RNA–Protein interactions for RNA: ENST00000462181.1

CALD1-213, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 188 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-213ENST00000462181 HYPMO75409 117 aa0.73□□□□□ -2.29
CALD1-213ENST00000462181 HIST1H2BOP23527 126 aa0.73□□□□□ -2.29
CALD1-213ENST00000462181 HIST1H2BBP33778 126 aa0.73□□□□□ -2.29
CALD1-213ENST00000462181 HIST1H2BDP58876 126 aa0.73□□□□□ -2.29
CALD1-213ENST00000462181 HIST1H2BCP62807 126 aa0.73□□□□□ -2.29
CALD1-213ENST00000462181 RBM3P98179 157 aaKnown RBP0.73□□□□□ -2.29
CALD1-213ENST00000462181 HIST2H2BEQ16778 126 aa0.73□□□□□ -2.29
CALD1-213ENST00000462181 SPANXN3Q5MJ09 141 aa0.73□□□□□ -2.29
CALD1-213ENST00000462181 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.73□□□□□ -2.29
CALD1-213ENST00000462181 RPL22L1Q6P5R6 122 aaKnown RBP0.73□□□□□ -2.29
CALD1-213ENST00000462181 LINC00311Q8N616 119 aa0.73□□□□□ -2.29
CALD1-213ENST00000462181 RAB8BQ92930 207 aa0.73□□□□□ -2.29
CALD1-213ENST00000462181 HIST1H2BHQ93079 126 aa0.73□□□□□ -2.29
CALD1-213ENST00000462181 HIST1H2BNQ99877 126 aa0.73□□□□□ -2.29
CALD1-213ENST00000462181 HIST1H2BMQ99879 126 aa0.73□□□□□ -2.29
CALD1-213ENST00000462181 LINC00854A0A1B0GVQ3 168 aa0.72□□□□□ -2.29
CALD1-213ENST00000462181 CTSDP07339 412 aaPredicted RBP0.72□□□□□ -2.29
CALD1-213ENST00000462181 SPI1P17947 270 aa0.72□□□□□ -2.29
CALD1-213ENST00000462181 SPANXN5Q5MJ07 72 aa0.72□□□□□ -2.29
CALD1-213ENST00000462181 FAM151BQ6UXP7 276 aa0.72□□□□□ -2.29
CALD1-213ENST00000462181 Q6ZQT0 140 aa0.72□□□□□ -2.29
CALD1-213ENST00000462181 KRTAP19-3Q7Z4W3 81 aa0.72□□□□□ -2.29
CALD1-213ENST00000462181 OOSP2Q86WS3 158 aa0.72□□□□□ -2.29
CALD1-213ENST00000462181 GKN2Q86XP6 184 aa0.72□□□□□ -2.29
CALD1-213ENST00000462181 Q8N814 137 aa0.72□□□□□ -2.29
CALD1-213ENST00000462181 PFN4Q8NHR9 129 aa0.72□□□□□ -2.29
CALD1-213ENST00000462181 MRPL30Q8TCC3 161 aaKnown RBP0.72□□□□□ -2.29
CALD1-213ENST00000462181 KLK6Q92876 244 aa0.72□□□□□ -2.29
CALD1-213ENST00000462181 C2orf70A6NJV1 201 aa0.71□□□□□ -2.3
CALD1-213ENST00000462181 LRRN3E7EW58 273 aa0.71□□□□□ -2.3
CALD1-213ENST00000462181 SLC16A4O15374 487 aa0.71□□□□□ -2.3
CALD1-213ENST00000462181 OR1I1O60431 355 aa0.71□□□□□ -2.3
CALD1-213ENST00000462181 MT2AP02795 61 aa0.71□□□□□ -2.3
CALD1-213ENST00000462181 MT1FP04733 61 aa0.71□□□□□ -2.3
CALD1-213ENST00000462181 CASQ1P31415 396 aa0.71□□□□□ -2.3
CALD1-213ENST00000462181 PDPK2PQ6A1A2 396 aa0.71□□□□□ -2.3
CALD1-213ENST00000462181 BPIFA4PQ86YQ2 179 aa0.71□□□□□ -2.3
CALD1-213ENST00000462181 OR4E2Q8NGC2 313 aa0.71□□□□□ -2.3
CALD1-213ENST00000462181 OR51I1Q9H343 314 aa0.71□□□□□ -2.3
CALD1-213ENST00000462181 RAB4BP61018 213 aa0.7□□□□□ -2.3
CALD1-213ENST00000462181 KCNJ8Q15842 424 aa0.7□□□□□ -2.3
CALD1-213ENST00000462181 DPPA3Q6W0C5 159 aa0.7□□□□□ -2.3
CALD1-213ENST00000462181 TMEM86BQ8N661 226 aa0.7□□□□□ -2.3
CALD1-213ENST00000462181 CFAP53Q96M91 514 aa0.7□□□□□ -2.3
CALD1-213ENST00000462181 USE1Q9NZ43 259 aa0.7□□□□□ -2.3
CALD1-213ENST00000462181 A0A0D9SG52 128 aa0.69□□□□□ -2.3
CALD1-213ENST00000462181 OR2T1O43869 369 aa0.69□□□□□ -2.3
CALD1-213ENST00000462181 KLF7O75840 302 aaPredicted RBP0.69□□□□□ -2.3
CALD1-213ENST00000462181 DEXIO95424 95 aa0.69□□□□□ -2.3
CALD1-213ENST00000462181 IGKV1-5P01602 117 aa0.69□□□□□ -2.3
CALD1-213ENST00000462181 RAB5BP61020 215 aa0.69□□□□□ -2.3
CALD1-213ENST00000462181 PDE6HQ13956 83 aa0.69□□□□□ -2.3
CALD1-213ENST00000462181 SFXN4Q6P4A7 337 aa0.69□□□□□ -2.3
CALD1-213ENST00000462181 CLVS1Q8IUQ0 354 aaPredicted RBP0.69□□□□□ -2.3
CALD1-213ENST00000462181 OR51D1Q8NGF3 324 aa0.69□□□□□ -2.3
CALD1-213ENST00000462181 FAIMQ9NVQ4 179 aa0.69□□□□□ -2.3
CALD1-213ENST00000462181 UQCRHP07919 91 aa0.68□□□□□ -2.3
CALD1-213ENST00000462181 AP2S1P53680 142 aaPredicted RBP0.68□□□□□ -2.3
CALD1-213ENST00000462181 HBA1P69905 142 aa0.68□□□□□ -2.3
CALD1-213ENST00000462181 KHDC3LQ587J8 217 aa0.68□□□□□ -2.3
CALD1-213ENST00000462181 GDF5OSQ5U4N7 250 aa0.68□□□□□ -2.3
CALD1-213ENST00000462181 MIR17HGQ75NE6 70 aa0.68□□□□□ -2.3
CALD1-213ENST00000462181 KRTAP8-1Q8IUC2 63 aa0.68□□□□□ -2.3
CALD1-213ENST00000462181 TMEM147Q9BVK8 224 aa0.68□□□□□ -2.3
CALD1-213ENST00000462181 XPNPEP1Q9NQW7 623 aa0.68□□□□□ -2.3
CALD1-213ENST00000462181 LSM5Q9Y4Y9 91 aaKnown RBP0.68□□□□□ -2.3
CALD1-213ENST00000462181 TRAV1-1A0A0B4J248 108 aa0.67□□□□□ -2.3
CALD1-213ENST00000462181 HMGA1P17096 107 aaKnown RBP0.67□□□□□ -2.3
CALD1-213ENST00000462181 MAGEA2P43356 314 aa0.67□□□□□ -2.3
CALD1-213ENST00000462181 TCL1AP56279 114 aa0.67□□□□□ -2.3
CALD1-213ENST00000462181 RPL37AP61513 92 aaKnown RBP0.67□□□□□ -2.3
CALD1-213ENST00000462181 PMAIP1Q13794 54 aa0.67□□□□□ -2.3
CALD1-213ENST00000462181 DEFB112Q30KQ8 113 aa0.67□□□□□ -2.3
CALD1-213ENST00000462181 LRRC25Q8N386 305 aaPredicted RBP0.67□□□□□ -2.3
CALD1-213ENST00000462181 OR13C4Q8NGS5 318 aa0.67□□□□□ -2.3
CALD1-213ENST00000462181 DNAJC9Q8WXX5 260 aa0.67□□□□□ -2.3
CALD1-213ENST00000462181 PSMF1Q92530 271 aa0.67□□□□□ -2.3
CALD1-213ENST00000462181 POP5Q969H6 163 aaKnown RBP0.67□□□□□ -2.3
CALD1-213ENST00000462181 IFNA10P01566 189 aa0.66□□□□□ -2.3
CALD1-213ENST00000462181 IFNA4P05014 189 aa0.66□□□□□ -2.3
CALD1-213ENST00000462181 IFNA16P05015 189 aa0.66□□□□□ -2.3
CALD1-213ENST00000462181 COX6A1P12074 109 aa0.66□□□□□ -2.3
CALD1-213ENST00000462181 MIFP14174 115 aa0.66□□□□□ -2.3
CALD1-213ENST00000462181 LPCAT4Q643R3 524 aa0.66□□□□□ -2.3
CALD1-213ENST00000462181 CD200R1LQ6Q8B3 271 aa0.66□□□□□ -2.3
CALD1-213ENST00000462181 OR5A1Q8NGJ0 315 aa0.66□□□□□ -2.3
CALD1-213ENST00000462181 CBLN4Q9NTU7 201 aa0.66□□□□□ -2.3
CALD1-213ENST00000462181 PLAC8Q9NZF1 115 aa0.66□□□□□ -2.3
CALD1-213ENST00000462181 TP73-AS1Q9UF72 201 aa0.66□□□□□ -2.3
CALD1-213ENST00000462181 CLDN25C9JDP6 229 aa0.65□□□□□ -2.31
CALD1-213ENST00000462181 RHOGP84095 191 aa0.65□□□□□ -2.31
CALD1-213ENST00000462181 RHEBQ15382 184 aa0.65□□□□□ -2.31
CALD1-213ENST00000462181 IMP4Q96G21 291 aaKnown RBP0.65□□□□□ -2.31
CALD1-213ENST00000462181 MIXL1Q9H2W2 232 aa0.65□□□□□ -2.31
CALD1-213ENST00000462181 ACER3Q9NUN7 267 aa0.65□□□□□ -2.31
CALD1-213ENST00000462181 TRBV6-8A0A0A6YYG3 113 aa0.64□□□□□ -2.31
CALD1-213ENST00000462181 ISG15P05161 165 aa0.64□□□□□ -2.31
CALD1-213ENST00000462181 OR5G3P0C626 314 aa0.64□□□□□ -2.31
CALD1-213ENST00000462181 BAALC-AS2P0C853 105 aa0.64□□□□□ -2.31
CALD1-213ENST00000462181 SSR2P43308 183 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms