RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 OTOSQ8NHW6 89 aa0.69□□□□□ -2.3
GTF3C3-209ENST00000466862 LINC00526Q96FQ7 95 aa0.69□□□□□ -2.3
GTF3C3-209ENST00000466862 PFDN5Q99471 154 aa0.69□□□□□ -2.3
GTF3C3-209ENST00000466862 TSC22D3Q99576 134 aa0.69□□□□□ -2.3
GTF3C3-209ENST00000466862 MRPL57Q9BQC6 102 aaKnown RBP0.69□□□□□ -2.3
GTF3C3-209ENST00000466862 COMMD3Q9UBI1 195 aa0.69□□□□□ -2.3
GTF3C3-209ENST00000466862 OVOS2A0A0J9YW53 1432 aa0.69□□□□□ -2.3
GTF3C3-209ENST00000466862 SOGA1O94964 1423 aa0.69□□□□□ -2.3
GTF3C3-209ENST00000466862 OVOS2Q6IE36 1432 aa0.69□□□□□ -2.3
GTF3C3-209ENST00000466862 FGD6Q6ZV73 1430 aa0.69□□□□□ -2.3
GTF3C3-209ENST00000466862 FREM3P0C091 2139 aa0.68□□□□□ -2.3
GTF3C3-209ENST00000466862 POLEQ07864 2286 aa0.68□□□□□ -2.3
GTF3C3-209ENST00000466862 IGLV3-32A0A0A0MS00 114 aa0.68□□□□□ -2.3
GTF3C3-209ENST00000466862 FAM236AA0A1B0GUQ0 79 aa0.68□□□□□ -2.3
GTF3C3-209ENST00000466862 FAM236BA0A1B0GV22 79 aa0.68□□□□□ -2.3
GTF3C3-209ENST00000466862 M0R129 80 aa0.68□□□□□ -2.3
GTF3C3-209ENST00000466862 M0R2Z0 102 aa0.68□□□□□ -2.3
GTF3C3-209ENST00000466862 KLF7O75840 302 aaPredicted RBP0.68□□□□□ -2.3
GTF3C3-209ENST00000466862 IGHV3-33P01772 117 aa0.68□□□□□ -2.3
GTF3C3-209ENST00000466862 IGLC6P0CF74 106 aa0.68□□□□□ -2.3
GTF3C3-209ENST00000466862 LINC00694P0DN24 101 aa0.68□□□□□ -2.3
GTF3C3-209ENST00000466862 LYNX1P0DP58 116 aa0.68□□□□□ -2.3
GTF3C3-209ENST00000466862 HLA-DRB4P13762 266 aa0.68□□□□□ -2.3
GTF3C3-209ENST00000466862 EVI2AP22794 236 aa0.68□□□□□ -2.3
GTF3C3-209ENST00000466862 KDELR1P24390 212 aa0.68□□□□□ -2.3
GTF3C3-209ENST00000466862 CKS2P33552 79 aa0.68□□□□□ -2.3
GTF3C3-209ENST00000466862 DNAJB13P59910 316 aa0.68□□□□□ -2.3
GTF3C3-209ENST00000466862 CLLU1Q5K131 121 aa0.68□□□□□ -2.3
GTF3C3-209ENST00000466862 LINC00322Q6ZN03 302 aaPredicted RBP0.68□□□□□ -2.3
GTF3C3-209ENST00000466862 Q6ZSA8 131 aa0.68□□□□□ -2.3
GTF3C3-209ENST00000466862 C10orf111Q8N326 155 aa0.68□□□□□ -2.3
GTF3C3-209ENST00000466862 C5orf17Q8NAS9 161 aa0.68□□□□□ -2.3
GTF3C3-209ENST00000466862 PRG4Q92954 1404 aaPredicted RBP0.68□□□□□ -2.3
GTF3C3-209ENST00000466862 MAGOHBQ96A72 148 aaKnown RBP0.68□□□□□ -2.3
GTF3C3-209ENST00000466862 OBSCN-AS1Q96MR7 158 aa0.68□□□□□ -2.3
GTF3C3-209ENST00000466862 CIB3Q96Q77 187 aaPredicted RBP0.68□□□□□ -2.3
GTF3C3-209ENST00000466862 VPS25Q9BRG1 176 aa0.68□□□□□ -2.3
GTF3C3-209ENST00000466862 LIMD2Q9BT23 127 aa0.68□□□□□ -2.3
GTF3C3-209ENST00000466862 SLC35B3Q9H1N7 401 aa0.68□□□□□ -2.3
GTF3C3-209ENST00000466862 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.68□□□□□ -2.3
GTF3C3-209ENST00000466862 METTL1Q9UBP6 276 aaKnown RBP0.68□□□□□ -2.3
GTF3C3-209ENST00000466862 DNAJC15Q9Y5T4 150 aa0.68□□□□□ -2.3
GTF3C3-209ENST00000466862 MPC1Q9Y5U8 109 aa0.68□□□□□ -2.3
GTF3C3-209ENST00000466862 HLA-DRB4X5D2U9 266 aa0.68□□□□□ -2.3
GTF3C3-209ENST00000466862 VIRMAQ69YN4 1812 aaKnown RBP0.68□□□□□ -2.3
GTF3C3-209ENST00000466862 TNRC6BQ9UPQ9 1833 aaKnown RBP0.68□□□□□ -2.3
GTF3C3-209ENST00000466862 WDR97A6NE52 1622 aa0.67□□□□□ -2.3
GTF3C3-209ENST00000466862 CCDC171Q6TFL3 1326 aa0.67□□□□□ -2.3
GTF3C3-209ENST00000466862 ADGRB2O60241 1585 aa0.67□□□□□ -2.3
GTF3C3-209ENST00000466862 DISP2A7MBM2 1401 aa0.67□□□□□ -2.3
GTF3C3-209ENST00000466862 ERBINQ96RT1 1412 aa0.67□□□□□ -2.3
GTF3C3-209ENST00000466862 IGHV1-24A0A0C4DH33 117 aa0.67□□□□□ -2.3
GTF3C3-209ENST00000466862 A6NN06 94 aa0.67□□□□□ -2.3
GTF3C3-209ENST00000466862 BBIP1A8MTZ0 92 aa0.67□□□□□ -2.3
GTF3C3-209ENST00000466862 J3QR89 54 aa0.67□□□□□ -2.3
GTF3C3-209ENST00000466862 K7ERU9 68 aa0.67□□□□□ -2.3
GTF3C3-209ENST00000466862 CDC42EP2O14613 210 aa0.67□□□□□ -2.3
GTF3C3-209ENST00000466862 PPYP01298 95 aa0.67□□□□□ -2.3
GTF3C3-209ENST00000466862 ANGP03950 147 aaKnown RBP0.67□□□□□ -2.3
GTF3C3-209ENST00000466862 TSPAN19P0C672 248 aa0.67□□□□□ -2.3
GTF3C3-209ENST00000466862 CTAGE3PQ8IX95 158 aa0.67□□□□□ -2.3
GTF3C3-209ENST00000466862 MMGT1Q8N4V1 131 aa0.67□□□□□ -2.3
GTF3C3-209ENST00000466862 ODF3Q96PU9 254 aa0.67□□□□□ -2.3
GTF3C3-209ENST00000466862 SMIM7Q9BQ49 75 aa0.67□□□□□ -2.3
GTF3C3-209ENST00000466862 LPAR5Q9H1C0 372 aa0.67□□□□□ -2.3
GTF3C3-209ENST00000466862 WFDC10AQ9H1F0 79 aa0.67□□□□□ -2.3
GTF3C3-209ENST00000466862 TPT1P8Q9HAU6 139 aa0.67□□□□□ -2.3
GTF3C3-209ENST00000466862 LSM2Q9Y333 95 aaKnown RBP0.67□□□□□ -2.3
GTF3C3-209ENST00000466862 ZFC3H1O60293 1989 aaKnown RBP0.66□□□□□ -2.3
GTF3C3-209ENST00000466862 MCM3APO60318 1980 aa0.66□□□□□ -2.3
GTF3C3-209ENST00000466862 KIAA1549Q9HCM3 1950 aa0.66□□□□□ -2.3
GTF3C3-209ENST00000466862 MUC5BQ9HC84 5762 aaPredicted RBP0.66□□□□□ -2.3
GTF3C3-209ENST00000466862 SIP14410 1827 aa0.66□□□□□ -2.3
GTF3C3-209ENST00000466862 MED13Q9UHV7 2174 aa0.66□□□□□ -2.3
GTF3C3-209ENST00000466862 ALPK3Q96L96 1907 aa0.66□□□□□ -2.3
GTF3C3-209ENST00000466862 TRAV23DV6A0A075B6W5 121 aa0.66□□□□□ -2.3
GTF3C3-209ENST00000466862 PNMA8CA0A1B0GUJ8 204 aa0.66□□□□□ -2.3
GTF3C3-209ENST00000466862 IFITM5A6NNB3 132 aa0.66□□□□□ -2.3
GTF3C3-209ENST00000466862 JMJD7-PLA2G4BH0Y9G9 81 aa0.66□□□□□ -2.3
GTF3C3-209ENST00000466862 NPFFO15130 113 aa0.66□□□□□ -2.3
GTF3C3-209ENST00000466862 SULT1C4O75897 302 aa0.66□□□□□ -2.3
GTF3C3-209ENST00000466862 ADCYAP1P18509 176 aa0.66□□□□□ -2.3
GTF3C3-209ENST00000466862 NCS1P62166 190 aa0.66□□□□□ -2.3
GTF3C3-209ENST00000466862 RPS25P62851 125 aaKnown RBP0.66□□□□□ -2.3
GTF3C3-209ENST00000466862 PLGLB1Q02325 96 aa0.66□□□□□ -2.3
GTF3C3-209ENST00000466862 ASB16-AS1Q495Z4 193 aa0.66□□□□□ -2.3
GTF3C3-209ENST00000466862 CCSMST1Q4G0I0 132 aa0.66□□□□□ -2.3
GTF3C3-209ENST00000466862 SPATA45Q537H7 98 aa0.66□□□□□ -2.3
GTF3C3-209ENST00000466862 IZUMO2Q6UXV1 221 aa0.66□□□□□ -2.3
GTF3C3-209ENST00000466862 LINC00299Q6ZSB3 139 aa0.66□□□□□ -2.3
GTF3C3-209ENST00000466862 C3orf62Q6ZUJ4 267 aa0.66□□□□□ -2.3
GTF3C3-209ENST00000466862 TCTEX1D1Q8N7M0 179 aa0.66□□□□□ -2.3
GTF3C3-209ENST00000466862 OR10AC1Q8NH08 325 aa0.66□□□□□ -2.3
GTF3C3-209ENST00000466862 ERG28Q9UKR5 140 aa0.66□□□□□ -2.3
GTF3C3-209ENST00000466862 PHRF1Q9P1Y6 1649 aaKnown RBP0.66□□□□□ -2.3
GTF3C3-209ENST00000466862 KIAA1549LQ6ZVL6 1849 aa0.66□□□□□ -2.3
GTF3C3-209ENST00000466862 HEATR1Q9H583 2144 aaKnown RBP0.65□□□□□ -2.3
GTF3C3-209ENST00000466862 AHNAKQ09666 5890 aaKnown RBP0.65□□□□□ -2.3
GTF3C3-209ENST00000466862 EXPH5Q8NEV8 1989 aa0.65□□□□□ -2.31
GTF3C3-209ENST00000466862 TANC2Q9HCD6 1990 aa0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms