RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 DHRSXQ8N5I4 330 aa3.63□□□□□ -1.83
NCL-208ENST00000466274 OR4C5Q8NGB2 326 aa3.63□□□□□ -1.83
NCL-208ENST00000466274 OR10P1Q8NGE3 313 aa3.63□□□□□ -1.83
NCL-208ENST00000466274 Q8TAT8 98 aa3.63□□□□□ -1.83
NCL-208ENST00000466274 RASL10AQ92737 203 aa3.63□□□□□ -1.83
NCL-208ENST00000466274 MGLLQ99685 303 aa3.63□□□□□ -1.83
NCL-208ENST00000466274 DUSP21Q9H596 190 aa3.63□□□□□ -1.83
NCL-208ENST00000466274 DAZ3Q9NR90 486 aaKnown RBP3.63□□□□□ -1.83
NCL-208ENST00000466274 RHBDL2Q9NX52 303 aa3.63□□□□□ -1.83
NCL-208ENST00000466274 LOC100131303A0A0U1RQF7 123 aa3.62□□□□□ -1.83
NCL-208ENST00000466274 B3GALNT1O75752 331 aa3.62□□□□□ -1.83
NCL-208ENST00000466274 SMIM18P0DKX4 95 aa3.62□□□□□ -1.83
NCL-208ENST00000466274 CT45A10P0DMU9 189 aa3.62□□□□□ -1.83
NCL-208ENST00000466274 ANXA7P20073 488 aaKnown RBP3.62□□□□□ -1.83
NCL-208ENST00000466274 CCR6P51684 374 aa3.62□□□□□ -1.83
NCL-208ENST00000466274 CACNG7P62955 275 aa3.62□□□□□ -1.83
NCL-208ENST00000466274 GAGE1Q13065 139 aa3.62□□□□□ -1.83
NCL-208ENST00000466274 GAGE4Q13068 117 aa3.62□□□□□ -1.83
NCL-208ENST00000466274 MEF2DQ14814 521 aa3.62□□□□□ -1.83
NCL-208ENST00000466274 GUK1Q16774 197 aa3.62□□□□□ -1.83
NCL-208ENST00000466274 LCN15Q6UWW0 184 aa3.62□□□□□ -1.83
NCL-208ENST00000466274 OR4D10Q8NGI6 311 aa3.62□□□□□ -1.83
NCL-208ENST00000466274 OR52I2Q8NH67 350 aa3.62□□□□□ -1.83
NCL-208ENST00000466274 OR1S1Q8NH92 325 aa3.62□□□□□ -1.83
NCL-208ENST00000466274 LINC00479Q96M42 142 aa3.62□□□□□ -1.83
NCL-208ENST00000466274 SPXQ9BT56 116 aa3.62□□□□□ -1.83
NCL-208ENST00000466274 SHANK2-AS3Q9BTD1 123 aa3.62□□□□□ -1.83
NCL-208ENST00000466274 TMEM222Q9H0R3 208 aa3.62□□□□□ -1.83
NCL-208ENST00000466274 NDUFB11Q9NX14 153 aa3.62□□□□□ -1.83
NCL-208ENST00000466274 IGHV3-64A0A075B6Q5 118 aa3.61□□□□□ -1.83
NCL-208ENST00000466274 A0A087WWC5 75 aa3.61□□□□□ -1.83
NCL-208ENST00000466274 C3orf85A0A1B0GTC6 90 aa3.61□□□□□ -1.83
NCL-208ENST00000466274 H3BRN7 92 aa3.61□□□□□ -1.83
NCL-208ENST00000466274 CIDEAO60543 219 aa3.61□□□□□ -1.83
NCL-208ENST00000466274 HYPMO75409 117 aa3.61□□□□□ -1.83
NCL-208ENST00000466274 PGAM2P15259 253 aa3.61□□□□□ -1.83
NCL-208ENST00000466274 RNASE4P34096 147 aaKnown RBP3.61□□□□□ -1.83
NCL-208ENST00000466274 RND3P61587 244 aa3.61□□□□□ -1.83
NCL-208ENST00000466274 OPCMLQ14982 345 aa3.61□□□□□ -1.83
NCL-208ENST00000466274 RHOHQ15669 191 aa3.61□□□□□ -1.83
NCL-208ENST00000466274 PACRGLQ8N7B6 248 aa3.61□□□□□ -1.83
NCL-208ENST00000466274 UBE2WQ96B02 151 aa3.61□□□□□ -1.83
NCL-208ENST00000466274 ZNF486Q96H40 463 aaPredicted RBP3.61□□□□□ -1.83
NCL-208ENST00000466274 TP53RKQ96S44 253 aa3.61□□□□□ -1.83
NCL-208ENST00000466274 ZNF331Q9NQX6 463 aaPredicted RBP3.61□□□□□ -1.83
NCL-208ENST00000466274 PLAC8Q9NZF1 115 aa3.61□□□□□ -1.83
NCL-208ENST00000466274 HIGD1AQ9Y241 93 aa3.61□□□□□ -1.83
NCL-208ENST00000466274 PXMP4Q9Y6I8 212 aa3.61□□□□□ -1.83
NCL-208ENST00000466274 A0A087WX48 190 aa3.6□□□□□ -1.83
NCL-208ENST00000466274 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.6□□□□□ -1.83
NCL-208ENST00000466274 TRDV1A0A1B0GX56 115 aa3.6□□□□□ -1.83
NCL-208ENST00000466274 hDV102S1A0JD36 115 aa3.6□□□□□ -1.83
NCL-208ENST00000466274 PGPA6NDG6 321 aa3.6□□□□□ -1.83
NCL-208ENST00000466274 KLLNB2CW77 178 aa3.6□□□□□ -1.83
NCL-208ENST00000466274 ATP5HO75947 161 aa3.6□□□□□ -1.83
NCL-208ENST00000466274 TNFAIP8O95379 198 aa3.6□□□□□ -1.83
NCL-208ENST00000466274 GPX1P07203 203 aa3.6□□□□□ -1.83
NCL-208ENST00000466274 NMBP08949 121 aa3.6□□□□□ -1.83
NCL-208ENST00000466274 GATA1P15976 413 aaPredicted RBP3.6□□□□□ -1.83
NCL-208ENST00000466274 RCVRNP35243 200 aa3.6□□□□□ -1.83
NCL-208ENST00000466274 POLR2GP62487 172 aaKnown RBP eCLIP3.6□□□□□ -1.83
NCL-208ENST00000466274 RAB11AP62491 216 aa3.6□□□□□ -1.83
NCL-208ENST00000466274 LCE3CQ5T5A8 94 aa3.6□□□□□ -1.83
NCL-208ENST00000466274 ATRAIDQ6UW56 229 aa3.6□□□□□ -1.83
NCL-208ENST00000466274 CCDC71LQ8N9Z2 235 aa3.6□□□□□ -1.83
NCL-208ENST00000466274 SPACA4Q8TDM5 124 aa3.6□□□□□ -1.83
NCL-208ENST00000466274 LINC00477Q96M19 166 aa3.6□□□□□ -1.83
NCL-208ENST00000466274 CHCHD7Q9BUK0 85 aa3.6□□□□□ -1.83
NCL-208ENST00000466274 GFRA4Q9GZZ7 299 aa3.6□□□□□ -1.83
NCL-208ENST00000466274 KLK12Q9UKR0 248 aa3.6□□□□□ -1.83
NCL-208ENST00000466274 TP53TG3Q9ULZ0 132 aa3.6□□□□□ -1.83
NCL-208ENST00000466274 TEX13DA0A0J9YY54 714 aaPredicted RBP3.59□□□□□ -1.83
NCL-208ENST00000466274 LINC00854A0A1B0GVQ3 168 aa3.59□□□□□ -1.83
NCL-208ENST00000466274 TRBV6-4A0A1B0GX49 114 aa3.59□□□□□ -1.83
NCL-208ENST00000466274 FBLL1A6NHQ2 334 aaKnown RBP3.59□□□□□ -1.83
NCL-208ENST00000466274 PMS2P5A8MQ11 134 aa3.59□□□□□ -1.83
NCL-208ENST00000466274 PRSS1P07477 247 aa3.59□□□□□ -1.83
NCL-208ENST00000466274 OR5G3P0C626 314 aa3.59□□□□□ -1.83
NCL-208ENST00000466274 OR4E1P0C645 316 aa3.59□□□□□ -1.83
NCL-208ENST00000466274 PIGPP57054 158 aa3.59□□□□□ -1.83
NCL-208ENST00000466274 SRSF9Q13242 221 aaKnown RBP eCLIP3.59□□□□□ -1.83
NCL-208ENST00000466274 BTN1A1Q13410 526 aa3.59□□□□□ -1.83
NCL-208ENST00000466274 SPCS2Q15005 226 aa3.59□□□□□ -1.83
NCL-208ENST00000466274 Q6ZRP5 223 aa3.59□□□□□ -1.83
NCL-208ENST00000466274 PRSS48Q7RTY5 328 aa3.59□□□□□ -1.83
NCL-208ENST00000466274 SLC25A29Q8N8R3 303 aa3.59□□□□□ -1.83
NCL-208ENST00000466274 LHFPL5Q8TAF8 219 aa3.59□□□□□ -1.83
NCL-208ENST00000466274 MARCH1Q8TCQ1 289 aa3.59□□□□□ -1.83
NCL-208ENST00000466274 DTD1Q8TEA8 209 aa3.59□□□□□ -1.83
NCL-208ENST00000466274 TXNL4BQ9NX01 149 aaKnown RBP3.59□□□□□ -1.83
NCL-208ENST00000466274 SCN3BQ9NY72 215 aa3.59□□□□□ -1.83
NCL-208ENST00000466274 COPZ2Q9P299 210 aa3.59□□□□□ -1.83
NCL-208ENST00000466274 IGHV3-16A0A0C4DH30 117 aa3.58□□□□□ -1.84
NCL-208ENST00000466274 ANKRD65E5RJM6 399 aa3.58□□□□□ -1.84
NCL-208ENST00000466274 M0R2P5 195 aa3.58□□□□□ -1.84
NCL-208ENST00000466274 HLA-DQA1P01909 254 aa3.58□□□□□ -1.84
NCL-208ENST00000466274 CRPP02741 224 aa3.58□□□□□ -1.84
NCL-208ENST00000466274 IL5P05113 134 aa3.58□□□□□ -1.84
NCL-208ENST00000466274 HLA-DMAP28067 261 aa3.58□□□□□ -1.84
NCL-208ENST00000466274 SDC2P34741 201 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms