RNA–Protein interactions for RNA: ENST00000466892.5

HLA-C-205, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-205ENST00000466892 PRNTQ86SH4 94 aa11.87□□□□□ -0.51
HLA-C-205ENST00000466892 LINC00479Q96M42 142 aa11.87□□□□□ -0.51
HLA-C-205ENST00000466892 LINC00467Q9BRT7 94 aa11.87□□□□□ -0.51
HLA-C-205ENST00000466892 TMEM208Q9BTX3 173 aa11.87□□□□□ -0.51
HLA-C-205ENST00000466892 MED9Q9NWA0 146 aa11.87□□□□□ -0.51
HLA-C-205ENST00000466892 TRAV34A0A0B4J273 112 aa11.86□□□□□ -0.51
HLA-C-205ENST00000466892 MIFP14174 115 aa11.86□□□□□ -0.51
HLA-C-205ENST00000466892 RPL35P42766 123 aaKnown RBP11.86□□□□□ -0.51
HLA-C-205ENST00000466892 PEA15Q15121 130 aa11.86□□□□□ -0.51
HLA-C-205ENST00000466892 SMUG1Q53HV7 270 aa11.86□□□□□ -0.51
HLA-C-205ENST00000466892 C1orf158Q8N1D5 194 aa11.86□□□□□ -0.51
HLA-C-205ENST00000466892 OR11H2Q8NH07 326 aa11.86□□□□□ -0.51
HLA-C-205ENST00000466892 PCNPQ8WW12 178 aaKnown RBP11.86□□□□□ -0.51
HLA-C-205ENST00000466892 TVP23CQ96ET8 276 aa11.86□□□□□ -0.51
HLA-C-205ENST00000466892 PYGO2Q9BRQ0 406 aa11.86□□□□□ -0.51
HLA-C-205ENST00000466892 RAB19A4D1S5 217 aa11.85□□□□□ -0.51
HLA-C-205ENST00000466892 ZNF324O75467 553 aaPredicted RBP11.85□□□□□ -0.51
HLA-C-205ENST00000466892 RNASE4P34096 147 aaKnown RBP11.85□□□□□ -0.51
HLA-C-205ENST00000466892 TMEM183AQ8IXX5 376 aa11.85□□□□□ -0.51
HLA-C-205ENST00000466892 SGK494Q96LW2 274 aa11.85□□□□□ -0.51
HLA-C-205ENST00000466892 TRAV21A0A0B4J279 112 aa11.84□□□□□ -0.51
HLA-C-205ENST00000466892 PFN1P07737 140 aaKnown RBP11.84□□□□□ -0.51
HLA-C-205ENST00000466892 X6R8D5 127 aa11.84□□□□□ -0.51
HLA-C-205ENST00000466892 TRAV12-3A0A0B4J271 114 aa11.83□□□□□ -0.52
HLA-C-205ENST00000466892 TMEM189A5PLL7 270 aa11.83□□□□□ -0.52
HLA-C-205ENST00000466892 C9JCJ5 164 aa11.83□□□□□ -0.52
HLA-C-205ENST00000466892 RBMY1A1P0DJD3 496 aaKnown RBP11.83□□□□□ -0.52
HLA-C-205ENST00000466892 RBMY1CP0DJD4 496 aa11.83□□□□□ -0.52
HLA-C-205ENST00000466892 BTN1A1Q13410 526 aa11.83□□□□□ -0.52
HLA-C-205ENST00000466892 KIR3DS1Q14943 382 aa11.83□□□□□ -0.52
HLA-C-205ENST00000466892 RBMY1FQ15415 496 aaKnown RBP11.83□□□□□ -0.52
HLA-C-205ENST00000466892 ZNF493Q6ZR52 646 aa11.83□□□□□ -0.52
HLA-C-205ENST00000466892 BAGE2Q86Y30 109 aa11.83□□□□□ -0.52
HLA-C-205ENST00000466892 LINC01587Q99440 93 aa11.83□□□□□ -0.52
HLA-C-205ENST00000466892 MLST8Q9BVC4 326 aa11.83□□□□□ -0.52
HLA-C-205ENST00000466892 C11orf68Q9H3H3 251 aaKnown RBP11.83□□□□□ -0.52
HLA-C-205ENST00000466892 RETNQ9HD89 108 aa11.83□□□□□ -0.52
HLA-C-205ENST00000466892 U3KQK5 164 aa11.83□□□□□ -0.52
HLA-C-205ENST00000466892 J3KRW8 73 aa11.82□□□□□ -0.52
HLA-C-205ENST00000466892 GCGP01275 180 aa11.82□□□□□ -0.52
HLA-C-205ENST00000466892 GNG4P50150 75 aa11.82□□□□□ -0.52
HLA-C-205ENST00000466892 RRN3P1Q2M238 152 aa11.82□□□□□ -0.52
HLA-C-205ENST00000466892 TDRG1Q3Y452 100 aa11.82□□□□□ -0.52
HLA-C-205ENST00000466892 PRR9Q5T870 116 aa11.82□□□□□ -0.52
HLA-C-205ENST00000466892 BIN3Q9NQY0 253 aa11.82□□□□□ -0.52
HLA-C-205ENST00000466892 IGHV3OR16-12A0A075B7B8 117 aa11.81□□□□□ -0.52
HLA-C-205ENST00000466892 SRP19P09132 144 aaKnown RBP11.81□□□□□ -0.52
HLA-C-205ENST00000466892 ANXA2RQ3ZCQ2 193 aa11.81□□□□□ -0.52
HLA-C-205ENST00000466892 FAM74A3Q4VXF1 159 aa11.81□□□□□ -0.52
HLA-C-205ENST00000466892 CENPWQ5EE01 88 aa11.81□□□□□ -0.52
HLA-C-205ENST00000466892 C8orf49Q96NF6 230 aa11.81□□□□□ -0.52
HLA-C-205ENST00000466892 DERL1Q9BUN8 251 aa11.81□□□□□ -0.52
HLA-C-205ENST00000466892 PARLQ9H300 379 aa11.81□□□□□ -0.52
HLA-C-205ENST00000466892 IGHV1OR15-1A0A075B7D0 117 aa11.8□□□□□ -0.52
HLA-C-205ENST00000466892 FABP5P3A8MUU1 101 aa11.8□□□□□ -0.52
HLA-C-205ENST00000466892 ZNF674Q2M3X9 581 aa11.8□□□□□ -0.52
HLA-C-205ENST00000466892 FAM162BQ5T6X4 162 aa11.8□□□□□ -0.52
HLA-C-205ENST00000466892 UQCC3Q6UW78 93 aa11.8□□□□□ -0.52
HLA-C-205ENST00000466892 FAM159AQ6UWV7 190 aa11.8□□□□□ -0.52
HLA-C-205ENST00000466892 EIF4E3Q8N5X7 224 aaKnown RBP11.8□□□□□ -0.52
HLA-C-205ENST00000466892 Q8NAQ8 132 aa11.8□□□□□ -0.52
HLA-C-205ENST00000466892 C16orf74Q96GX8 76 aa11.8□□□□□ -0.52
HLA-C-205ENST00000466892 ZC2HC1AQ96GY0 325 aa11.8□□□□□ -0.52
HLA-C-205ENST00000466892 KCNS1Q96KK3 526 aa11.8□□□□□ -0.52
HLA-C-205ENST00000466892 LY96Q9Y6Y9 160 aa11.8□□□□□ -0.52
HLA-C-205ENST00000466892 AGRNO00468 2067 aa11.8□□□□□ -0.52
HLA-C-205ENST00000466892 TEX48A0A1B0GUV7 120 aa11.79□□□□□ -0.52
HLA-C-205ENST00000466892 TMEM263Q8WUH6 116 aaKnown RBP11.79□□□□□ -0.52
HLA-C-205ENST00000466892 TRBV20OR9-2A0A075B6H5 130 aa11.78□□□□□ -0.52
HLA-C-205ENST00000466892 IGHV4-28A0A0C4DH34 117 aa11.78□□□□□ -0.52
HLA-C-205ENST00000466892 ZNF80P51504 273 aaPredicted RBP11.78□□□□□ -0.52
HLA-C-205ENST00000466892 IBA57Q5T440 356 aaKnown RBP11.78□□□□□ -0.52
HLA-C-205ENST00000466892 RNASE8Q8TDE3 154 aaKnown RBP11.78□□□□□ -0.52
HLA-C-205ENST00000466892 PRKDCP78527 4128 aaKnown RBP11.77□□□□□ -0.53
HLA-C-205ENST00000466892 TRGV11A0A075B6L2 103 aa11.77□□□□□ -0.53
HLA-C-205ENST00000466892 SMIM7Q9BQ49 75 aa11.77□□□□□ -0.53
HLA-C-205ENST00000466892 TP53TG3Q9ULZ0 132 aa11.77□□□□□ -0.53
HLA-C-205ENST00000466892 LINC00862A6NCI5 91 aa11.76□□□□□ -0.53
HLA-C-205ENST00000466892 CBY3A6NI87 242 aa11.76□□□□□ -0.53
HLA-C-205ENST00000466892 ZNF727A8MUV8 499 aa11.76□□□□□ -0.53
HLA-C-205ENST00000466892 IGLV2-8P01709 118 aa11.76□□□□□ -0.53
HLA-C-205ENST00000466892 SRSF3P84103 164 aaKnown RBP11.76□□□□□ -0.53
HLA-C-205ENST00000466892 SDF2L1Q9HCN8 221 aa11.76□□□□□ -0.53
HLA-C-205ENST00000466892 ZNF705GA8MUZ8 300 aaPredicted RBP11.75□□□□□ -0.53
HLA-C-205ENST00000466892 C9JQL5 133 aa11.75□□□□□ -0.53
HLA-C-205ENST00000466892 CRIP1P50238 77 aa11.75□□□□□ -0.53
HLA-C-205ENST00000466892 CEBPGP53567 150 aa11.75□□□□□ -0.53
HLA-C-205ENST00000466892 LINC01559Q495D7 138 aa11.75□□□□□ -0.53
HLA-C-205ENST00000466892 SOHLH1Q5JUK2 328 aa11.75□□□□□ -0.53
HLA-C-205ENST00000466892 NHLRC2Q8NBF2 726 aa11.75□□□□□ -0.53
HLA-C-205ENST00000466892 SH2D1AO60880 128 aa11.74□□□□□ -0.53
HLA-C-205ENST00000466892 HTN1P15515 57 aa11.74□□□□□ -0.53
HLA-C-205ENST00000466892 EDA2RQ9HAV5 297 aa11.74□□□□□ -0.53
HLA-C-205ENST00000466892 NBEAL2Q6ZNJ1 2754 aa11.74□□□□□ -0.53
HLA-C-205ENST00000466892 A0A0J9YWU9 116 aa11.73□□□□□ -0.53
HLA-C-205ENST00000466892 PLAC8L1A1L4L8 177 aa11.73□□□□□ -0.53
HLA-C-205ENST00000466892 LYRM9A8MSI8 78 aa11.73□□□□□ -0.53
HLA-C-205ENST00000466892 SNURFLB1AK76 121 aa11.73□□□□□ -0.53
HLA-C-205ENST00000466892 CXCL1P09341 107 aa11.73□□□□□ -0.53
HLA-C-205ENST00000466892 MGST1P10620 155 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms