 aa2.67□□□□□ -1.98
HMGB1-207ENST00000468384 CRYBA4P53673 196 aa2.67□□□□□ -1.98
HMGB1-207ENST00000468384 TAS2R43P59537 309 aa2.67□□□□□ -1.98
HMGB1-207ENST00000468384 SPCS3P61009 180 aa2.67□□□□□ -1.98
HMGB1-207ENST00000468384 RAB4BP61018 213 aa2.67□□□□□ -1.98
HMGB1-207ENST00000468384 ZNF493Q6ZR52 646 aa2.67□□□□□ -1.98
HMGB1-207ENST00000468384 ZNF485Q8NCK3 441 aa2.67□□□□□ -1.98
HMGB1-207ENST00000468384 OR5H2Q8NGV7 314 aa2.67□□□□□ -1.98
HMGB1-207ENST00000468384 GINS3Q9BRX5 216 aa2.67□□□□□ -1.98
HMGB1-207ENST00000468384 MROQ9BYG7 248 aa2.67□□□□□ -1.98
HMGB1-207ENST00000468384 SLC25A39Q9BZJ4 359 aaPredicted RBP2.67□□□□□ -1.98
HMGB1-207ENST00000468384 PRO0255Q9UI72 69 aa2.67□□□□□ -1.98
HMGB1-207ENST00000468384 V9GYS6 101 aa2.67□□□□□ -1.98
HMGB1-207ENST00000468384 A0A1B0GV72 72 aa2.66□□□□□ -1.98
HMGB1-207ENST00000468384 A0A1B0GVG6 124 aa2.66□□□□□ -1.98
HMGB1-207ENST00000468384 C8orf87E5RJ46 101 aa2.66□□□□□ -1.98
HMGB1-207ENST00000468384 E7EUB6 86 aa2.66□□□□□ -1.98
HMGB1-207ENST00000468384 H3BP45 60 aa2.66□□□□□ -1.98
HMGB1-207ENST00000468384 MYL12BO14950 172 aa2.66□□□□□ -1.98
HMGB1-207ENST00000468384 YPEL1O60688 119 aa2.66□□□□□ -1.98
HMGB1-207ENST00000468384 INSP01308 110 aa2.66□□□□□ -1.98
HMGB1-207ENST00000468384 HMGN1P05114 100 aa2.66□□□□□ -1.98
HMGB1-207ENST00000468384 FABP3P05413 133 aa2.66□□□□□ -1.98
HMGB1-207ENST00000468384 MRPL3P09001 348 aaKnown RBP2.66□□□□□ -1.98
HMGB1-207ENST00000468384 CXCL3P19876 107 aa2.66□□□□□ -1.98
HMGB1-207ENST00000468384 RAB3AP20336 220 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms