RNA–Protein interactions for RNA: ENST00000465421.5

SIK3-207, Transcript of SIK family kinase 3, humanhuman

TSL 2

Gene SIK3, Length 3,459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-207ENST00000465421 DEFB104AQ8WTQ1 72 aa5.06□□□□□ -1.6
SIK3-207ENST00000465421 PTH2Q96A98 100 aa5.06□□□□□ -1.6
SIK3-207ENST00000465421 CARD19Q96LW7 228 aa5.06□□□□□ -1.6
SIK3-207ENST00000465421 LYPD1Q8N2G4 141 aa5.06□□□□□ -1.6
SIK3-207ENST00000465421 IGLV2-18A0A075B6J9 118 aa5.06□□□□□ -1.6
SIK3-207ENST00000465421 K7EM74 188 aa5.06□□□□□ -1.6
SIK3-207ENST00000465421 IGLC6P0CF74 106 aa5.06□□□□□ -1.6
SIK3-207ENST00000465421 DEFB109BQ30KR1 87 aa5.06□□□□□ -1.6
SIK3-207ENST00000465421 TMEM133Q9H2Q1 129 aa5.06□□□□□ -1.6
SIK3-207ENST00000465421 SS18L2Q9UHA2 77 aa5.06□□□□□ -1.6
SIK3-207ENST00000465421 PROCRQ9UNN8 238 aa5.06□□□□□ -1.6
SIK3-207ENST00000465421 ATP5LO75964 103 aa5.05□□□□□ -1.6
SIK3-207ENST00000465421 PRSS1P07477 247 aa5.05□□□□□ -1.6
SIK3-207ENST00000465421 CNTFRP26992 372 aa5.05□□□□□ -1.6
SIK3-207ENST00000465421 TNFAIP6P98066 277 aaPredicted RBP5.05□□□□□ -1.6
SIK3-207ENST00000465421 PLGLAQ15195 96 aa5.05□□□□□ -1.6
SIK3-207ENST00000465421 CCL17Q92583 94 aa5.05□□□□□ -1.6
SIK3-207ENST00000465421 FAM215AQ9Y5M1 114 aa5.05□□□□□ -1.6
SIK3-207ENST00000465421 TRAV40A0A0B4J280 105 aa5.05□□□□□ -1.6
SIK3-207ENST00000465421 SH2D1AO60880 128 aa5.05□□□□□ -1.6
SIK3-207ENST00000465421 NHLRC4P0CG21 123 aaPredicted RBP5.05□□□□□ -1.6
SIK3-207ENST00000465421 RPL32P62910 135 aaKnown RBP5.05□□□□□ -1.6
SIK3-207ENST00000465421 TWIST1Q15672 202 aa5.05□□□□□ -1.6
SIK3-207ENST00000465421 FOXC2Q99958 501 aa5.05□□□□□ -1.6
SIK3-207ENST00000465421 CNFNQ9BYD5 112 aa5.05□□□□□ -1.6
SIK3-207ENST00000465421 ZZEF1O43149 2961 aa5.05□□□□□ -1.6
SIK3-207ENST00000465421 M0QXV9 152 aa5.04□□□□□ -1.6
SIK3-207ENST00000465421 NUP37Q8NFH4 326 aa5.04□□□□□ -1.6
SIK3-207ENST00000465421 MAP1LC3AQ9H492 121 aa5.04□□□□□ -1.6
SIK3-207ENST00000465421 VPREB3Q9UKI3 123 aa5.04□□□□□ -1.6
SIK3-207ENST00000465421 LINC01548A6NM66 108 aa5.04□□□□□ -1.6
SIK3-207ENST00000465421 H3BRN7 92 aa5.04□□□□□ -1.6
SIK3-207ENST00000465421 GAGE5Q13069 117 aa5.04□□□□□ -1.6
SIK3-207ENST00000465421 GAGE6Q13070 117 aa5.04□□□□□ -1.6
SIK3-207ENST00000465421 SBSPONQ8IVN8 264 aa5.04□□□□□ -1.6
SIK3-207ENST00000465421 HIST1H4GQ99525 98 aa5.04□□□□□ -1.6
SIK3-207ENST00000465421 SHANK2-AS3Q9BTD1 123 aa5.04□□□□□ -1.6
SIK3-207ENST00000465421 NXT2Q9NPJ8 142 aaKnown RBP5.04□□□□□ -1.6
SIK3-207ENST00000465421 MRPL35Q9NZE8 188 aaKnown RBP5.04□□□□□ -1.6
SIK3-207ENST00000465421 ARHGAP32A7KAX9 2087 aa5.04□□□□□ -1.6
SIK3-207ENST00000465421 ZNF292O60281 2723 aa5.04□□□□□ -1.6
SIK3-207ENST00000465421 SVEP1Q4LDE5 3571 aa5.04□□□□□ -1.6
SIK3-207ENST00000465421 FCN3O75636 299 aa5.04□□□□□ -1.6
SIK3-207ENST00000465421 IGHV3-23P01764 117 aa5.04□□□□□ -1.6
SIK3-207ENST00000465421 GLRXP35754 106 aa5.04□□□□□ -1.6
SIK3-207ENST00000465421 UBE2D3P61077 147 aa5.04□□□□□ -1.6
SIK3-207ENST00000465421 UBE2D2P62837 147 aa5.04□□□□□ -1.6
SIK3-207ENST00000465421 Q8TAT8 98 aa5.04□□□□□ -1.6
SIK3-207ENST00000465421 DLX4Q92988 240 aaPredicted RBP5.04□□□□□ -1.6
SIK3-207ENST00000465421 A0A087WX48 190 aa5.03□□□□□ -1.6
SIK3-207ENST00000465421 EGR2P11161 476 aaPredicted RBP5.03□□□□□ -1.6
SIK3-207ENST00000465421 TEX36Q5VZQ5 186 aa5.03□□□□□ -1.6
SIK3-207ENST00000465421 ZNF474Q6S9Z5 364 aaPredicted RBP5.03□□□□□ -1.6
SIK3-207ENST00000465421 MSRB1Q9NZV6 116 aa5.03□□□□□ -1.6
SIK3-207ENST00000465421 I3L2K1 104 aa5.03□□□□□ -1.6
SIK3-207ENST00000465421 HOXA3O43365 443 aaPredicted RBP5.03□□□□□ -1.6
SIK3-207ENST00000465421 IGKV1-17P01599 117 aa5.03□□□□□ -1.6
SIK3-207ENST00000465421 COX7A1P24310 79 aa5.03□□□□□ -1.6
SIK3-207ENST00000465421 SRSF2Q01130 221 aaKnown RBP5.03□□□□□ -1.6
SIK3-207ENST00000465421 Q8N8P6 123 aa5.03□□□□□ -1.6
SIK3-207ENST00000465421 C8orf31Q8N9H6 132 aa5.03□□□□□ -1.6
SIK3-207ENST00000465421 PPDPFLQ8WWR9 84 aa5.03□□□□□ -1.6
SIK3-207ENST00000465421 ANAPC13Q9BS18 74 aa5.03□□□□□ -1.6
SIK3-207ENST00000465421 C1orf43Q9BWL3 253 aa5.03□□□□□ -1.6
SIK3-207ENST00000465421 KLK15Q9H2R5 256 aa5.03□□□□□ -1.6
SIK3-207ENST00000465421 RNF7Q9UBF6 113 aa5.03□□□□□ -1.6
SIK3-207ENST00000465421 COL6A6A6NMZ7 2263 aa5.03□□□□□ -1.6
SIK3-207ENST00000465421 PRSS29PA6NIE9 313 aa5.03□□□□□ -1.6
SIK3-207ENST00000465421 TEX22C9J3V5 150 aa5.03□□□□□ -1.6
SIK3-207ENST00000465421 CNIH1O95406 144 aa5.03□□□□□ -1.6
SIK3-207ENST00000465421 UBE2D1P51668 147 aa5.03□□□□□ -1.6
SIK3-207ENST00000465421 TEN1Q86WV5 123 aa5.03□□□□□ -1.6
SIK3-207ENST00000465421 LINC00311Q8N616 119 aa5.03□□□□□ -1.6
SIK3-207ENST00000465421 FAM57AQ8TBR7 257 aa5.03□□□□□ -1.6
SIK3-207ENST00000465421 DUX5Q96PT3 197 aa5.03□□□□□ -1.6
SIK3-207ENST00000465421 CSDC2Q9Y534 153 aaKnown RBP5.03□□□□□ -1.6
SIK3-207ENST00000465421 IGHV3OR16-13A0A075B7E8 117 aa5.02□□□□□ -1.61
SIK3-207ENST00000465421 IGHV3-74A0A0B4J1X5 117 aa5.02□□□□□ -1.61
SIK3-207ENST00000465421 MYMXA0A1B0GTQ4 84 aa5.02□□□□□ -1.61
SIK3-207ENST00000465421 GATA1P15976 413 aaPredicted RBP5.02□□□□□ -1.61
SIK3-207ENST00000465421 SRD5A1P18405 259 aa5.02□□□□□ -1.61
SIK3-207ENST00000465421 CD40P25942 277 aa5.02□□□□□ -1.61
SIK3-207ENST00000465421 ARL3P36405 182 aa5.02□□□□□ -1.61
SIK3-207ENST00000465421 ZNF80P51504 273 aaPredicted RBP5.02□□□□□ -1.61
SIK3-207ENST00000465421 VMA21Q3ZAQ7 101 aa5.02□□□□□ -1.61
SIK3-207ENST00000465421 PLNP26678 52 aa5.02□□□□□ -1.61
SIK3-207ENST00000465421 IGKV2-40A0A087WW87 121 aaPredicted RBP5.02□□□□□ -1.61
SIK3-207ENST00000465421 SPRY2O43597 315 aa5.02□□□□□ -1.61
SIK3-207ENST00000465421 IGKV2D-40P01614 121 aaPredicted RBP5.02□□□□□ -1.61
SIK3-207ENST00000465421 ORM1P02763 201 aa5.02□□□□□ -1.61
SIK3-207ENST00000465421 LGALS1P09382 135 aaKnown RBP5.02□□□□□ -1.61
SIK3-207ENST00000465421 FAM27E3Q08E93 113 aa5.02□□□□□ -1.61
SIK3-207ENST00000465421 PDE6HQ13956 83 aa5.02□□□□□ -1.61
SIK3-207ENST00000465421 ZNF672Q499Z4 452 aaPredicted RBP5.02□□□□□ -1.61
SIK3-207ENST00000465421 ZFP2Q6ZN57 461 aa5.02□□□□□ -1.61
SIK3-207ENST00000465421 PRR25Q96S07 402 aa5.02□□□□□ -1.61
SIK3-207ENST00000465421 FBXL15Q9H469 300 aa5.02□□□□□ -1.61
SIK3-207ENST00000465421 TRAV12-1A0A0B4J245 112 aa5.01□□□□□ -1.61
SIK3-207ENST00000465421 NCBP2LA6PVI3 153 aaKnown RBP5.01□□□□□ -1.61
SIK3-207ENST00000465421 IL4P05112 153 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms