RNA–Protein interactions for RNA: ENST00000464553.2

SSNA1-204, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSNA1, Length 723 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-204ENST00000464553 HMSDA8MTL9 139 aa11.42□□□□□ -0.58
SSNA1-204ENST00000464553 HMGB3O15347 200 aaKnown RBP11.42□□□□□ -0.58
SSNA1-204ENST00000464553 SPINK4O60575 86 aa11.42□□□□□ -0.58
SSNA1-204ENST00000464553 ZNF345Q14585 488 aa11.42□□□□□ -0.58
SSNA1-204ENST00000464553 TDRG1Q3Y452 100 aa11.42□□□□□ -0.58
SSNA1-204ENST00000464553 GOLT1AQ6ZVE7 132 aa11.42□□□□□ -0.58
SSNA1-204ENST00000464553 UBE2DNLQ8IWF7 75 aa11.42□□□□□ -0.58
SSNA1-204ENST00000464553 GSN-AS1Q9NRJ2 163 aa11.42□□□□□ -0.58
SSNA1-204ENST00000464553 KLF12Q9Y4X4 402 aa11.42□□□□□ -0.58
SSNA1-204ENST00000464553 CTXND1A0A1B0GTU2 59 aa11.41□□□□□ -0.58
SSNA1-204ENST00000464553 A0A1W2PRE2 83 aa11.41□□□□□ -0.58
SSNA1-204ENST00000464553 GAGE12BA1L429 117 aa11.41□□□□□ -0.58
SSNA1-204ENST00000464553 ARPC5O15511 151 aa11.41□□□□□ -0.58
SSNA1-204ENST00000464553 GAGE7O76087 117 aa11.41□□□□□ -0.58
SSNA1-204ENST00000464553 GAGE12FP0CL80 117 aa11.41□□□□□ -0.58
SSNA1-204ENST00000464553 GAGE12GP0CL81 117 aa11.41□□□□□ -0.58
SSNA1-204ENST00000464553 GAGE12IP0CL82 117 aa11.41□□□□□ -0.58
SSNA1-204ENST00000464553 PRR9Q5T870 116 aa11.41□□□□□ -0.58
SSNA1-204ENST00000464553 FAM159AQ6UWV7 190 aa11.41□□□□□ -0.58
SSNA1-204ENST00000464553 Q8TAT8 98 aa11.41□□□□□ -0.58
SSNA1-204ENST00000464553 ARPC5LQ9BPX5 153 aa11.41□□□□□ -0.58
SSNA1-204ENST00000464553 SPXQ9BT56 116 aa11.41□□□□□ -0.58
SSNA1-204ENST00000464553 TRGV2A0A075B6R0 118 aa11.4□□□□□ -0.58
SSNA1-204ENST00000464553 TCRAP04437 139 aa11.4□□□□□ -0.58
SSNA1-204ENST00000464553 ZNF415Q09FC8 603 aa11.4□□□□□ -0.58
SSNA1-204ENST00000464553 SLAQ13239 276 aa11.4□□□□□ -0.58
SSNA1-204ENST00000464553 AKR1C8PQ5T2L2 129 aa11.4□□□□□ -0.58
SSNA1-204ENST00000464553 Q6ZTI0 123 aa11.4□□□□□ -0.58
SSNA1-204ENST00000464553 LINC00336Q6ZUF6 198 aa11.4□□□□□ -0.58
SSNA1-204ENST00000464553 KCNRGQ8N5I3 272 aa11.4□□□□□ -0.58
SSNA1-204ENST00000464553 ATG101Q9BSB4 218 aa11.4□□□□□ -0.58
SSNA1-204ENST00000464553 NDFIP1Q9BT67 221 aa11.4□□□□□ -0.58
SSNA1-204ENST00000464553 CYTL1Q9NRR1 136 aa11.4□□□□□ -0.58
SSNA1-204ENST00000464553 TRGV11A0A075B6L2 103 aa11.39□□□□□ -0.59
SSNA1-204ENST00000464553 TRAV21A0A0B4J279 112 aa11.39□□□□□ -0.59
SSNA1-204ENST00000464553 A0A0D9SG52 128 aa11.39□□□□□ -0.59
SSNA1-204ENST00000464553 EIF3GO75821 320 aaKnown RBP eCLIP11.39□□□□□ -0.59
SSNA1-204ENST00000464553 CCL18P55774 89 aa11.39□□□□□ -0.59
SSNA1-204ENST00000464553 SUMO1P63165 101 aaKnown RBP11.39□□□□□ -0.59
SSNA1-204ENST00000464553 OR5I1Q13606 314 aa11.39□□□□□ -0.59
SSNA1-204ENST00000464553 KCNS1Q96KK3 526 aa11.39□□□□□ -0.59
SSNA1-204ENST00000464553 TREM1Q9NP99 234 aa11.39□□□□□ -0.59
SSNA1-204ENST00000464553 EPDR1Q9UM22 224 aa11.39□□□□□ -0.59
SSNA1-204ENST00000464553 TRGV1A0A0A0MS02 117 aa11.38□□□□□ -0.59
SSNA1-204ENST00000464553 NUDT3O95989 172 aa11.38□□□□□ -0.59
SSNA1-204ENST00000464553 TRAV26-1A0A087WT03 109 aa11.37□□□□□ -0.59
SSNA1-204ENST00000464553 EIF5AP63241 154 aaKnown RBP11.37□□□□□ -0.59
SSNA1-204ENST00000464553 SAPCD1Q5SSQ6 148 aa11.37□□□□□ -0.59
SSNA1-204ENST00000464553 RPH3ALQ9UNE2 315 aa11.37□□□□□ -0.59
SSNA1-204ENST00000464553 UMAD1C9J7I0 102 aa11.36□□□□□ -0.59
SSNA1-204ENST00000464553 SEC11BP0C7V7 166 aa11.36□□□□□ -0.59
SSNA1-204ENST00000464553 HOXA5P20719 270 aa11.36□□□□□ -0.59
SSNA1-204ENST00000464553 ZNF726P1Q15940 193 aa11.36□□□□□ -0.59
SSNA1-204ENST00000464553 Q6ZQT7 251 aa11.36□□□□□ -0.59
SSNA1-204ENST00000464553 Q6ZR54 194 aa11.36□□□□□ -0.59
SSNA1-204ENST00000464553 CYB561D1Q8N8Q1 229 aa11.36□□□□□ -0.59
SSNA1-204ENST00000464553 TMEM75Q8N9X5 138 aa11.36□□□□□ -0.59
SSNA1-204ENST00000464553 STOML3Q8TAV4 291 aa11.36□□□□□ -0.59
SSNA1-204ENST00000464553 RASL10AQ92737 203 aa11.36□□□□□ -0.59
SSNA1-204ENST00000464553 TVP23CQ96ET8 276 aa11.36□□□□□ -0.59
SSNA1-204ENST00000464553 TMPRSS5Q9H3S3 457 aa11.36□□□□□ -0.59
SSNA1-204ENST00000464553 TRAV8-1A0A0A6YYK1 113 aa11.35□□□□□ -0.59
SSNA1-204ENST00000464553 GGTLC3B5MD39 225 aa11.35□□□□□ -0.59
SSNA1-204ENST00000464553 PPT1P50897 306 aa11.35□□□□□ -0.59
SSNA1-204ENST00000464553 GNG5P63218 68 aa11.35□□□□□ -0.59
SSNA1-204ENST00000464553 FLI1Q01543 452 aaPredicted RBP11.35□□□□□ -0.59
SSNA1-204ENST00000464553 MUC21Q5SSG8 566 aa11.35□□□□□ -0.59
SSNA1-204ENST00000464553 SSX7Q7RTT5 188 aa11.35□□□□□ -0.59
SSNA1-204ENST00000464553 IQCF2Q8IXL9 164 aa11.35□□□□□ -0.59
SSNA1-204ENST00000464553 HIST1H2BAQ96A08 127 aa11.35□□□□□ -0.59
SSNA1-204ENST00000464553 TCEAL7Q9BRU2 100 aa11.35□□□□□ -0.59
SSNA1-204ENST00000464553 PSG8Q9UQ74 426 aa11.35□□□□□ -0.59
SSNA1-204ENST00000464553 IGLV2-11P01706 119 aa11.34□□□□□ -0.59
SSNA1-204ENST00000464553 FHITP49789 147 aa11.34□□□□□ -0.59
SSNA1-204ENST00000464553 TMEM183BQ1AE95 376 aa11.34□□□□□ -0.59
SSNA1-204ENST00000464553 TMEM183AQ8IXX5 376 aa11.34□□□□□ -0.59
SSNA1-204ENST00000464553 MDFICQ9P1T7 246 aa11.34□□□□□ -0.59
SSNA1-204ENST00000464553 PRO0255Q9UI72 69 aa11.34□□□□□ -0.59
SSNA1-204ENST00000464553 ARL2-SNX15V9GYD0 113 aa11.34□□□□□ -0.59
SSNA1-204ENST00000464553 KANTRA0A1W2PQU2 76 aa11.33□□□□□ -0.6
SSNA1-204ENST00000464553 F6UZH7 168 aa11.33□□□□□ -0.6
SSNA1-204ENST00000464553 ZFP69Q49AA0 526 aa11.33□□□□□ -0.6
SSNA1-204ENST00000464553 SMUG1Q53HV7 270 aa11.33□□□□□ -0.6
SSNA1-204ENST00000464553 SOHLH1Q5JUK2 328 aa11.33□□□□□ -0.6
SSNA1-204ENST00000464553 DPPA3Q6W0C5 159 aa11.33□□□□□ -0.6
SSNA1-204ENST00000464553 OR11H4Q8NGC9 324 aa11.33□□□□□ -0.6
SSNA1-204ENST00000464553 SDF2L1Q9HCN8 221 aa11.33□□□□□ -0.6
SSNA1-204ENST00000464553 MAP1LC3B2A6NCE7 125 aa11.32□□□□□ -0.6
SSNA1-204ENST00000464553 SMLR1H3BR10 107 aa11.32□□□□□ -0.6
SSNA1-204ENST00000464553 M0R2P5 195 aa11.32□□□□□ -0.6
SSNA1-204ENST00000464553 IFNA7P01567 189 aa11.32□□□□□ -0.6
SSNA1-204ENST00000464553 PFN1P07737 140 aaKnown RBP11.32□□□□□ -0.6
SSNA1-204ENST00000464553 ZNRF2Q8NHG8 242 aa11.32□□□□□ -0.6
SSNA1-204ENST00000464553 VSIG2Q96IQ7 327 aa11.32□□□□□ -0.6
SSNA1-204ENST00000464553 MAP1LC3BQ9GZQ8 125 aa11.32□□□□□ -0.6
SSNA1-204ENST00000464553 MRPL16Q9NX20 251 aaKnown RBP11.32□□□□□ -0.6
SSNA1-204ENST00000464553 HHLA3Q9XRX5 114 aa11.32□□□□□ -0.6
SSNA1-204ENST00000464553 LINC00588Q9Y4M8 146 aa11.32□□□□□ -0.6
SSNA1-204ENST00000464553 KMT2AQ03164 3969 aa11.32□□□□□ -0.6
SSNA1-204ENST00000464553 VPS13DQ5THJ4 4388 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms