RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 PRNTQ86SH4 94 aa8.14□□□□□ -1.11
SSBP1-202ENST00000461433 C11orf52Q96A22 123 aa8.14□□□□□ -1.11
SSBP1-202ENST00000461433 C8orf49Q96NF6 230 aa8.14□□□□□ -1.11
SSBP1-202ENST00000461433 C20orf144Q9BQM9 153 aa8.14□□□□□ -1.11
SSBP1-202ENST00000461433 TREM1Q9NP99 234 aa8.14□□□□□ -1.11
SSBP1-202ENST00000461433 TRBV6-1A0A0K0K1D8 114 aa8.13□□□□□ -1.11
SSBP1-202ENST00000461433 RBFOX3A6NFN3 312 aa8.13□□□□□ -1.11
SSBP1-202ENST00000461433 TAGLN2P37802 199 aaKnown RBP8.13□□□□□ -1.11
SSBP1-202ENST00000461433 TMEM183BQ1AE95 376 aa8.13□□□□□ -1.11
SSBP1-202ENST00000461433 Q86TA4 180 aa8.13□□□□□ -1.11
SSBP1-202ENST00000461433 FMC1Q96HJ9 113 aa8.13□□□□□ -1.11
SSBP1-202ENST00000461433 EDA2RQ9HAV5 297 aa8.13□□□□□ -1.11
SSBP1-202ENST00000461433 IGHV4-28A0A0C4DH34 117 aa8.12□□□□□ -1.11
SSBP1-202ENST00000461433 MIFP14174 115 aa8.12□□□□□ -1.11
SSBP1-202ENST00000461433 AKR1C3P42330 323 aa8.12□□□□□ -1.11
SSBP1-202ENST00000461433 ZNF80P51504 273 aaPredicted RBP8.12□□□□□ -1.11
SSBP1-202ENST00000461433 ZNF506Q5JVG8 444 aa8.12□□□□□ -1.11
SSBP1-202ENST00000461433 Q6AWC8 147 aa8.12□□□□□ -1.11
SSBP1-202ENST00000461433 TMEM256Q8N2U0 113 aa8.12□□□□□ -1.11
SSBP1-202ENST00000461433 LINC01587Q99440 93 aa8.12□□□□□ -1.11
SSBP1-202ENST00000461433 DERL1Q9BUN8 251 aa8.12□□□□□ -1.11
SSBP1-202ENST00000461433 A0A0J9YWU9 116 aa8.11□□□□□ -1.11
SSBP1-202ENST00000461433 SMIM9A6NGZ8 99 aa8.11□□□□□ -1.11
SSBP1-202ENST00000461433 ZNF705GA8MUZ8 300 aaPredicted RBP8.11□□□□□ -1.11
SSBP1-202ENST00000461433 H7BYZ3 331 aa8.11□□□□□ -1.11
SSBP1-202ENST00000461433 DEFB4AO15263 64 aa8.11□□□□□ -1.11
SSBP1-202ENST00000461433 PDE6DO43924 150 aa8.11□□□□□ -1.11
SSBP1-202ENST00000461433 LTAP01374 205 aa8.11□□□□□ -1.11
SSBP1-202ENST00000461433 AZU1P20160 251 aa8.11□□□□□ -1.11
SSBP1-202ENST00000461433 SAPCD1Q5SSQ6 148 aa8.11□□□□□ -1.11
SSBP1-202ENST00000461433 ZNF767PQ75MW2 155 aa8.11□□□□□ -1.11
SSBP1-202ENST00000461433 COX8CQ7Z4L0 72 aa8.11□□□□□ -1.11
SSBP1-202ENST00000461433 TMEM208Q9BTX3 173 aa8.11□□□□□ -1.11
SSBP1-202ENST00000461433 RPL35P42766 123 aaKnown RBP8.11□□□□□ -1.11
SSBP1-202ENST00000461433 TAS2R60P59551 318 aa8.11□□□□□ -1.11
SSBP1-202ENST00000461433 UBE2G1P62253 170 aa8.11□□□□□ -1.11
SSBP1-202ENST00000461433 NIPSNAP3BQ9BS92 247 aa8.11□□□□□ -1.11
SSBP1-202ENST00000461433 NDFIP1Q9BT67 221 aa8.11□□□□□ -1.11
SSBP1-202ENST00000461433 C11orf68Q9H3H3 251 aaKnown RBP8.11□□□□□ -1.11
SSBP1-202ENST00000461433 ZFP30Q9Y2G7 519 aa8.11□□□□□ -1.11
SSBP1-202ENST00000461433 STAB2Q8WWQ8 2551 aa8.1□□□□□ -1.11
SSBP1-202ENST00000461433 PLAC8L1A1L4L8 177 aa8.1□□□□□ -1.11
SSBP1-202ENST00000461433 GCGP01275 180 aa8.1□□□□□ -1.11
SSBP1-202ENST00000461433 S100A9P06702 114 aaKnown RBP8.1□□□□□ -1.11
SSBP1-202ENST00000461433 CRIP1P50238 77 aa8.1□□□□□ -1.11
SSBP1-202ENST00000461433 RRN3P1Q2M238 152 aa8.1□□□□□ -1.11
SSBP1-202ENST00000461433 TOR2AQ5JU69 321 aa8.1□□□□□ -1.11
SSBP1-202ENST00000461433 PYGO2Q9BRQ0 406 aa8.1□□□□□ -1.11
SSBP1-202ENST00000461433 LINC00467Q9BRT7 94 aa8.1□□□□□ -1.11
SSBP1-202ENST00000461433 MLST8Q9BVC4 326 aa8.1□□□□□ -1.11
SSBP1-202ENST00000461433 RAB19A4D1S5 217 aa8.09□□□□□ -1.11
SSBP1-202ENST00000461433 SRSF3P84103 164 aaKnown RBP8.09□□□□□ -1.11
SSBP1-202ENST00000461433 SMUG1Q53HV7 270 aa8.09□□□□□ -1.11
SSBP1-202ENST00000461433 CLLU1Q5K131 121 aa8.09□□□□□ -1.11
SSBP1-202ENST00000461433 TMEM183AQ8IXX5 376 aa8.09□□□□□ -1.11
SSBP1-202ENST00000461433 ZC2HC1AQ96GY0 325 aa8.09□□□□□ -1.11
SSBP1-202ENST00000461433 EIF5A2Q9GZV4 153 aaKnown RBP8.09□□□□□ -1.11
SSBP1-202ENST00000461433 MED9Q9NWA0 146 aa8.09□□□□□ -1.11
SSBP1-202ENST00000461433 C11orf21Q9P2W6 132 aa8.09□□□□□ -1.11
SSBP1-202ENST00000461433 TRBV20OR9-2A0A075B6H5 130 aa8.08□□□□□ -1.12
SSBP1-202ENST00000461433 NDUFS6O75380 124 aaKnown RBP8.08□□□□□ -1.12
SSBP1-202ENST00000461433 IGLV2-8P01709 118 aa8.08□□□□□ -1.12
SSBP1-202ENST00000461433 HTN1P15515 57 aa8.08□□□□□ -1.12
SSBP1-202ENST00000461433 NHLRC2Q8NBF2 726 aa8.08□□□□□ -1.12
SSBP1-202ENST00000461433 RNASE8Q8TDE3 154 aaKnown RBP8.08□□□□□ -1.12
SSBP1-202ENST00000461433 TP53TG3Q9ULZ0 132 aa8.08□□□□□ -1.12
SSBP1-202ENST00000461433 IGHV1OR15-1A0A075B7D0 117 aa8.08□□□□□ -1.12
SSBP1-202ENST00000461433 TRAV21A0A0B4J279 112 aa8.08□□□□□ -1.12
SSBP1-202ENST00000461433 C9JQL5 133 aa8.08□□□□□ -1.12
SSBP1-202ENST00000461433 TMEM250H0YL14 139 aa8.08□□□□□ -1.12
SSBP1-202ENST00000461433 PFN1P07737 140 aaKnown RBP8.08□□□□□ -1.12
SSBP1-202ENST00000461433 SRP19P09132 144 aaKnown RBP8.08□□□□□ -1.12
SSBP1-202ENST00000461433 RAB14P61106 215 aa8.08□□□□□ -1.12
SSBP1-202ENST00000461433 ANXA2RQ3ZCQ2 193 aa8.08□□□□□ -1.12
SSBP1-202ENST00000461433 MUC21Q5SSG8 566 aa8.08□□□□□ -1.12
SSBP1-202ENST00000461433 BAGE2Q86Y30 109 aa8.08□□□□□ -1.12
SSBP1-202ENST00000461433 EIF4E3Q8N5X7 224 aaKnown RBP8.08□□□□□ -1.12
SSBP1-202ENST00000461433 RGS13O14921 159 aa8.07□□□□□ -1.12
SSBP1-202ENST00000461433 ZNF674Q2M3X9 581 aa8.07□□□□□ -1.12
SSBP1-202ENST00000461433 TDRG1Q3Y452 100 aa8.07□□□□□ -1.12
SSBP1-202ENST00000461433 CENPWQ5EE01 88 aa8.07□□□□□ -1.12
SSBP1-202ENST00000461433 C11orf72Q8NBR9 251 aa8.07□□□□□ -1.12
SSBP1-202ENST00000461433 TMEM263Q8WUH6 116 aaKnown RBP8.07□□□□□ -1.12
SSBP1-202ENST00000461433 CELA1Q9UNI1 258 aa8.07□□□□□ -1.12
SSBP1-202ENST00000461433 LOC100996750A0A140TA64 210 aa8.06□□□□□ -1.12
SSBP1-202ENST00000461433 TMEM189A5PLL7 270 aa8.06□□□□□ -1.12
SSBP1-202ENST00000461433 FABP5P3A8MUU1 101 aa8.06□□□□□ -1.12
SSBP1-202ENST00000461433 EMP1P54849 157 aa8.06□□□□□ -1.12
SSBP1-202ENST00000461433 ZNF493Q6ZR52 646 aa8.06□□□□□ -1.12
SSBP1-202ENST00000461433 ZNF575Q86XF7 245 aa8.06□□□□□ -1.12
SSBP1-202ENST00000461433 C16orf74Q96GX8 76 aa8.06□□□□□ -1.12
SSBP1-202ENST00000461433 WWC2-AS2Q96NR7 200 aa8.06□□□□□ -1.12
SSBP1-202ENST00000461433 KRTAP4-6Q9BYQ5 205 aa8.06□□□□□ -1.12
SSBP1-202ENST00000461433 PARLQ9H300 379 aa8.06□□□□□ -1.12
SSBP1-202ENST00000461433 IGKV3D-20A0A0C4DH25 116 aa8.05□□□□□ -1.12
SSBP1-202ENST00000461433 PGPEP1LA6NFU8 196 aa8.05□□□□□ -1.12
SSBP1-202ENST00000461433 CBY3A6NI87 242 aa8.05□□□□□ -1.12
SSBP1-202ENST00000461433 GNRH2O43555 120 aa8.05□□□□□ -1.12
SSBP1-202ENST00000461433 FAM159AQ6UWV7 190 aa8.05□□□□□ -1.12
SSBP1-202ENST00000461433 IL17DQ8TAD2 202 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms