RNA–Protein interactions for RNA: ENST00000466410.5

LIMS2-212, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-212ENST00000466410 TMEM97Q5BJF2 176 aa14.85□□□□□ -0.03
LIMS2-212ENST00000466410 SPTAN1Q13813 2472 aaKnown RBP14.85□□□□□ -0.03
LIMS2-212ENST00000466410 SFTPCP11686 197 aa14.84□□□□□ -0.03
LIMS2-212ENST00000466410 TMEM78Q5T7P6 136 aa14.84□□□□□ -0.03
LIMS2-212ENST00000466410 BOD1L2Q8IYS8 172 aa14.84□□□□□ -0.03
LIMS2-212ENST00000466410 ABCA2Q9BZC7 2435 aa14.84□□□□□ -0.03
LIMS2-212ENST00000466410 TRGV3P03979 118 aa14.84□□□□□ -0.03
LIMS2-212ENST00000466410 LEPP41159 167 aa14.84□□□□□ -0.03
LIMS2-212ENST00000466410 U3KQE9 123 aa14.84□□□□□ -0.03
LIMS2-212ENST00000466410 LINC01546A6NGU7 62 aa14.83□□□□□ -0.03
LIMS2-212ENST00000466410 ATP5G2Q06055 141 aa14.83□□□□□ -0.03
LIMS2-212ENST00000466410 AMMECR1LQ6DCA0 310 aa14.83□□□□□ -0.03
LIMS2-212ENST00000466410 NPFFR1Q9GZQ6 430 aa14.83□□□□□ -0.03
LIMS2-212ENST00000466410 C19orf84I3L1E1 186 aa14.83□□□□□ -0.04
LIMS2-212ENST00000466410 K7EP13 123 aa14.82□□□□□ -0.04
LIMS2-212ENST00000466410 CBY1Q9Y3M2 126 aa14.82□□□□□ -0.04
LIMS2-212ENST00000466410 CFAP46Q8IYW2 2715 aa14.82□□□□□ -0.04
LIMS2-212ENST00000466410 FCER1GP30273 86 aa14.82□□□□□ -0.04
LIMS2-212ENST00000466410 UQCRFS1P47985 274 aa14.82□□□□□ -0.04
LIMS2-212ENST00000466410 NXT2Q9NPJ8 142 aaKnown RBP14.82□□□□□ -0.04
LIMS2-212ENST00000466410 IGHV7-4-1A0A0J9YVY3 117 aa14.81□□□□□ -0.04
LIMS2-212ENST00000466410 SMAD7O15105 426 aaKnown RBP14.81□□□□□ -0.04
LIMS2-212ENST00000466410 PCP2Q8IVA1 136 aa14.81□□□□□ -0.04
LIMS2-212ENST00000466410 TRAV8-6A0A0B4J262 113 aa14.81□□□□□ -0.04
LIMS2-212ENST00000466410 TRAV41A0A0B4J266 112 aa14.81□□□□□ -0.04
LIMS2-212ENST00000466410 C9orf47Q6ZRZ4 202 aa14.81□□□□□ -0.04
LIMS2-212ENST00000466410 ITLN2Q8WWU7 325 aaPredicted RBP14.81□□□□□ -0.04
LIMS2-212ENST00000466410 MRPL53Q96EL3 112 aaKnown RBP14.81□□□□□ -0.04
LIMS2-212ENST00000466410 C7orf71A4D174 169 aa14.8□□□□□ -0.04
LIMS2-212ENST00000466410 NMUP48645 174 aa14.8□□□□□ -0.04
LIMS2-212ENST00000466410 SEC11AP67812 179 aa14.8□□□□□ -0.04
LIMS2-212ENST00000466410 PIFOQ8TCI5 191 aa14.8□□□□□ -0.04
LIMS2-212ENST00000466410 C19orf54Q5BKX5 351 aa14.8□□□□□ -0.04
LIMS2-212ENST00000466410 BRD3OSQ6XYD6 125 aa14.8□□□□□ -0.04
LIMS2-212ENST00000466410 C16orf92Q96LL3 132 aa14.8□□□□□ -0.04
LIMS2-212ENST00000466410 MOB4Q9Y3A3 225 aa14.8□□□□□ -0.04
LIMS2-212ENST00000466410 TMEM158Q8WZ71 300 aa14.79□□□□□ -0.04
LIMS2-212ENST00000466410 VPS13CQ709C8 3753 aa14.79□□□□□ -0.04
LIMS2-212ENST00000466410 IGLV2-18A0A075B6J9 118 aa14.79□□□□□ -0.04
LIMS2-212ENST00000466410 TRAV26-2A0A0B4J265 109 aa14.79□□□□□ -0.04
LIMS2-212ENST00000466410 A1L4Q6 167 aa14.79□□□□□ -0.04
LIMS2-212ENST00000466410 ODF1Q14990 250 aa14.79□□□□□ -0.04
LIMS2-212ENST00000466410 OR2K2Q8NGT1 345 aa14.79□□□□□ -0.04
LIMS2-212ENST00000466410 HIF1ANQ9NWT6 349 aa14.79□□□□□ -0.04
LIMS2-212ENST00000466410 TRBV12-3P01733 135 aa14.78□□□□□ -0.04
LIMS2-212ENST00000466410 IGHV4-39P01824 125 aa14.78□□□□□ -0.04
LIMS2-212ENST00000466410 RBX1P62877 108 aa14.78□□□□□ -0.04
LIMS2-212ENST00000466410 PRR9Q5T870 116 aa14.78□□□□□ -0.04
LIMS2-212ENST00000466410 GLMPQ8WWB7 406 aa14.78□□□□□ -0.04
LIMS2-212ENST00000466410 C20orf173Q96LM9 149 aa14.78□□□□□ -0.04
LIMS2-212ENST00000466410 UFC1Q9Y3C8 167 aa14.78□□□□□ -0.04
LIMS2-212ENST00000466410 IGF1P05019 195 aa14.78□□□□□ -0.04
LIMS2-212ENST00000466410 UNQ9165/PRO28630Q6UXU0 137 aa14.78□□□□□ -0.04
LIMS2-212ENST00000466410 Q8N8P6 123 aa14.78□□□□□ -0.04
LIMS2-212ENST00000466410 PEF1Q9UBV8 284 aaKnown RBP14.78□□□□□ -0.04
LIMS2-212ENST00000466410 PRSS1P07477 247 aa14.77□□□□□ -0.04
LIMS2-212ENST00000466410 ADAMTSL5Q6ZMM2 481 aa14.77□□□□□ -0.04
LIMS2-212ENST00000466410 OR9G4Q8NGQ1 327 aa14.77□□□□□ -0.04
LIMS2-212ENST00000466410 COL12A1Q99715 3063 aa14.77□□□□□ -0.05
LIMS2-212ENST00000466410 FAM223BA6NKX1 122 aa14.77□□□□□ -0.05
LIMS2-212ENST00000466410 ARL3P36405 182 aa14.77□□□□□ -0.05
LIMS2-212ENST00000466410 FAM223AQ8IWN6 122 aa14.77□□□□□ -0.05
LIMS2-212ENST00000466410 NRACQ8N912 160 aa14.77□□□□□ -0.05
LIMS2-212ENST00000466410 ZMAT4Q9H898 229 aa14.76□□□□□ -0.05
LIMS2-212ENST00000466410 HHLA3Q9XRX5 114 aa14.76□□□□□ -0.05
LIMS2-212ENST00000466410 TRAV40A0A0B4J280 105 aa14.76□□□□□ -0.05
LIMS2-212ENST00000466410 IGHV1-69DA0A0B4J2H0 117 aa14.76□□□□□ -0.05
LIMS2-212ENST00000466410 J3KRW8 73 aa14.76□□□□□ -0.05
LIMS2-212ENST00000466410 IGHV1-69P01742 117 aa14.76□□□□□ -0.05
LIMS2-212ENST00000466410 SPANXN1Q5VSR9 72 aa14.76□□□□□ -0.05
LIMS2-212ENST00000466410 SMIM15Q7Z3B0 74 aa14.76□□□□□ -0.05
LIMS2-212ENST00000466410 IGKV2D-26A0A0A0MRZ7 120 aa14.75□□□□□ -0.05
LIMS2-212ENST00000466410 SIVA1O15304 175 aa14.75□□□□□ -0.05
LIMS2-212ENST00000466410 GNLYP22749 145 aa14.75□□□□□ -0.05
LIMS2-212ENST00000466410 HSD52Q0P140 79 aa14.75□□□□□ -0.05
LIMS2-212ENST00000466410 H3BVH4 76 aa14.75□□□□□ -0.05
LIMS2-212ENST00000466410 GPHB5Q86YW7 130 aa14.75□□□□□ -0.05
LIMS2-212ENST00000466410 FOXC2Q99958 501 aa14.75□□□□□ -0.05
LIMS2-212ENST00000466410 IGSF10Q6WRI0 2623 aa14.75□□□□□ -0.05
LIMS2-212ENST00000466410 DEFB1P60022 68 aa14.74□□□□□ -0.05
LIMS2-212ENST00000466410 ATP6V0BQ99437 205 aa14.74□□□□□ -0.05
LIMS2-212ENST00000466410 TTTY13Q9BZ97 58 aa14.74□□□□□ -0.05
LIMS2-212ENST00000466410 MAP1AP78559 2803 aaPredicted RBP14.74□□□□□ -0.05
LIMS2-212ENST00000466410 SMIM17P0DL12 118 aa14.74□□□□□ -0.05
LIMS2-212ENST00000466410 CRIP2P52943 208 aaPredicted RBP14.74□□□□□ -0.05
LIMS2-212ENST00000466410 C9orf139Q6ZV77 190 aa14.74□□□□□ -0.05
LIMS2-212ENST00000466410 IGHV4-4A0A075B6R2 117 aa14.73□□□□□ -0.05
LIMS2-212ENST00000466410 OR4X2Q8NGF9 303 aa14.73□□□□□ -0.05
LIMS2-212ENST00000466410 IGHV4-61A0A0C4DH41 118 aa14.73□□□□□ -0.05
LIMS2-212ENST00000466410 LY6EQ16553 131 aa14.73□□□□□ -0.05
LIMS2-212ENST00000466410 A6NDN8 102 aa14.72□□□□□ -0.05
LIMS2-212ENST00000466410 SPRY2O43597 315 aa14.72□□□□□ -0.05
LIMS2-212ENST00000466410 IGKCP01834 107 aa14.72□□□□□ -0.05
LIMS2-212ENST00000466410 KIR3DS1Q14943 382 aa14.72□□□□□ -0.05
LIMS2-212ENST00000466410 NAA38Q9BRA0 125 aaKnown RBP14.72□□□□□ -0.05
LIMS2-212ENST00000466410 PRSS47A8MTI9 375 aa14.71□□□□□ -0.05
LIMS2-212ENST00000466410 H3BRM9 83 aa14.71□□□□□ -0.05
LIMS2-212ENST00000466410 IGHV3-11P01762 117 aa14.71□□□□□ -0.05
LIMS2-212ENST00000466410 IGHV4-38-2P0DP08 117 aa14.71□□□□□ -0.05
LIMS2-212ENST00000466410 LAGE3Q14657 143 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms