RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 M0QZ24 198 aa7.19□□□□□ -1.26
APOBEC1-202ENST00000467171 FRMD6-AS1P0C7T7 363 aa7.19□□□□□ -1.26
APOBEC1-202ENST00000467171 RPL11P62913 178 aaKnown RBP7.19□□□□□ -1.26
APOBEC1-202ENST00000467171 HIST1H1AQ02539 215 aaPredicted RBP7.19□□□□□ -1.26
APOBEC1-202ENST00000467171 ERCC8Q13216 396 aa7.19□□□□□ -1.26
APOBEC1-202ENST00000467171 MRPL54Q6P161 138 aaKnown RBP7.19□□□□□ -1.26
APOBEC1-202ENST00000467171 APRG1Q8IVJ8 170 aa7.19□□□□□ -1.26
APOBEC1-202ENST00000467171 GATD1Q8NB37 220 aa7.19□□□□□ -1.26
APOBEC1-202ENST00000467171 ZNF738Q8NE65 137 aa7.19□□□□□ -1.26
APOBEC1-202ENST00000467171 OR11H1Q8NG94 326 aa7.19□□□□□ -1.26
APOBEC1-202ENST00000467171 OR10J6PQ8NGY7 276 aa7.19□□□□□ -1.26
APOBEC1-202ENST00000467171 LINC01006Q8NI28 216 aa7.19□□□□□ -1.26
APOBEC1-202ENST00000467171 DPF1Q92782 380 aa7.19□□□□□ -1.26
APOBEC1-202ENST00000467171 GPR61Q9BZJ8 451 aa7.19□□□□□ -1.26
APOBEC1-202ENST00000467171 PEMTQ9UBM1 199 aa7.19□□□□□ -1.26
APOBEC1-202ENST00000467171 MXRA5Q9NR99 2828 aa7.19□□□□□ -1.26
APOBEC1-202ENST00000467171 HIVEP2P31629 2446 aa7.18□□□□□ -1.26
APOBEC1-202ENST00000467171 TMEM189A5PLL7 270 aa7.18□□□□□ -1.26
APOBEC1-202ENST00000467171 S100A8P05109 93 aa7.18□□□□□ -1.26
APOBEC1-202ENST00000467171 ZNF80P51504 273 aaPredicted RBP7.18□□□□□ -1.26
APOBEC1-202ENST00000467171 HBBP68871 147 aa7.18□□□□□ -1.26
APOBEC1-202ENST00000467171 FHL3Q13643 280 aa7.18□□□□□ -1.26
APOBEC1-202ENST00000467171 C18orf65Q6ZTR6 163 aa7.18□□□□□ -1.26
APOBEC1-202ENST00000467171 HIST3H2BBQ8N257 126 aa7.18□□□□□ -1.26
APOBEC1-202ENST00000467171 OR8A1Q8NGG7 326 aa7.18□□□□□ -1.26
APOBEC1-202ENST00000467171 PGLYRP4Q96LB8 373 aa7.18□□□□□ -1.26
APOBEC1-202ENST00000467171 FAM19A4Q96LR4 140 aa7.18□□□□□ -1.26
APOBEC1-202ENST00000467171 SMR3AQ99954 134 aa7.18□□□□□ -1.26
APOBEC1-202ENST00000467171 K7EQG2 157 aa7.17□□□□□ -1.26
APOBEC1-202ENST00000467171 SPINK4O60575 86 aa7.17□□□□□ -1.26
APOBEC1-202ENST00000467171 APCSP02743 223 aa7.17□□□□□ -1.26
APOBEC1-202ENST00000467171 CRISP2P16562 243 aa7.17□□□□□ -1.26
APOBEC1-202ENST00000467171 EDN2P20800 178 aa7.17□□□□□ -1.26
APOBEC1-202ENST00000467171 Q0VG73 95 aa7.17□□□□□ -1.26
APOBEC1-202ENST00000467171 RIGQ13278 110 aa7.17□□□□□ -1.26
APOBEC1-202ENST00000467171 GDF5OSQ5U4N7 250 aa7.17□□□□□ -1.26
APOBEC1-202ENST00000467171 ADAMTSL5Q6ZMM2 481 aa7.17□□□□□ -1.26
APOBEC1-202ENST00000467171 KLHL30-AS1Q8NEE0 82 aa7.17□□□□□ -1.26
APOBEC1-202ENST00000467171 OR9G4Q8NGQ1 327 aa7.17□□□□□ -1.26
APOBEC1-202ENST00000467171 ODF3Q96PU9 254 aa7.17□□□□□ -1.26
APOBEC1-202ENST00000467171 MS4A6AQ9H2W1 248 aa7.17□□□□□ -1.26
APOBEC1-202ENST00000467171 TSSC4Q9Y5U2 329 aaPredicted RBP7.17□□□□□ -1.26
APOBEC1-202ENST00000467171 ZFHX3Q15911 3703 aa7.17□□□□□ -1.26
APOBEC1-202ENST00000467171 A0A1B0GUT8 65 aa7.16□□□□□ -1.26
APOBEC1-202ENST00000467171 IFITM10A6NMD0 228 aa7.16□□□□□ -1.26
APOBEC1-202ENST00000467171 IGLC6P0CF74 106 aa7.16□□□□□ -1.26
APOBEC1-202ENST00000467171 GZMBP10144 247 aa7.16□□□□□ -1.26
APOBEC1-202ENST00000467171 PRB4P10163 310 aaPredicted RBP7.16□□□□□ -1.26
APOBEC1-202ENST00000467171 CTRLP40313 264 aa7.16□□□□□ -1.26
APOBEC1-202ENST00000467171 SLURP1P55000 103 aa7.16□□□□□ -1.26
APOBEC1-202ENST00000467171 SNRPD3P62318 126 aaKnown RBP7.16□□□□□ -1.26
APOBEC1-202ENST00000467171 ZNF575Q86XF7 245 aa7.16□□□□□ -1.26
APOBEC1-202ENST00000467171 ZFAND2AQ8N6M9 145 aa7.16□□□□□ -1.26
APOBEC1-202ENST00000467171 CNFNQ9BYD5 112 aa7.16□□□□□ -1.26
APOBEC1-202ENST00000467171 SIGLEC8Q9NYZ4 499 aa7.16□□□□□ -1.26
APOBEC1-202ENST00000467171 CSN3P07498 182 aa7.15□□□□□ -1.26
APOBEC1-202ENST00000467171 CD28P10747 220 aa7.15□□□□□ -1.26
APOBEC1-202ENST00000467171 ESDP10768 282 aa7.15□□□□□ -1.26
APOBEC1-202ENST00000467171 AKR1D1P51857 326 aa7.15□□□□□ -1.26
APOBEC1-202ENST00000467171 PROK1P58294 105 aa7.15□□□□□ -1.26
APOBEC1-202ENST00000467171 RAB4BP61018 213 aa7.15□□□□□ -1.26
APOBEC1-202ENST00000467171 PAFAH1B2P68402 229 aa7.15□□□□□ -1.26
APOBEC1-202ENST00000467171 DEFB136Q30KP8 78 aa7.15□□□□□ -1.26
APOBEC1-202ENST00000467171 OR10J3Q5JRS4 329 aa7.15□□□□□ -1.26
APOBEC1-202ENST00000467171 KHDC1LQ5JSQ8 128 aa7.15□□□□□ -1.26
APOBEC1-202ENST00000467171 ZNF493Q6ZR52 646 aa7.15□□□□□ -1.26
APOBEC1-202ENST00000467171 DLX4Q92988 240 aaPredicted RBP7.15□□□□□ -1.26
APOBEC1-202ENST00000467171 BORCS7Q96B45 105 aa7.15□□□□□ -1.26
APOBEC1-202ENST00000467171 TRAV25A0A0B4J276 109 aa7.14□□□□□ -1.27
APOBEC1-202ENST00000467171 TRAV21A0A0B4J279 112 aa7.14□□□□□ -1.27
APOBEC1-202ENST00000467171 F2Z2F3 143 aa7.14□□□□□ -1.27
APOBEC1-202ENST00000467171 CCL24O00175 119 aa7.14□□□□□ -1.27
APOBEC1-202ENST00000467171 ORM1P02763 201 aa7.14□□□□□ -1.27
APOBEC1-202ENST00000467171 MTORP42345 2549 aa7.14□□□□□ -1.27
APOBEC1-202ENST00000467171 CAMPP49913 170 aa7.14□□□□□ -1.27
APOBEC1-202ENST00000467171 SLAQ13239 276 aa7.14□□□□□ -1.27
APOBEC1-202ENST00000467171 GFI1BQ5VTD9 330 aa7.14□□□□□ -1.27
APOBEC1-202ENST00000467171 LINC00518Q8N0U6 118 aa7.14□□□□□ -1.27
APOBEC1-202ENST00000467171 FER1L6-AS1Q8NA97 138 aa7.14□□□□□ -1.27
APOBEC1-202ENST00000467171 RAX2Q96IS3 184 aa7.14□□□□□ -1.27
APOBEC1-202ENST00000467171 IGKV3-7A0A075B6H7 116 aa7.13□□□□□ -1.27
APOBEC1-202ENST00000467171 IGKV3D-20A0A0C4DH25 116 aa7.13□□□□□ -1.27
APOBEC1-202ENST00000467171 A0A0J9YX75 114 aa7.13□□□□□ -1.27
APOBEC1-202ENST00000467171 A0A1B0GUS0 222 aa7.13□□□□□ -1.27
APOBEC1-202ENST00000467171 KLLNB2CW77 178 aa7.13□□□□□ -1.27
APOBEC1-202ENST00000467171 TCF21O43680 179 aa7.13□□□□□ -1.27
APOBEC1-202ENST00000467171 DUSP14O95147 198 aaKnown RBP7.13□□□□□ -1.27
APOBEC1-202ENST00000467171 ARMS2P0C7Q2 107 aa7.13□□□□□ -1.27
APOBEC1-202ENST00000467171 SMIM6P0DI80 62 aa7.13□□□□□ -1.27
APOBEC1-202ENST00000467171 S100A2P29034 98 aa7.13□□□□□ -1.27
APOBEC1-202ENST00000467171 DEFB114Q30KQ6 69 aa7.13□□□□□ -1.27
APOBEC1-202ENST00000467171 LYZL1Q6UWQ5 148 aa7.13□□□□□ -1.27
APOBEC1-202ENST00000467171 FOXI2Q6ZQN5 318 aa7.13□□□□□ -1.27
APOBEC1-202ENST00000467171 WFDC3Q8IUB2 231 aa7.13□□□□□ -1.27
APOBEC1-202ENST00000467171 PACRGQ96M98 296 aaPredicted RBP7.13□□□□□ -1.27
APOBEC1-202ENST00000467171 HIST1H2BLQ99880 126 aa7.13□□□□□ -1.27
APOBEC1-202ENST00000467171 CITED2Q99967 270 aaPredicted RBP7.13□□□□□ -1.27
APOBEC1-202ENST00000467171 ALKBH7Q9BT30 221 aaPredicted RBP7.13□□□□□ -1.27
APOBEC1-202ENST00000467171 C11orf21Q9P2W6 132 aa7.13□□□□□ -1.27
APOBEC1-202ENST00000467171 TP53TG3Q9ULZ0 132 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms