RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 LOC107986453A0A1B0GWG9 222 aa0.2□□□□□ -2.38
LRCH3-211ENST00000466054 SRP9P49458 86 aaKnown RBP0.2□□□□□ -2.38
LRCH3-211ENST00000466054 STX12Q86Y82 276 aa0.2□□□□□ -2.38
LRCH3-211ENST00000466054 NABP2Q9BQ15 211 aa0.2□□□□□ -2.38
LRCH3-211ENST00000466054 LXNQ9BS40 222 aa0.2□□□□□ -2.38
LRCH3-211ENST00000466054 FAT4Q6V0I7 4981 aa0.2□□□□□ -2.38
LRCH3-211ENST00000466054 TRBV7-6A0A0J9YX20 115 aa0.19□□□□□ -2.38
LRCH3-211ENST00000466054 FAM107AO95990 144 aa0.19□□□□□ -2.38
LRCH3-211ENST00000466054 CSAG1Q6PB30 78 aa0.19□□□□□ -2.38
LRCH3-211ENST00000466054 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.19□□□□□ -2.38
LRCH3-211ENST00000466054 PCBD2Q9H0N5 130 aa0.19□□□□□ -2.38
LRCH3-211ENST00000466054 FGD6Q6ZV73 1430 aa0.19□□□□□ -2.38
LRCH3-211ENST00000466054 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.18□□□□□ -2.38
LRCH3-211ENST00000466054 MEGF8Q7Z7M0 2845 aa0.18□□□□□ -2.38
LRCH3-211ENST00000466054 TRAV13-1A0A0B4J241 112 aa0.18□□□□□ -2.38
LRCH3-211ENST00000466054 A0A1W2PRE2 83 aa0.18□□□□□ -2.38
LRCH3-211ENST00000466054 E7EQ34 232 aa0.18□□□□□ -2.38
LRCH3-211ENST00000466054 LY6G6CO95867 125 aa0.18□□□□□ -2.38
LRCH3-211ENST00000466054 IGF2P01344 180 aa0.18□□□□□ -2.38
LRCH3-211ENST00000466054 G0S2P27469 103 aa0.18□□□□□ -2.38
LRCH3-211ENST00000466054 GNG10P50151 68 aa0.18□□□□□ -2.38
LRCH3-211ENST00000466054 RPL37P61927 97 aaKnown RBP0.18□□□□□ -2.38
LRCH3-211ENST00000466054 MORN4Q8NDC4 146 aa0.18□□□□□ -2.38
LRCH3-211ENST00000466054 TRPM7Q96QT4 1865 aa0.18□□□□□ -2.38
LRCH3-211ENST00000466054 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.17□□□□□ -2.38
LRCH3-211ENST00000466054 IFITM5A6NNB3 132 aa0.17□□□□□ -2.38
LRCH3-211ENST00000466054 FXYD3Q14802 87 aa0.17□□□□□ -2.38
LRCH3-211ENST00000466054 LINC00208Q96KT6 92 aa0.17□□□□□ -2.38
LRCH3-211ENST00000466054 MED31Q9Y3C7 131 aa0.17□□□□□ -2.38
LRCH3-211ENST00000466054 MAST4O15021 2626 aa0.17□□□□□ -2.38
LRCH3-211ENST00000466054 FAM135BQ49AJ0 1406 aa0.16□□□□□ -2.38
LRCH3-211ENST00000466054 LOC107984156A0A0G2JMH3 177 aa0.16□□□□□ -2.38
LRCH3-211ENST00000466054 NBDYA0A0U1RRE5 68 aa0.16□□□□□ -2.38
LRCH3-211ENST00000466054 HIGD1CA8MV81 97 aa0.16□□□□□ -2.38
LRCH3-211ENST00000466054 H3BMG7 143 aa0.16□□□□□ -2.38
LRCH3-211ENST00000466054 ARL17AQ8IVW1 177 aa0.16□□□□□ -2.38
LRCH3-211ENST00000466054 TEX29Q8N6K0 151 aa0.16□□□□□ -2.38
LRCH3-211ENST00000466054 OR8J3Q8NGG0 315 aa0.16□□□□□ -2.38
LRCH3-211ENST00000466054 THEM6Q8WUY1 208 aa0.16□□□□□ -2.38
LRCH3-211ENST00000466054 FKBP11Q9NYL4 201 aa0.16□□□□□ -2.38
LRCH3-211ENST00000466054 MRPL36Q9P0J6 103 aaKnown RBP0.16□□□□□ -2.38
LRCH3-211ENST00000466054 NINQ8N4C6 2090 aa0.16□□□□□ -2.38
LRCH3-211ENST00000466054 SYNE1Q8NF91 8797 aaKnown RBP0.15□□□□□ -2.38
LRCH3-211ENST00000466054 ETV6P41212 452 aa0.15□□□□□ -2.39
LRCH3-211ENST00000466054 LSM3P62310 102 aaKnown RBP0.15□□□□□ -2.39
LRCH3-211ENST00000466054 PPP1R2P3Q6NXS1 205 aa0.15□□□□□ -2.39
LRCH3-211ENST00000466054 C5orf56Q8N8D9 126 aa0.15□□□□□ -2.39
LRCH3-211ENST00000466054 TMEM30CPA0ZSE6 113 aa0.14□□□□□ -2.39
LRCH3-211ENST00000466054 SLC25A4P12235 298 aa0.14□□□□□ -2.39
LRCH3-211ENST00000466054 CRYGSP22914 178 aa0.14□□□□□ -2.39
LRCH3-211ENST00000466054 POLR2HP52434 150 aaKnown RBP0.14□□□□□ -2.39
LRCH3-211ENST00000466054 GTF2A1P52655 376 aaPredicted RBP0.14□□□□□ -2.39
LRCH3-211ENST00000466054 ZNF56Q15929 161 aa0.14□□□□□ -2.39
LRCH3-211ENST00000466054 HRCT1Q6UXD1 115 aa0.14□□□□□ -2.39
LRCH3-211ENST00000466054 OR51A4Q8NGJ6 313 aa0.14□□□□□ -2.39
LRCH3-211ENST00000466054 FER1L6Q2WGJ9 1857 aa0.14□□□□□ -2.39
LRCH3-211ENST00000466054 AFDNP55196 1824 aaKnown RBP0.13□□□□□ -2.39
LRCH3-211ENST00000466054 LOC101927531A0A1B0GV80 90 aa0.13□□□□□ -2.39
LRCH3-211ENST00000466054 TMEM189A5PLL7 270 aa0.13□□□□□ -2.39
LRCH3-211ENST00000466054 EDF1O60869 148 aaKnown RBP0.13□□□□□ -2.39
LRCH3-211ENST00000466054 BLCAPP62952 87 aa0.13□□□□□ -2.39
LRCH3-211ENST00000466054 ASB16-AS1Q495Z4 193 aa0.13□□□□□ -2.39
LRCH3-211ENST00000466054 DMAC1Q96GE9 116 aa0.13□□□□□ -2.39
LRCH3-211ENST00000466054 SMIM7Q9BQ49 75 aa0.13□□□□□ -2.39
LRCH3-211ENST00000466054 CBLN4Q9NTU7 201 aa0.13□□□□□ -2.39
LRCH3-211ENST00000466054 COMMD3Q9UBI1 195 aa0.13□□□□□ -2.39
LRCH3-211ENST00000466054 A2MP01023 1474 aa0.13□□□□□ -2.39
LRCH3-211ENST00000466054 BDP1A6H8Y1 2624 aa0.12□□□□□ -2.39
LRCH3-211ENST00000466054 LOC107984640A0A0U1RRK4 108 aa0.12□□□□□ -2.39
LRCH3-211ENST00000466054 PGRMC1O00264 195 aaKnown RBP0.12□□□□□ -2.39
LRCH3-211ENST00000466054 TPST1O60507 370 aa0.12□□□□□ -2.39
LRCH3-211ENST00000466054 RHOHQ15669 191 aa0.12□□□□□ -2.39
LRCH3-211ENST00000466054 NAT14Q8WUY8 206 aa0.12□□□□□ -2.39
LRCH3-211ENST00000466054 CENPHQ9H3R5 247 aa0.12□□□□□ -2.39
LRCH3-211ENST00000466054 RBBP6Q7Z6E9 1792 aaKnown RBP0.11□□□□□ -2.39
LRCH3-211ENST00000466054 LYPD5Q6UWN5 251 aa0.11□□□□□ -2.39
LRCH3-211ENST00000466054 TOMM20LQ6UXN7 152 aa0.11□□□□□ -2.39
LRCH3-211ENST00000466054 OR9Q1Q8NGQ5 310 aa0.11□□□□□ -2.39
LRCH3-211ENST00000466054 SMPXQ9UHP9 88 aa0.11□□□□□ -2.39
LRCH3-211ENST00000466054 A0A0G2JMM0 328 aa0.1□□□□□ -2.39
LRCH3-211ENST00000466054 FXYD1O00168 92 aa0.1□□□□□ -2.39
LRCH3-211ENST00000466054 HBDP02042 147 aa0.1□□□□□ -2.39
LRCH3-211ENST00000466054 RPL22P35268 128 aaKnown RBP0.1□□□□□ -2.39
LRCH3-211ENST00000466054 IDO2Q6ZQW0 420 aa0.1□□□□□ -2.39
LRCH3-211ENST00000466054 OR5A2Q8NGI9 324 aa0.1□□□□□ -2.39
LRCH3-211ENST00000466054 TRAPPC2LQ9UL33 140 aa0.1□□□□□ -2.39
LRCH3-211ENST00000466054 V9GYQ6 96 aa0.1□□□□□ -2.39
LRCH3-211ENST00000466054 MYH1P12882 1939 aa0.1□□□□□ -2.39
LRCH3-211ENST00000466054 A0A1B0GV72 72 aa0.09□□□□□ -2.4
LRCH3-211ENST00000466054 RPL7P18124 248 aaKnown RBP0.09□□□□□ -2.4
LRCH3-211ENST00000466054 KLKP1Q107X0 134 aa0.09□□□□□ -2.4
LRCH3-211ENST00000466054 Q5XG85 94 aa0.09□□□□□ -2.4
LRCH3-211ENST00000466054 CDC42EP2O14613 210 aa0.08□□□□□ -2.4
LRCH3-211ENST00000466054 UQCRQO14949 82 aa0.08□□□□□ -2.4
LRCH3-211ENST00000466054 CKS2P33552 79 aa0.08□□□□□ -2.4
LRCH3-211ENST00000466054 TFAMQ00059 246 aaKnown RBP0.08□□□□□ -2.4
LRCH3-211ENST00000466054 ATG5Q9H1Y0 275 aa0.08□□□□□ -2.4
LRCH3-211ENST00000466054 WDR97A6NE52 1622 aa0.08□□□□□ -2.4
LRCH3-211ENST00000466054 CDK12Q9NYV4 1490 aaPredicted RBP0.08□□□□□ -2.4
LRCH3-211ENST00000466054 A0A096LNT2 108 aa0.07□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms