RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 BANF2Q9H503 90 aa1.13□□□□□ -2.23
VPS13A-209ENST00000467124 ERBINQ96RT1 1412 aa1.13□□□□□ -2.23
VPS13A-209ENST00000467124 A0A1B0GX51 115 aa1.12□□□□□ -2.23
VPS13A-209ENST00000467124 IGHV3-33P01772 117 aa1.12□□□□□ -2.23
VPS13A-209ENST00000467124 IL7P13232 177 aa1.12□□□□□ -2.23
VPS13A-209ENST00000467124 CKS2P33552 79 aa1.12□□□□□ -2.23
VPS13A-209ENST00000467124 CCDC153Q494R4 210 aa1.12□□□□□ -2.23
VPS13A-209ENST00000467124 Q86TA4 180 aa1.12□□□□□ -2.23
VPS13A-209ENST00000467124 TCTE3Q8IZS6 198 aa1.12□□□□□ -2.23
VPS13A-209ENST00000467124 Q8N6K4 173 aa1.12□□□□□ -2.23
VPS13A-209ENST00000467124 OR10AC1Q8NH08 325 aa1.12□□□□□ -2.23
VPS13A-209ENST00000467124 ANP32BQ92688 251 aaKnown RBP1.12□□□□□ -2.23
VPS13A-209ENST00000467124 MED23Q9ULK4 1368 aa1.11□□□□□ -2.23
VPS13A-209ENST00000467124 TMEM189A5PLL7 270 aa1.11□□□□□ -2.23
VPS13A-209ENST00000467124 UQCRQO14949 82 aa1.11□□□□□ -2.23
VPS13A-209ENST00000467124 RPL37AP61513 92 aaKnown RBP1.11□□□□□ -2.23
VPS13A-209ENST00000467124 SNRPD3P62318 126 aaKnown RBP1.11□□□□□ -2.23
VPS13A-209ENST00000467124 QRFPP83859 136 aa1.11□□□□□ -2.23
VPS13A-209ENST00000467124 IQCJQ1A5X6 159 aa1.11□□□□□ -2.23
VPS13A-209ENST00000467124 C3orf62Q6ZUJ4 267 aa1.11□□□□□ -2.23
VPS13A-209ENST00000467124 GSKIPQ9P0R6 139 aa1.11□□□□□ -2.23
VPS13A-209ENST00000467124 COMMD3Q9UBI1 195 aa1.11□□□□□ -2.23
VPS13A-209ENST00000467124 BOKQ9UMX3 212 aaPredicted RBP1.11□□□□□ -2.23
VPS13A-209ENST00000467124 MPC1Q9Y5U8 109 aa1.11□□□□□ -2.23
VPS13A-209ENST00000467124 ASCC3Q8N3C0 2202 aaKnown RBP1.11□□□□□ -2.23
VPS13A-209ENST00000467124 PEAK1Q9H792 1746 aa1.1□□□□□ -2.23
VPS13A-209ENST00000467124 IGHV1-24A0A0C4DH33 117 aa1.1□□□□□ -2.23
VPS13A-209ENST00000467124 SULT1C4O75897 302 aa1.1□□□□□ -2.23
VPS13A-209ENST00000467124 OR2H2O95918 312 aa1.1□□□□□ -2.23
VPS13A-209ENST00000467124 IGKCP01834 107 aa1.1□□□□□ -2.23
VPS13A-209ENST00000467124 SCGB1A1P11684 91 aa1.1□□□□□ -2.23
VPS13A-209ENST00000467124 ETV6P41212 452 aa1.1□□□□□ -2.23
VPS13A-209ENST00000467124 SMIM7Q9BQ49 75 aa1.1□□□□□ -2.23
VPS13A-209ENST00000467124 XIRP1Q702N8 1843 aaKnown RBP1.1□□□□□ -2.23
VPS13A-209ENST00000467124 ARHGEF10O15013 1369 aa1.09□□□□□ -2.23
VPS13A-209ENST00000467124 A0A1W2PPB8 328 aa1.09□□□□□ -2.23
VPS13A-209ENST00000467124 A0A1W2PRS3 328 aa1.09□□□□□ -2.23
VPS13A-209ENST00000467124 KIR3DP1A8MWS1 328 aa1.09□□□□□ -2.23
VPS13A-209ENST00000467124 TFF1P04155 84 aa1.09□□□□□ -2.23
VPS13A-209ENST00000467124 LSM3P62310 102 aaKnown RBP1.09□□□□□ -2.23
VPS13A-209ENST00000467124 LINC00299Q6ZSB3 139 aa1.09□□□□□ -2.23
VPS13A-209ENST00000467124 TCTEX1D1Q8N7M0 179 aa1.09□□□□□ -2.23
VPS13A-209ENST00000467124 LZICQ8WZA0 190 aa1.09□□□□□ -2.23
VPS13A-209ENST00000467124 MUC4Q99102 2169 aa1.08□□□□□ -2.24
VPS13A-209ENST00000467124 FANCMQ8IYD8 2048 aa1.08□□□□□ -2.24
VPS13A-209ENST00000467124 ZNF727A8MUV8 499 aa1.08□□□□□ -2.24
VPS13A-209ENST00000467124 CCL4P13236 92 aa1.08□□□□□ -2.24
VPS13A-209ENST00000467124 CKS1BP61024 79 aa1.08□□□□□ -2.24
VPS13A-209ENST00000467124 PRB3Q04118 309 aaPredicted RBP1.08□□□□□ -2.24
VPS13A-209ENST00000467124 ZGRF1Q86YA3 2104 aa1.08□□□□□ -2.24
VPS13A-209ENST00000467124 OR8J3Q8NGG0 315 aa1.08□□□□□ -2.24
VPS13A-209ENST00000467124 HSPB8Q9UJY1 196 aa1.08□□□□□ -2.24
VPS13A-209ENST00000467124 USP54Q70EL1 1684 aa1.07□□□□□ -2.24
VPS13A-209ENST00000467124 TENM1Q9UKZ4 2725 aa1.07□□□□□ -2.24
VPS13A-209ENST00000467124 A0A0J9YY99 117 aa1.07□□□□□ -2.24
VPS13A-209ENST00000467124 SMIM24O75264 130 aa1.07□□□□□ -2.24
VPS13A-209ENST00000467124 CD3DP04234 171 aa1.07□□□□□ -2.24
VPS13A-209ENST00000467124 PDE6GP18545 87 aa1.07□□□□□ -2.24
VPS13A-209ENST00000467124 DNAJB13P59910 316 aa1.07□□□□□ -2.24
VPS13A-209ENST00000467124 ALX1Q15699 326 aa1.07□□□□□ -2.24
VPS13A-209ENST00000467124 IZUMO2Q6UXV1 221 aa1.07□□□□□ -2.24
VPS13A-209ENST00000467124 C10orf111Q8N326 155 aa1.07□□□□□ -2.24
VPS13A-209ENST00000467124 MAFIPQ8WZ33 124 aa1.07□□□□□ -2.24
VPS13A-209ENST00000467124 PTPRDP23468 1912 aa1.07□□□□□ -2.24
VPS13A-209ENST00000467124 CITO14578 2027 aa1.06□□□□□ -2.24
VPS13A-209ENST00000467124 BORCS7-ASMTA0A0B4J1R7 106 aa1.06□□□□□ -2.24
VPS13A-209ENST00000467124 TRAV17A0A0B4J275 112 aa1.06□□□□□ -2.24
VPS13A-209ENST00000467124 IFITM5A6NNB3 132 aa1.06□□□□□ -2.24
VPS13A-209ENST00000467124 SCTP09683 121 aa1.06□□□□□ -2.24
VPS13A-209ENST00000467124 HIST1H1BP16401 226 aaKnown RBP1.06□□□□□ -2.24
VPS13A-209ENST00000467124 SMIM3Q9BZL3 60 aa1.06□□□□□ -2.24
VPS13A-209ENST00000467124 SPANXA1Q9NS26 97 aa1.06□□□□□ -2.24
VPS13A-209ENST00000467124 MRPL36Q9P0J6 103 aaKnown RBP1.06□□□□□ -2.24
VPS13A-209ENST00000467124 ARAP1Q96P48 1450 aa1.05□□□□□ -2.24
VPS13A-209ENST00000467124 CNTRLQ7Z7A1 2325 aa1.05□□□□□ -2.24
VPS13A-209ENST00000467124 SYNJ1O43426 1573 aa1.05□□□□□ -2.24
VPS13A-209ENST00000467124 KDM5CP41229 1560 aa1.05□□□□□ -2.24
VPS13A-209ENST00000467124 TMEM30CPA0ZSE6 113 aa1.05□□□□□ -2.24
VPS13A-209ENST00000467124 M0R129 80 aa1.05□□□□□ -2.24
VPS13A-209ENST00000467124 DBIP07108 87 aaKnown RBP1.05□□□□□ -2.24
VPS13A-209ENST00000467124 HIST1H1AQ02539 215 aaPredicted RBP1.05□□□□□ -2.24
VPS13A-209ENST00000467124 CLLU1Q5K131 121 aa1.05□□□□□ -2.24
VPS13A-209ENST00000467124 TMEM91Q6ZNR0 172 aa1.05□□□□□ -2.24
VPS13A-209ENST00000467124 IDO2Q6ZQW0 420 aa1.05□□□□□ -2.24
VPS13A-209ENST00000467124 KRTAP4-1Q9BYQ7 146 aa1.05□□□□□ -2.24
VPS13A-209ENST00000467124 METTL1Q9UBP6 276 aaKnown RBP1.05□□□□□ -2.24
VPS13A-209ENST00000467124 DNAJC15Q9Y5T4 150 aa1.05□□□□□ -2.24
VPS13A-209ENST00000467124 TRBV30A0A0K0K1B3 111 aa1.04□□□□□ -2.24
VPS13A-209ENST00000467124 LOC101927531A0A1B0GV80 90 aa1.04□□□□□ -2.24
VPS13A-209ENST00000467124 A6NN06 94 aa1.04□□□□□ -2.24
VPS13A-209ENST00000467124 KDELR1P24390 212 aa1.04□□□□□ -2.24
VPS13A-209ENST00000467124 LYPD5Q6UWN5 251 aa1.04□□□□□ -2.24
VPS13A-209ENST00000467124 Q6ZQY7 126 aa1.04□□□□□ -2.24
VPS13A-209ENST00000467124 CCL19Q99731 98 aa1.04□□□□□ -2.24
VPS13A-209ENST00000467124 SLC35B3Q9H1N7 401 aa1.04□□□□□ -2.24
VPS13A-209ENST00000467124 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.03□□□□□ -2.24
VPS13A-209ENST00000467124 ANK1P16157 1881 aa1.03□□□□□ -2.24
VPS13A-209ENST00000467124 TRPM7Q96QT4 1865 aa1.03□□□□□ -2.24
VPS13A-209ENST00000467124 HLA-DRB4P13762 266 aa1.03□□□□□ -2.24
VPS13A-209ENST00000467124 ADCYAP1P18509 176 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms