RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 ZNF266Q14584 549 aa9.9□□□□□ -0.82
SNRNP40-203ENST00000463988 ARPC5LQ9BPX5 153 aa9.9□□□□□ -0.82
SNRNP40-203ENST00000463988 HSPB11Q9Y547 144 aa9.9□□□□□ -0.82
SNRNP40-203ENST00000463988 LENEPQ9Y5L5 61 aa9.9□□□□□ -0.82
SNRNP40-203ENST00000463988 A6NHS1 94 aa9.89□□□□□ -0.83
SNRNP40-203ENST00000463988 PAX4O43316 350 aa9.89□□□□□ -0.83
SNRNP40-203ENST00000463988 MPC2O95563 127 aa9.89□□□□□ -0.83
SNRNP40-203ENST00000463988 TAS2R45P59539 299 aa9.89□□□□□ -0.83
SNRNP40-203ENST00000463988 RANP62826 216 aaKnown RBP9.89□□□□□ -0.83
SNRNP40-203ENST00000463988 PTTG2Q9NZH5 202 aa9.89□□□□□ -0.83
SNRNP40-203ENST00000463988 PRO0255Q9UI72 69 aa9.89□□□□□ -0.83
SNRNP40-203ENST00000463988 TP53TG3Q9ULZ0 132 aa9.89□□□□□ -0.83
SNRNP40-203ENST00000463988 SSNA1O43805 119 aa9.88□□□□□ -0.83
SNRNP40-203ENST00000463988 IFNA5P01569 189 aa9.88□□□□□ -0.83
SNRNP40-203ENST00000463988 UBE2L3P68036 154 aaKnown RBP9.88□□□□□ -0.83
SNRNP40-203ENST00000463988 ZNF415Q09FC8 603 aa9.88□□□□□ -0.83
SNRNP40-203ENST00000463988 KHDC3LQ587J8 217 aa9.88□□□□□ -0.83
SNRNP40-203ENST00000463988 FFAR4Q5NUL3 377 aa9.88□□□□□ -0.83
SNRNP40-203ENST00000463988 Q6ZQT7 251 aa9.88□□□□□ -0.83
SNRNP40-203ENST00000463988 Q8TAT8 98 aa9.88□□□□□ -0.83
SNRNP40-203ENST00000463988 SCGB1C1Q8TD33 95 aa9.88□□□□□ -0.83
SNRNP40-203ENST00000463988 TMED6Q8WW62 240 aa9.88□□□□□ -0.83
SNRNP40-203ENST00000463988 ICOSQ9Y6W8 199 aa9.88□□□□□ -0.83
SNRNP40-203ENST00000463988 HSPG2P98160 4391 aa9.87□□□□□ -0.83
SNRNP40-203ENST00000463988 DIRC3C9JPN6 131 aa9.87□□□□□ -0.83
SNRNP40-203ENST00000463988 SIVA1O15304 175 aa9.87□□□□□ -0.83
SNRNP40-203ENST00000463988 RPL12P30050 165 aaKnown RBP9.87□□□□□ -0.83
SNRNP40-203ENST00000463988 DEFA1P59665 94 aa9.87□□□□□ -0.83
SNRNP40-203ENST00000463988 DEFA3P59666 94 aa9.87□□□□□ -0.83
SNRNP40-203ENST00000463988 Q6AWC8 147 aa9.87□□□□□ -0.83
SNRNP40-203ENST00000463988 MRPL16Q9NX20 251 aaKnown RBP9.87□□□□□ -0.83
SNRNP40-203ENST00000463988 DNAH5Q8TE73 4624 aa9.87□□□□□ -0.83
SNRNP40-203ENST00000463988 CRYBA4P53673 196 aa9.86□□□□□ -0.83
SNRNP40-203ENST00000463988 FHL2Q14192 279 aa9.86□□□□□ -0.83
SNRNP40-203ENST00000463988 SPATA12Q7Z6I5 190 aa9.86□□□□□ -0.83
SNRNP40-203ENST00000463988 IQCF2Q8IXL9 164 aa9.86□□□□□ -0.83
SNRNP40-203ENST00000463988 ARL6IP6Q8N6S5 226 aa9.86□□□□□ -0.83
SNRNP40-203ENST00000463988 SPXQ9BT56 116 aa9.86□□□□□ -0.83
SNRNP40-203ENST00000463988 OTORQ9NRC9 128 aa9.86□□□□□ -0.83
SNRNP40-203ENST00000463988 HHLA3Q9XRX5 114 aa9.86□□□□□ -0.83
SNRNP40-203ENST00000463988 IGHV3-53P01767 116 aa9.85□□□□□ -0.83
SNRNP40-203ENST00000463988 MRPL23Q16540 153 aaKnown RBP9.85□□□□□ -0.83
SNRNP40-203ENST00000463988 TDRG1Q3Y452 100 aa9.85□□□□□ -0.83
SNRNP40-203ENST00000463988 RASL10AQ92737 203 aa9.85□□□□□ -0.83
SNRNP40-203ENST00000463988 MBD2Q9UBB5 411 aa9.85□□□□□ -0.83
SNRNP40-203ENST00000463988 TRGV11A0A075B6L2 103 aa9.84□□□□□ -0.83
SNRNP40-203ENST00000463988 NXPH4O95158 308 aa9.84□□□□□ -0.83
SNRNP40-203ENST00000463988 LINC00315P59091 139 aa9.84□□□□□ -0.83
SNRNP40-203ENST00000463988 ACOT6Q3I5F7 207 aaPredicted RBP9.84□□□□□ -0.83
SNRNP40-203ENST00000463988 FAM74A1Q5RGS3 127 aa9.84□□□□□ -0.83
SNRNP40-203ENST00000463988 MUC21Q5SSG8 566 aa9.84□□□□□ -0.83
SNRNP40-203ENST00000463988 FAM159AQ6UWV7 190 aa9.84□□□□□ -0.83
SNRNP40-203ENST00000463988 PQLC2Q6ZP29 291 aa9.84□□□□□ -0.83
SNRNP40-203ENST00000463988 OR10G4Q8NGN3 311 aa9.84□□□□□ -0.83
SNRNP40-203ENST00000463988 C8orf49Q96NF6 230 aa9.84□□□□□ -0.83
SNRNP40-203ENST00000463988 KRTAP4-5Q9BYR2 181 aa9.84□□□□□ -0.83
SNRNP40-203ENST00000463988 SMIM3Q9BZL3 60 aa9.84□□□□□ -0.83
SNRNP40-203ENST00000463988 MDFICQ9P1T7 246 aa9.84□□□□□ -0.83
SNRNP40-203ENST00000463988 TMEM183BQ1AE95 376 aa9.83□□□□□ -0.84
SNRNP40-203ENST00000463988 LYPD5Q6UWN5 251 aa9.83□□□□□ -0.84
SNRNP40-203ENST00000463988 Q6ZRN7 208 aaPredicted RBP9.83□□□□□ -0.84
SNRNP40-203ENST00000463988 NEGR1Q7Z3B1 354 aa9.83□□□□□ -0.84
SNRNP40-203ENST00000463988 TMEM183AQ8IXX5 376 aa9.83□□□□□ -0.84
SNRNP40-203ENST00000463988 CMTM2Q8TAZ6 248 aa9.83□□□□□ -0.84
SNRNP40-203ENST00000463988 WFDC1Q9HC57 220 aa9.83□□□□□ -0.84
SNRNP40-203ENST00000463988 TRGV4A0A0C4DH28 118 aa9.82□□□□□ -0.84
SNRNP40-203ENST00000463988 A0A1W2PPV4 95 aa9.82□□□□□ -0.84
SNRNP40-203ENST00000463988 PGPA6NDG6 321 aa9.82□□□□□ -0.84
SNRNP40-203ENST00000463988 KRTAP10-2P60368 255 aa9.82□□□□□ -0.84
SNRNP40-203ENST00000463988 HYLS1Q96M11 299 aa9.82□□□□□ -0.84
SNRNP40-203ENST00000463988 APOBP04114 4563 aaKnown RBP9.82□□□□□ -0.84
SNRNP40-203ENST00000463988 K7EP13 123 aa9.81□□□□□ -0.84
SNRNP40-203ENST00000463988 ORM1P02763 201 aa9.81□□□□□ -0.84
SNRNP40-203ENST00000463988 MAPKAPK5-AS1Q8N8E1 139 aa9.81□□□□□ -0.84
SNRNP40-203ENST00000463988 TRAV9-2A0A087WT02 112 aa9.8□□□□□ -0.84
SNRNP40-203ENST00000463988 TRAV21A0A0B4J279 112 aa9.8□□□□□ -0.84
SNRNP40-203ENST00000463988 K7EQD1 137 aa9.8□□□□□ -0.84
SNRNP40-203ENST00000463988 SRIP30626 198 aa9.8□□□□□ -0.84
SNRNP40-203ENST00000463988 GOLT1AQ6ZVE7 132 aa9.8□□□□□ -0.84
SNRNP40-203ENST00000463988 NFE4Q86UQ8 179 aa9.8□□□□□ -0.84
SNRNP40-203ENST00000463988 ZNF479Q96JC4 524 aa9.8□□□□□ -0.84
SNRNP40-203ENST00000463988 TRAV4A0A0B4J268 109 aa9.79□□□□□ -0.84
SNRNP40-203ENST00000463988 IGHV3-16A0A0C4DH30 117 aa9.79□□□□□ -0.84
SNRNP40-203ENST00000463988 SERTM2A0A1B0GWG4 89 aa9.79□□□□□ -0.84
SNRNP40-203ENST00000463988 M0R2P5 195 aa9.79□□□□□ -0.84
SNRNP40-203ENST00000463988 EIF3GO75821 320 aaKnown RBP eCLIP9.79□□□□□ -0.84
SNRNP40-203ENST00000463988 SFTA3P0C7M3 94 aa9.79□□□□□ -0.84
SNRNP40-203ENST00000463988 RAB2AP61019 212 aa9.79□□□□□ -0.84
SNRNP40-203ENST00000463988 Q8N1X5 172 aa9.79□□□□□ -0.84
SNRNP40-203ENST00000463988 OR10G9Q8NGN4 311 aa9.79□□□□□ -0.84
SNRNP40-203ENST00000463988 OR10G7Q8NGN6 311 aa9.79□□□□□ -0.84
SNRNP40-203ENST00000463988 OR2G3Q8NGZ4 309 aa9.79□□□□□ -0.84
SNRNP40-203ENST00000463988 PCNPQ8WW12 178 aaKnown RBP9.79□□□□□ -0.84
SNRNP40-203ENST00000463988 KCNS1Q96KK3 526 aa9.79□□□□□ -0.84
SNRNP40-203ENST00000463988 PGPEP1Q9NXJ5 209 aa9.79□□□□□ -0.84
SNRNP40-203ENST00000463988 EREGO14944 169 aa9.78□□□□□ -0.84
SNRNP40-203ENST00000463988 GNRH2O43555 120 aa9.78□□□□□ -0.84
SNRNP40-203ENST00000463988 GYPEP15421 78 aa9.78□□□□□ -0.84
SNRNP40-203ENST00000463988 TVP23CQ96ET8 276 aa9.78□□□□□ -0.84
SNRNP40-203ENST00000463988 TXNDC17Q9BRA2 123 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms