RNA–Protein interactions for RNA: ENST00000461550.5

MRPL28-207, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 5

Gene MRPL28, Length 1,478 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-207ENST00000461550 PQLC2Q6ZP29 291 aa12.35□□□□□ -0.43
MRPL28-207ENST00000461550 TMEM256Q8N2U0 113 aa12.35□□□□□ -0.43
MRPL28-207ENST00000461550 CT45A10P0DMU9 189 aa12.34□□□□□ -0.43
MRPL28-207ENST00000461550 TAS2R60P59551 318 aa12.34□□□□□ -0.43
MRPL28-207ENST00000461550 RANP62826 216 aaKnown RBP12.34□□□□□ -0.43
MRPL28-207ENST00000461550 TMEM88Q6PEY1 159 aa12.34□□□□□ -0.43
MRPL28-207ENST00000461550 FAM213BQ8TBF2 198 aa12.34□□□□□ -0.43
MRPL28-207ENST00000461550 CTXND1A0A1B0GTU2 59 aa12.34□□□□□ -0.43
MRPL28-207ENST00000461550 LYRM9A8MSI8 78 aa12.34□□□□□ -0.43
MRPL28-207ENST00000461550 NPIPB6E9PJ23 425 aa12.34□□□□□ -0.43
MRPL28-207ENST00000461550 F8W036 122 aa12.34□□□□□ -0.43
MRPL28-207ENST00000461550 ZNF253O75346 499 aa12.34□□□□□ -0.43
MRPL28-207ENST00000461550 P0DMU3 169 aa12.34□□□□□ -0.43
MRPL28-207ENST00000461550 FAM231AP0DMU4 169 aa12.34□□□□□ -0.43
MRPL28-207ENST00000461550 FAM231CP0DMU5 169 aa12.34□□□□□ -0.43
MRPL28-207ENST00000461550 RAB5CP51148 216 aa12.34□□□□□ -0.43
MRPL28-207ENST00000461550 FGF8P55075 233 aaPredicted RBP12.34□□□□□ -0.43
MRPL28-207ENST00000461550 BLOC1S1P78537 153 aa12.34□□□□□ -0.43
MRPL28-207ENST00000461550 PDE6HQ13956 83 aa12.34□□□□□ -0.43
MRPL28-207ENST00000461550 ICAM4Q14773 271 aa12.34□□□□□ -0.43
MRPL28-207ENST00000461550 DNAH6Q9C0G6 4158 aa12.33□□□□□ -0.44
MRPL28-207ENST00000461550 GCHFRP30047 84 aa12.33□□□□□ -0.44
MRPL28-207ENST00000461550 ERCC8Q13216 396 aa12.33□□□□□ -0.44
MRPL28-207ENST00000461550 DPPA3Q6W0C5 159 aa12.33□□□□□ -0.44
MRPL28-207ENST00000461550 POM121L12Q8N7R1 296 aa12.33□□□□□ -0.44
MRPL28-207ENST00000461550 AAMDCQ9H7C9 122 aa12.33□□□□□ -0.44
MRPL28-207ENST00000461550 H7BYZ3 331 aa12.32□□□□□ -0.44
MRPL28-207ENST00000461550 CXorf1O96002 111 aa12.32□□□□□ -0.44
MRPL28-207ENST00000461550 C16orf74Q96GX8 76 aa12.32□□□□□ -0.44
MRPL28-207ENST00000461550 FAM210BQ96KR6 192 aa12.32□□□□□ -0.44
MRPL28-207ENST00000461550 Q9H3A6 140 aa12.32□□□□□ -0.44
MRPL28-207ENST00000461550 TMPRSS5Q9H3S3 457 aa12.32□□□□□ -0.44
MRPL28-207ENST00000461550 TRAV12-3A0A0B4J271 114 aa12.31□□□□□ -0.44
MRPL28-207ENST00000461550 S100A8P05109 93 aa12.31□□□□□ -0.44
MRPL28-207ENST00000461550 ADCYAP1P18509 176 aa12.31□□□□□ -0.44
MRPL28-207ENST00000461550 LEPP41159 167 aa12.31□□□□□ -0.44
MRPL28-207ENST00000461550 RNF212Q495C1 297 aa12.31□□□□□ -0.44
MRPL28-207ENST00000461550 RNASE8Q8TDE3 154 aaKnown RBP12.31□□□□□ -0.44
MRPL28-207ENST00000461550 C12orf57Q99622 126 aa12.31□□□□□ -0.44
MRPL28-207ENST00000461550 NOP10Q9NPE3 64 aaKnown RBP12.31□□□□□ -0.44
MRPL28-207ENST00000461550 IGKV2-40A0A087WW87 121 aaPredicted RBP12.3□□□□□ -0.44
MRPL28-207ENST00000461550 MAP1LC3B2A6NCE7 125 aa12.3□□□□□ -0.44
MRPL28-207ENST00000461550 M0R2N4 97 aa12.3□□□□□ -0.44
MRPL28-207ENST00000461550 IGKV2D-40P01614 121 aaPredicted RBP12.3□□□□□ -0.44
MRPL28-207ENST00000461550 UBE2DNLQ8IWF7 75 aa12.3□□□□□ -0.44
MRPL28-207ENST00000461550 C15orf54Q8N8G6 183 aa12.3□□□□□ -0.44
MRPL28-207ENST00000461550 TMEM263Q8WUH6 116 aaKnown RBP12.3□□□□□ -0.44
MRPL28-207ENST00000461550 MRPL53Q96EL3 112 aaKnown RBP12.3□□□□□ -0.44
MRPL28-207ENST00000461550 MAP1LC3BQ9GZQ8 125 aa12.3□□□□□ -0.44
MRPL28-207ENST00000461550 TIMM8BQ9Y5J9 83 aaPredicted RBP12.3□□□□□ -0.44
MRPL28-207ENST00000461550 A0A1B0GV50 99 aa12.29□□□□□ -0.44
MRPL28-207ENST00000461550 PGPA6NDG6 321 aa12.29□□□□□ -0.44
MRPL28-207ENST00000461550 MBD3L1Q8WWY6 194 aa12.29□□□□□ -0.44
MRPL28-207ENST00000461550 ODF3Q96PU9 254 aa12.29□□□□□ -0.44
MRPL28-207ENST00000461550 C20orf144Q9BQM9 153 aa12.29□□□□□ -0.44
MRPL28-207ENST00000461550 TMEM167BQ9NRX6 74 aa12.29□□□□□ -0.44
MRPL28-207ENST00000461550 NACAE9PAV3 2078 aa12.29□□□□□ -0.44
MRPL28-207ENST00000461550 F5H768 121 aa12.28□□□□□ -0.44
MRPL28-207ENST00000461550 SMIM6P0DI80 62 aa12.28□□□□□ -0.44
MRPL28-207ENST00000461550 RAB5BP61020 215 aa12.28□□□□□ -0.44
MRPL28-207ENST00000461550 ZNF493Q6ZR52 646 aa12.28□□□□□ -0.44
MRPL28-207ENST00000461550 LYPD1Q8N2G4 141 aa12.28□□□□□ -0.44
MRPL28-207ENST00000461550 SFT2D1Q8WV19 159 aa12.28□□□□□ -0.44
MRPL28-207ENST00000461550 AGPAT4-IT1Q9H0P7 198 aa12.28□□□□□ -0.44
MRPL28-207ENST00000461550 TREM1Q9NP99 234 aa12.28□□□□□ -0.44
MRPL28-207ENST00000461550 SMCO4Q9NRQ5 59 aa12.28□□□□□ -0.44
MRPL28-207ENST00000461550 IGLV2-18A0A075B6J9 118 aa12.27□□□□□ -0.44
MRPL28-207ENST00000461550 AKR1D1P51857 326 aa12.27□□□□□ -0.44
MRPL28-207ENST00000461550 TCEAL7Q9BRU2 100 aa12.27□□□□□ -0.44
MRPL28-207ENST00000461550 OTORQ9NRC9 128 aa12.27□□□□□ -0.44
MRPL28-207ENST00000461550 RPH3ALQ9UNE2 315 aa12.27□□□□□ -0.44
MRPL28-207ENST00000461550 PCP4L1A6NKN8 68 aa12.27□□□□□ -0.45
MRPL28-207ENST00000461550 ATP5G1P05496 136 aa12.27□□□□□ -0.45
MRPL28-207ENST00000461550 RPL35P42766 123 aaKnown RBP12.27□□□□□ -0.45
MRPL28-207ENST00000461550 ATP5G3P48201 142 aa12.27□□□□□ -0.45
MRPL28-207ENST00000461550 UBE2G2P60604 165 aa12.27□□□□□ -0.45
MRPL28-207ENST00000461550 PEA15Q15121 130 aa12.27□□□□□ -0.45
MRPL28-207ENST00000461550 VGLL1Q99990 258 aa12.27□□□□□ -0.45
MRPL28-207ENST00000461550 C7orf71A4D174 169 aa12.26□□□□□ -0.45
MRPL28-207ENST00000461550 CBY3A6NI87 242 aa12.26□□□□□ -0.45
MRPL28-207ENST00000461550 CSN1S1P47710 185 aa12.26□□□□□ -0.45
MRPL28-207ENST00000461550 CBLN2Q8IUK8 224 aa12.26□□□□□ -0.45
MRPL28-207ENST00000461550 LYPD6BQ8NI32 183 aa12.26□□□□□ -0.45
MRPL28-207ENST00000461550 CMTM2Q8TAZ6 248 aa12.26□□□□□ -0.45
MRPL28-207ENST00000461550 COLCA2A8K830 154 aa12.25□□□□□ -0.45
MRPL28-207ENST00000461550 SLC25A5P05141 298 aaKnown RBP12.25□□□□□ -0.45
MRPL28-207ENST00000461550 RNASE4P34096 147 aaKnown RBP12.25□□□□□ -0.45
MRPL28-207ENST00000461550 SUMO1P63165 101 aaKnown RBP12.25□□□□□ -0.45
MRPL28-207ENST00000461550 GNG5P63218 68 aa12.25□□□□□ -0.45
MRPL28-207ENST00000461550 RXFP4Q8TDU9 374 aa12.25□□□□□ -0.45
MRPL28-207ENST00000461550 FAM19A4Q96LR4 140 aa12.25□□□□□ -0.45
MRPL28-207ENST00000461550 LINC00477Q96M19 166 aa12.25□□□□□ -0.45
MRPL28-207ENST00000461550 TRAV1-1A0A0B4J248 108 aa12.24□□□□□ -0.45
MRPL28-207ENST00000461550 GAGE12BA1L429 117 aa12.24□□□□□ -0.45
MRPL28-207ENST00000461550 KLLNB2CW77 178 aa12.24□□□□□ -0.45
MRPL28-207ENST00000461550 DIRC3C9JPN6 131 aa12.24□□□□□ -0.45
MRPL28-207ENST00000461550 GAGE7O76087 117 aa12.24□□□□□ -0.45
MRPL28-207ENST00000461550 NUDT3O95989 172 aa12.24□□□□□ -0.45
MRPL28-207ENST00000461550 GAGE12FP0CL80 117 aa12.24□□□□□ -0.45
MRPL28-207ENST00000461550 GAGE12GP0CL81 117 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms