RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 PKHD1L1Q86WI1 4243 aa6.61□□□□□ -1.35
USP39-212ENST00000465514 IGKV2-40A0A087WW87 121 aaPredicted RBP6.61□□□□□ -1.35
USP39-212ENST00000465514 RGS13O14921 159 aa6.61□□□□□ -1.35
USP39-212ENST00000465514 LYRM1O43325 122 aa6.61□□□□□ -1.35
USP39-212ENST00000465514 IGKV2D-40P01614 121 aaPredicted RBP6.61□□□□□ -1.35
USP39-212ENST00000465514 HBG1P69891 147 aa6.61□□□□□ -1.35
USP39-212ENST00000465514 HBG2P69892 147 aa6.61□□□□□ -1.35
USP39-212ENST00000465514 PDE6HQ13956 83 aa6.61□□□□□ -1.35
USP39-212ENST00000465514 GCSAMLQ5JQS6 135 aa6.61□□□□□ -1.35
USP39-212ENST00000465514 IBA57Q5T440 356 aaKnown RBP6.61□□□□□ -1.35
USP39-212ENST00000465514 PRR9Q5T870 116 aa6.61□□□□□ -1.35
USP39-212ENST00000465514 Q6ZQT7 251 aa6.61□□□□□ -1.35
USP39-212ENST00000465514 STX12Q86Y82 276 aa6.61□□□□□ -1.35
USP39-212ENST00000465514 TMEM252Q8N6L7 170 aa6.61□□□□□ -1.35
USP39-212ENST00000465514 ZFAND2AQ8N6M9 145 aa6.61□□□□□ -1.35
USP39-212ENST00000465514 ST6GAL2Q96JF0 529 aa6.61□□□□□ -1.35
USP39-212ENST00000465514 VGLL1Q99990 258 aa6.61□□□□□ -1.35
USP39-212ENST00000465514 AAMDCQ9H7C9 122 aa6.61□□□□□ -1.35
USP39-212ENST00000465514 BATF3Q9NR55 127 aa6.61□□□□□ -1.35
USP39-212ENST00000465514 MRPL16Q9NX20 251 aaKnown RBP6.61□□□□□ -1.35
USP39-212ENST00000465514 IGHV1OR15-1A0A075B7D0 117 aa6.6□□□□□ -1.35
USP39-212ENST00000465514 A6NHS1 94 aa6.6□□□□□ -1.35
USP39-212ENST00000465514 NMBP08949 121 aa6.6□□□□□ -1.35
USP39-212ENST00000465514 CRYBA4P53673 196 aa6.6□□□□□ -1.35
USP39-212ENST00000465514 IL15RAQ13261 267 aa6.6□□□□□ -1.35
USP39-212ENST00000465514 RAB32Q13637 225 aa6.6□□□□□ -1.35
USP39-212ENST00000465514 FHL2Q14192 279 aa6.6□□□□□ -1.35
USP39-212ENST00000465514 ATP6V1FQ16864 119 aa6.6□□□□□ -1.35
USP39-212ENST00000465514 TMEM78Q5T7P6 136 aa6.6□□□□□ -1.35
USP39-212ENST00000465514 FAM122CQ6P4D5 195 aa6.6□□□□□ -1.35
USP39-212ENST00000465514 LYPD5Q6UWN5 251 aa6.6□□□□□ -1.35
USP39-212ENST00000465514 C8orf49Q96NF6 230 aa6.6□□□□□ -1.35
USP39-212ENST00000465514 TMEM70Q9BUB7 260 aa6.6□□□□□ -1.35
USP39-212ENST00000465514 SLC25A2Q9BXI2 301 aa6.6□□□□□ -1.35
USP39-212ENST00000465514 GPN1Q9HCN4 374 aaPredicted RBP6.6□□□□□ -1.35
USP39-212ENST00000465514 NUDT15Q9NV35 164 aa6.6□□□□□ -1.35
USP39-212ENST00000465514 PRO0255Q9UI72 69 aa6.6□□□□□ -1.35
USP39-212ENST00000465514 HHLA3Q9XRX5 114 aa6.6□□□□□ -1.35
USP39-212ENST00000465514 A0A087WTM6 91 aa6.59□□□□□ -1.35
USP39-212ENST00000465514 PRAF2O60831 178 aa6.59□□□□□ -1.35
USP39-212ENST00000465514 OXTP01178 125 aa6.59□□□□□ -1.35
USP39-212ENST00000465514 H2AFB2P0C5Z0 115 aa6.59□□□□□ -1.35
USP39-212ENST00000465514 NBEAP1P0C6P0 100 aa6.59□□□□□ -1.35
USP39-212ENST00000465514 SLAQ13239 276 aa6.59□□□□□ -1.35
USP39-212ENST00000465514 MRPL23Q16540 153 aaKnown RBP6.59□□□□□ -1.35
USP39-212ENST00000465514 MIR17HGQ75NE6 70 aa6.59□□□□□ -1.35
USP39-212ENST00000465514 FAM167A-AS1Q96KT0 104 aa6.59□□□□□ -1.35
USP39-212ENST00000465514 ARPC5LQ9BPX5 153 aa6.59□□□□□ -1.35
USP39-212ENST00000465514 NPCDR1Q9BY65 106 aa6.59□□□□□ -1.35
USP39-212ENST00000465514 ZNF492Q9P255 531 aa6.59□□□□□ -1.35
USP39-212ENST00000465514 OR10J4P0C629 311 aa6.58□□□□□ -1.36
USP39-212ENST00000465514 ZNF138P52744 262 aa6.58□□□□□ -1.36
USP39-212ENST00000465514 NHLH2Q02577 135 aa6.58□□□□□ -1.36
USP39-212ENST00000465514 NEGR1Q7Z3B1 354 aa6.58□□□□□ -1.36
USP39-212ENST00000465514 NFE4Q86UQ8 179 aa6.58□□□□□ -1.36
USP39-212ENST00000465514 Q8TAT8 98 aa6.58□□□□□ -1.36
USP39-212ENST00000465514 THAP6Q8TBB0 222 aa6.58□□□□□ -1.36
USP39-212ENST00000465514 MRPL32Q9BYC8 188 aaKnown RBP6.58□□□□□ -1.36
USP39-212ENST00000465514 OR51M1Q9H341 326 aa6.58□□□□□ -1.36
USP39-212ENST00000465514 NDUFA13Q9P0J0 144 aa6.58□□□□□ -1.36
USP39-212ENST00000465514 TRAV9-2A0A087WT02 112 aa6.57□□□□□ -1.36
USP39-212ENST00000465514 TRGV4A0A0C4DH28 118 aa6.57□□□□□ -1.36
USP39-212ENST00000465514 E5RGE8 158 aa6.57□□□□□ -1.36
USP39-212ENST00000465514 SFTA3P0C7M3 94 aa6.57□□□□□ -1.36
USP39-212ENST00000465514 ZNF415Q09FC8 603 aa6.57□□□□□ -1.36
USP39-212ENST00000465514 MUC21Q5SSG8 566 aa6.57□□□□□ -1.36
USP39-212ENST00000465514 OR5C1Q8NGR4 320 aa6.57□□□□□ -1.36
USP39-212ENST00000465514 FXYD5Q96DB9 178 aa6.57□□□□□ -1.36
USP39-212ENST00000465514 PHYHIPLQ96FC7 376 aa6.57□□□□□ -1.36
USP39-212ENST00000465514 PAXXQ9BUH6 204 aa6.57□□□□□ -1.36
USP39-212ENST00000465514 LY96Q9Y6Y9 160 aa6.57□□□□□ -1.36
USP39-212ENST00000465514 TRBV7-9A0A0J9YWB2 115 aa6.56□□□□□ -1.36
USP39-212ENST00000465514 K7EQD1 137 aa6.56□□□□□ -1.36
USP39-212ENST00000465514 SRIP30626 198 aa6.56□□□□□ -1.36
USP39-212ENST00000465514 ZNF266Q14584 549 aa6.56□□□□□ -1.36
USP39-212ENST00000465514 WFDC10BQ8IUB3 73 aa6.56□□□□□ -1.36
USP39-212ENST00000465514 IQCF2Q8IXL9 164 aa6.56□□□□□ -1.36
USP39-212ENST00000465514 ZNF479Q96JC4 524 aa6.56□□□□□ -1.36
USP39-212ENST00000465514 KRTAP9-2Q9BYQ4 174 aa6.56□□□□□ -1.36
USP39-212ENST00000465514 MSRB1Q9NZV6 116 aa6.56□□□□□ -1.36
USP39-212ENST00000465514 DNAH8Q96JB1 4490 aa6.55□□□□□ -1.36
USP39-212ENST00000465514 FAM240BA0A1B0GVZ2 78 aa6.55□□□□□ -1.36
USP39-212ENST00000465514 RBAKDNA6NC62 111 aa6.55□□□□□ -1.36
USP39-212ENST00000465514 SIX6O95475 246 aa6.55□□□□□ -1.36
USP39-212ENST00000465514 GYPEP15421 78 aa6.55□□□□□ -1.36
USP39-212ENST00000465514 EVI2AP22794 236 aa6.55□□□□□ -1.36
USP39-212ENST00000465514 CSN1S1P47710 185 aa6.55□□□□□ -1.36
USP39-212ENST00000465514 RANP62826 216 aaKnown RBP6.55□□□□□ -1.36
USP39-212ENST00000465514 TMEM183BQ1AE95 376 aa6.55□□□□□ -1.36
USP39-212ENST00000465514 TMEM183AQ8IXX5 376 aa6.55□□□□□ -1.36
USP39-212ENST00000465514 OR10G4Q8NGN3 311 aa6.55□□□□□ -1.36
USP39-212ENST00000465514 PCNPQ8WW12 178 aaKnown RBP6.55□□□□□ -1.36
USP39-212ENST00000465514 RASL10AQ92737 203 aa6.55□□□□□ -1.36
USP39-212ENST00000465514 KRTAP4-8Q9BYQ9 185 aa6.55□□□□□ -1.36
USP39-212ENST00000465514 SLC25A31Q9H0C2 315 aa6.55□□□□□ -1.36
USP39-212ENST00000465514 FAM30AQ9NZY2 134 aa6.55□□□□□ -1.36
USP39-212ENST00000465514 IGLV5-52A0A0A0MRZ9 124 aa6.54□□□□□ -1.36
USP39-212ENST00000465514 K7EP13 123 aa6.54□□□□□ -1.36
USP39-212ENST00000465514 OR7C2O60412 319 aa6.54□□□□□ -1.36
USP39-212ENST00000465514 ORM1P02763 201 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms