RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 NCOR2Q9Y618 2525 aa2.81□□□□□ -1.96
COL8A1-205ENST00000463753 A0A0U1RRA0 63 aa2.81□□□□□ -1.96
COL8A1-205ENST00000463753 LINC00473A8K010 186 aa2.81□□□□□ -1.96
COL8A1-205ENST00000463753 FAM90A23PA8MXZ1 464 aa2.81□□□□□ -1.96
COL8A1-205ENST00000463753 CLPSP04118 112 aa2.81□□□□□ -1.96
COL8A1-205ENST00000463753 FAM90A15PP0C7V4 464 aa2.81□□□□□ -1.96
COL8A1-205ENST00000463753 FAM90A13PP0C7W8 464 aa2.81□□□□□ -1.96
COL8A1-205ENST00000463753 FAM90A14PP0C7W9 464 aa2.81□□□□□ -1.96
COL8A1-205ENST00000463753 COX6A1P12074 109 aa2.81□□□□□ -1.96
COL8A1-205ENST00000463753 PRDX2P32119 198 aa2.81□□□□□ -1.96
COL8A1-205ENST00000463753 RPL13AP40429 203 aaKnown RBP2.81□□□□□ -1.96
COL8A1-205ENST00000463753 BRWD1-AS2P59051 145 aa2.81□□□□□ -1.96
COL8A1-205ENST00000463753 KRTAP5-3Q6L8H2 238 aa2.81□□□□□ -1.96
COL8A1-205ENST00000463753 C11orf53Q8IXP5 236 aa2.81□□□□□ -1.96
COL8A1-205ENST00000463753 MRPL20Q9BYC9 149 aaKnown RBP2.81□□□□□ -1.96
COL8A1-205ENST00000463753 KLK15Q9H2R5 256 aa2.81□□□□□ -1.96
COL8A1-205ENST00000463753 FSCN3Q9NQT6 498 aa2.81□□□□□ -1.96
COL8A1-205ENST00000463753 ZNF492Q9P255 531 aa2.81□□□□□ -1.96
COL8A1-205ENST00000463753 FOXA2Q9Y261 457 aaPredicted RBP2.81□□□□□ -1.96
COL8A1-205ENST00000463753 C5orf42Q9H799 3197 aa2.8□□□□□ -1.96
COL8A1-205ENST00000463753 ABCA2Q9BZC7 2435 aa2.8□□□□□ -1.96
COL8A1-205ENST00000463753 TRBV7-7A0A0K0K1E9 115 aa2.8□□□□□ -1.96
COL8A1-205ENST00000463753 ELANEP08246 267 aa2.8□□□□□ -1.96
COL8A1-205ENST00000463753 P0C879 139 aa2.8□□□□□ -1.96
COL8A1-205ENST00000463753 TMEM258P61165 79 aa2.8□□□□□ -1.96
COL8A1-205ENST00000463753 CDSNQ15517 529 aa2.8□□□□□ -1.96
COL8A1-205ENST00000463753 MRPL51Q4U2R6 128 aaKnown RBP2.8□□□□□ -1.96
COL8A1-205ENST00000463753 SLC25A48Q6ZT89 311 aaKnown RBP2.8□□□□□ -1.96
COL8A1-205ENST00000463753 DTX2Q86UW9 622 aa2.8□□□□□ -1.96
COL8A1-205ENST00000463753 PATE1Q8WXA2 126 aa2.8□□□□□ -1.96
COL8A1-205ENST00000463753 PRSS22Q9GZN4 317 aa2.8□□□□□ -1.96
COL8A1-205ENST00000463753 GFRA4Q9GZZ7 299 aa2.8□□□□□ -1.96
COL8A1-205ENST00000463753 PHPT1Q9NRX4 125 aaPredicted RBP2.8□□□□□ -1.96
COL8A1-205ENST00000463753 IGKV1OR2-108A0A075B7D4 117 aa2.8□□□□□ -1.96
COL8A1-205ENST00000463753 TRAV17A0A0B4J275 112 aa2.8□□□□□ -1.96
COL8A1-205ENST00000463753 PRSS46E5RG02 174 aa2.8□□□□□ -1.96
COL8A1-205ENST00000463753 ZNF561-AS1K7EIQ3 104 aa2.8□□□□□ -1.96
COL8A1-205ENST00000463753 SPRY2O43597 315 aa2.8□□□□□ -1.96
COL8A1-205ENST00000463753 CRYGAP11844 174 aa2.8□□□□□ -1.96
COL8A1-205ENST00000463753 UBE2D1P51668 147 aa2.8□□□□□ -1.96
COL8A1-205ENST00000463753 LOXL3P58215 753 aa2.8□□□□□ -1.96
COL8A1-205ENST00000463753 ATXN8Q156A1 80 aa2.8□□□□□ -1.96
COL8A1-205ENST00000463753 LINC01620Q4KN68 170 aa2.8□□□□□ -1.96
COL8A1-205ENST00000463753 CT83Q5H943 113 aa2.8□□□□□ -1.96
COL8A1-205ENST00000463753 PSMG4Q5JS54 123 aa2.8□□□□□ -1.96
COL8A1-205ENST00000463753 Q6ZT83 130 aa2.8□□□□□ -1.96
COL8A1-205ENST00000463753 RPS19BP1Q86WX3 136 aaKnown RBP2.8□□□□□ -1.96
COL8A1-205ENST00000463753 LINC01561Q8N1V8 128 aa2.8□□□□□ -1.96
COL8A1-205ENST00000463753 KLHL30-AS1Q8NEE0 82 aa2.8□□□□□ -1.96
COL8A1-205ENST00000463753 PIFOQ8TCI5 191 aa2.8□□□□□ -1.96
COL8A1-205ENST00000463753 BMFQ96LC9 184 aa2.8□□□□□ -1.96
COL8A1-205ENST00000463753 DSCAML1Q8TD84 2053 aa2.8□□□□□ -1.96
COL8A1-205ENST00000463753 ZNF785A8K8V0 405 aa2.79□□□□□ -1.96
COL8A1-205ENST00000463753 H7C1H1 209 aa2.79□□□□□ -1.96
COL8A1-205ENST00000463753 WNT9BO14905 357 aa2.79□□□□□ -1.96
COL8A1-205ENST00000463753 GAS8-AS1O95177 125 aa2.79□□□□□ -1.96
COL8A1-205ENST00000463753 CFC1BP0CG36 223 aa2.79□□□□□ -1.96
COL8A1-205ENST00000463753 CFC1P0CG37 223 aa2.79□□□□□ -1.96
COL8A1-205ENST00000463753 EBI3Q14213 229 aa2.79□□□□□ -1.96
COL8A1-205ENST00000463753 C10orf113Q5VZT2 155 aa2.79□□□□□ -1.96
COL8A1-205ENST00000463753 GOLT1AQ6ZVE7 132 aa2.79□□□□□ -1.96
COL8A1-205ENST00000463753 AAED1Q7RTV5 226 aa2.79□□□□□ -1.96
COL8A1-205ENST00000463753 LINC00311Q8N616 119 aa2.79□□□□□ -1.96
COL8A1-205ENST00000463753 Q8NA96 180 aa2.79□□□□□ -1.96
COL8A1-205ENST00000463753 FAM167A-AS1Q96KT0 104 aa2.79□□□□□ -1.96
COL8A1-205ENST00000463753 C9orf85Q96MD7 179 aa2.79□□□□□ -1.96
COL8A1-205ENST00000463753 ZMAT4Q9H898 229 aa2.79□□□□□ -1.96
COL8A1-205ENST00000463753 PRO1854Q9UHT4 67 aa2.79□□□□□ -1.96
COL8A1-205ENST00000463753 TENM4Q6N022 2769 aa2.79□□□□□ -1.96
COL8A1-205ENST00000463753 PI4KAP42356 2102 aa2.79□□□□□ -1.96
COL8A1-205ENST00000463753 FAM90A7PA6NKC0 464 aa2.79□□□□□ -1.96
COL8A1-205ENST00000463753 SRRM4A7MD48 611 aaKnown RBP2.79□□□□□ -1.96
COL8A1-205ENST00000463753 FAM90A22PA8MWA6 464 aa2.79□□□□□ -1.96
COL8A1-205ENST00000463753 FAM90A12PA8MX19 464 aa2.79□□□□□ -1.96
COL8A1-205ENST00000463753 SHISA9B4DS77 424 aa2.79□□□□□ -1.96
COL8A1-205ENST00000463753 EFNA2O43921 213 aa2.79□□□□□ -1.96
COL8A1-205ENST00000463753 ZNF32P17041 273 aa2.79□□□□□ -1.96
COL8A1-205ENST00000463753 FAM104BQ5XKR9 115 aa2.79□□□□□ -1.96
COL8A1-205ENST00000463753 LYZL1Q6UWQ5 148 aa2.79□□□□□ -1.96
COL8A1-205ENST00000463753 IGFL3Q6UXB1 125 aa2.79□□□□□ -1.96
COL8A1-205ENST00000463753 FLVCR1-AS1Q8TAF5 88 aa2.79□□□□□ -1.96
COL8A1-205ENST00000463753 C16orf92Q96LL3 132 aa2.79□□□□□ -1.96
COL8A1-205ENST00000463753 C17orf77Q96MU5 243 aa2.79□□□□□ -1.96
COL8A1-205ENST00000463753 FGF23Q9GZV9 251 aaPredicted RBP2.79□□□□□ -1.96
COL8A1-205ENST00000463753 CTSZQ9UBR2 303 aa2.79□□□□□ -1.96
COL8A1-205ENST00000463753 CPAMD8Q8IZJ3 1885 aa2.79□□□□□ -1.96
COL8A1-205ENST00000463753 TMEM131Q92545 1883 aa2.79□□□□□ -1.96
COL8A1-205ENST00000463753 CCL21O00585 134 aa2.79□□□□□ -1.96
COL8A1-205ENST00000463753 NBR2O15453 112 aa2.79□□□□□ -1.96
COL8A1-205ENST00000463753 IGHG3P01860 377 aa2.79□□□□□ -1.96
COL8A1-205ENST00000463753 COX6B1P14854 86 aa2.79□□□□□ -1.96
COL8A1-205ENST00000463753 GATA1P15976 413 aaPredicted RBP2.79□□□□□ -1.96
COL8A1-205ENST00000463753 FKBP2P26885 142 aaKnown RBP2.79□□□□□ -1.96
COL8A1-205ENST00000463753 HLA-DMBP28068 263 aa2.79□□□□□ -1.96
COL8A1-205ENST00000463753 LINC00305Q7Z4B0 112 aa2.79□□□□□ -1.96
COL8A1-205ENST00000463753 CD177Q8N6Q3 437 aa2.79□□□□□ -1.96
COL8A1-205ENST00000463753 FMC1Q96HJ9 113 aa2.79□□□□□ -1.96
COL8A1-205ENST00000463753 RITA1Q96K30 269 aa2.79□□□□□ -1.96
COL8A1-205ENST00000463753 MLST8Q9BVC4 326 aa2.79□□□□□ -1.96
COL8A1-205ENST00000463753 KRTAP9-8Q9BYQ0 159 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms