RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 GATD1Q8NB37 220 aa11.07□□□□□ -0.64
COL5A1-205ENST00000464187 LINC01006Q8NI28 216 aa11.07□□□□□ -0.64
COL5A1-205ENST00000464187 METTL26Q96S19 204 aa11.07□□□□□ -0.64
COL5A1-205ENST00000464187 C16orf95Q9H693 158 aa11.07□□□□□ -0.64
COL5A1-205ENST00000464187 PEF1Q9UBV8 284 aaKnown RBP11.07□□□□□ -0.64
COL5A1-205ENST00000464187 LOC102724200A0A096LPH7 203 aaPredicted RBP11.07□□□□□ -0.64
COL5A1-205ENST00000464187 NTF3P20783 257 aa11.07□□□□□ -0.64
COL5A1-205ENST00000464187 SAPCD1Q5SSQ6 148 aa11.07□□□□□ -0.64
COL5A1-205ENST00000464187 FAM162BQ5T6X4 162 aa11.07□□□□□ -0.64
COL5A1-205ENST00000464187 URB1-AS1Q96HZ7 61 aa11.07□□□□□ -0.64
COL5A1-205ENST00000464187 UBE2E2Q96LR5 201 aa11.07□□□□□ -0.64
COL5A1-205ENST00000464187 U3KQE9 123 aa11.07□□□□□ -0.64
COL5A1-205ENST00000464187 IGHV3-49A0A0A0MS15 119 aa11.06□□□□□ -0.64
COL5A1-205ENST00000464187 PRAC2D3DTV9 90 aa11.06□□□□□ -0.64
COL5A1-205ENST00000464187 RIGQ13278 110 aa11.06□□□□□ -0.64
COL5A1-205ENST00000464187 Q6AWC8 147 aa11.06□□□□□ -0.64
COL5A1-205ENST00000464187 RNASEKQ6P5S7 137 aaKnown RBP11.06□□□□□ -0.64
COL5A1-205ENST00000464187 RNF182Q8N6D2 247 aa11.06□□□□□ -0.64
COL5A1-205ENST00000464187 SLC50A1Q9BRV3 221 aa11.06□□□□□ -0.64
COL5A1-205ENST00000464187 TMEM189A5PLL7 270 aa11.05□□□□□ -0.64
COL5A1-205ENST00000464187 HSBP1O75506 76 aa11.05□□□□□ -0.64
COL5A1-205ENST00000464187 ZNF80P51504 273 aaPredicted RBP11.05□□□□□ -0.64
COL5A1-205ENST00000464187 TDRG1Q3Y452 100 aa11.05□□□□□ -0.64
COL5A1-205ENST00000464187 TCTEX1D4Q5JR98 221 aa11.05□□□□□ -0.64
COL5A1-205ENST00000464187 NDUFAF3Q9BU61 184 aa11.05□□□□□ -0.64
COL5A1-205ENST00000464187 TMSB15BA0A087X1C1 80 aa11.05□□□□□ -0.64
COL5A1-205ENST00000464187 NDUFA4O00483 81 aa11.05□□□□□ -0.64
COL5A1-205ENST00000464187 LGALS1P09382 135 aaKnown RBP11.05□□□□□ -0.64
COL5A1-205ENST00000464187 C3orf79P0CE67 100 aa11.05□□□□□ -0.64
COL5A1-205ENST00000464187 SRSF2Q01130 221 aaKnown RBP11.05□□□□□ -0.64
COL5A1-205ENST00000464187 ERCC8Q13216 396 aa11.05□□□□□ -0.64
COL5A1-205ENST00000464187 NDFIP1Q9BT67 221 aa11.05□□□□□ -0.64
COL5A1-205ENST00000464187 TPPP3Q9BW30 176 aa11.05□□□□□ -0.64
COL5A1-205ENST00000464187 TRAV8-2A0A0B4J237 113 aa11.04□□□□□ -0.64
COL5A1-205ENST00000464187 M0QZ24 198 aa11.04□□□□□ -0.64
COL5A1-205ENST00000464187 UNQ9165/PRO28630Q6UXU0 137 aa11.04□□□□□ -0.64
COL5A1-205ENST00000464187 A0A1B0GW15 77 aa11.03□□□□□ -0.64
COL5A1-205ENST00000464187 RBAKDNA6NC62 111 aa11.03□□□□□ -0.64
COL5A1-205ENST00000464187 M0R2Z0 102 aa11.03□□□□□ -0.64
COL5A1-205ENST00000464187 NDUFA7O95182 113 aa11.03□□□□□ -0.64
COL5A1-205ENST00000464187 LYZL1Q6UWQ5 148 aa11.03□□□□□ -0.64
COL5A1-205ENST00000464187 KHDC1LQ5JSQ8 128 aa11.02□□□□□ -0.64
COL5A1-205ENST00000464187 C18orf65Q6ZTR6 163 aa11.02□□□□□ -0.64
COL5A1-205ENST00000464187 C8orf86Q6ZUL3 223 aa11.02□□□□□ -0.64
COL5A1-205ENST00000464187 BORCS7Q96B45 105 aa11.02□□□□□ -0.64
COL5A1-205ENST00000464187 GLMPQ8WWB7 406 aa11.02□□□□□ -0.65
COL5A1-205ENST00000464187 VAMP8Q9BV40 100 aa11.02□□□□□ -0.65
COL5A1-205ENST00000464187 IGHV4OR15-8A0A075B7B6 117 aa11.01□□□□□ -0.65
COL5A1-205ENST00000464187 A0A087WW49 117 aa11.01□□□□□ -0.65
COL5A1-205ENST00000464187 BMI1P35226 326 aa11.01□□□□□ -0.65
COL5A1-205ENST00000464187 HIST2H2BDQ6DRA6 164 aa11.01□□□□□ -0.65
COL5A1-205ENST00000464187 ZNF493Q6ZR52 646 aa11.01□□□□□ -0.65
COL5A1-205ENST00000464187 ZNF575Q86XF7 245 aa11.01□□□□□ -0.65
COL5A1-205ENST00000464187 C11orf44Q8N8P7 122 aa11.01□□□□□ -0.65
COL5A1-205ENST00000464187 CHCHD1Q96BP2 118 aaKnown RBP11.01□□□□□ -0.65
COL5A1-205ENST00000464187 MRPL53Q96EL3 112 aaKnown RBP11.01□□□□□ -0.65
COL5A1-205ENST00000464187 C20orf144Q9BQM9 153 aa11.01□□□□□ -0.65
COL5A1-205ENST00000464187 PAM16Q9Y3D7 125 aa11.01□□□□□ -0.65
COL5A1-205ENST00000464187 TMEM213A2RRL7 107 aa11□□□□□ -0.65
COL5A1-205ENST00000464187 CTRLP40313 264 aa11□□□□□ -0.65
COL5A1-205ENST00000464187 RPS20P60866 119 aaKnown RBP11□□□□□ -0.65
COL5A1-205ENST00000464187 FAM106AQ4KMX7 169 aa11□□□□□ -0.65
COL5A1-205ENST00000464187 EBLN2Q6P2I7 272 aa11□□□□□ -0.65
COL5A1-205ENST00000464187 GPHB5Q86YW7 130 aa11□□□□□ -0.65
COL5A1-205ENST00000464187 SETD2Q9BYW2 2564 aaPredicted RBP11□□□□□ -0.65
COL5A1-205ENST00000464187 IGHV1-24A0A0C4DH33 117 aa11□□□□□ -0.65
COL5A1-205ENST00000464187 IGLC6P0CF74 106 aa11□□□□□ -0.65
COL5A1-205ENST00000464187 CD28P10747 220 aa11□□□□□ -0.65
COL5A1-205ENST00000464187 PMCHL1Q16048 86 aa11□□□□□ -0.65
COL5A1-205ENST00000464187 DEFB136Q30KP8 78 aa11□□□□□ -0.65
COL5A1-205ENST00000464187 C4orf3Q8WVX3 66 aa11□□□□□ -0.65
COL5A1-205ENST00000464187 C2orf70A6NJV1 201 aa10.99□□□□□ -0.65
COL5A1-205ENST00000464187 PROK1P58294 105 aa10.99□□□□□ -0.65
COL5A1-205ENST00000464187 FER1L6-AS1Q8NA97 138 aa10.99□□□□□ -0.65
COL5A1-205ENST00000464187 KLHL30-AS1Q8NEE0 82 aa10.99□□□□□ -0.65
COL5A1-205ENST00000464187 AGPAT4-IT1Q9H0P7 198 aa10.99□□□□□ -0.65
COL5A1-205ENST00000464187 CLEC5AQ9NY25 188 aa10.99□□□□□ -0.65
COL5A1-205ENST00000464187 FABP5P3A8MUU1 101 aa10.98□□□□□ -0.65
COL5A1-205ENST00000464187 LINC00614P0C842 121 aa10.98□□□□□ -0.65
COL5A1-205ENST00000464187 HOXD3P31249 432 aaPredicted RBP10.98□□□□□ -0.65
COL5A1-205ENST00000464187 OR11H1Q8NG94 326 aa10.98□□□□□ -0.65
COL5A1-205ENST00000464187 WFDC12Q8WWY7 111 aa10.98□□□□□ -0.65
COL5A1-205ENST00000464187 DAZ1Q9NQZ3 744 aaKnown RBP10.98□□□□□ -0.65
COL5A1-205ENST00000464187 NIPBLQ6KC79 2804 aaeCLIP10.98□□□□□ -0.65
COL5A1-205ENST00000464187 C2CD3Q4AC94 2353 aa10.98□□□□□ -0.65
COL5A1-205ENST00000464187 MUC21A0A0G2JKD1 596 aa10.98□□□□□ -0.65
COL5A1-205ENST00000464187 MUC21A0A140T8X8 626 aa10.98□□□□□ -0.65
COL5A1-205ENST00000464187 ZNF138P52744 262 aa10.98□□□□□ -0.65
COL5A1-205ENST00000464187 SSTP61278 116 aa10.98□□□□□ -0.65
COL5A1-205ENST00000464187 TM4SF20Q53R12 229 aa10.98□□□□□ -0.65
COL5A1-205ENST00000464187 MUC21Q5SSG8 566 aa10.98□□□□□ -0.65
COL5A1-205ENST00000464187 C16orf92Q96LL3 132 aa10.98□□□□□ -0.65
COL5A1-205ENST00000464187 CITED2Q99967 270 aaPredicted RBP10.98□□□□□ -0.65
COL5A1-205ENST00000464187 ORM1P02763 201 aa10.97□□□□□ -0.65
COL5A1-205ENST00000464187 BTF3P20290 206 aaKnown RBP10.97□□□□□ -0.65
COL5A1-205ENST00000464187 LINC01559Q495D7 138 aa10.97□□□□□ -0.65
COL5A1-205ENST00000464187 DMRTA1Q5VZB9 504 aa10.97□□□□□ -0.65
COL5A1-205ENST00000464187 C9orf47Q6ZRZ4 202 aa10.97□□□□□ -0.65
COL5A1-205ENST00000464187 C20orf173Q96LM9 149 aa10.97□□□□□ -0.65
COL5A1-205ENST00000464187 LINC01619G3V211 115 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms