RNA–Protein interactions for RNA: ENST00000461409.1

HDAC9-220, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-220ENST00000461409 RNF151Q2KHN1 245 aa6.01□□□□□ -1.45
HDAC9-220ENST00000461409 IBA57Q5T440 356 aaKnown RBP6.01□□□□□ -1.45
HDAC9-220ENST00000461409 C9orf47Q6ZRZ4 202 aa6.01□□□□□ -1.45
HDAC9-220ENST00000461409 LINC00299Q6ZSB3 139 aa6.01□□□□□ -1.45
HDAC9-220ENST00000461409 EXOC3-AS1Q8N2X6 119 aa6.01□□□□□ -1.45
HDAC9-220ENST00000461409 EIF4E3Q8N5X7 224 aaKnown RBP6.01□□□□□ -1.45
HDAC9-220ENST00000461409 C11orf72Q8NBR9 251 aa6.01□□□□□ -1.45
HDAC9-220ENST00000461409 BLNKQ8WV28 456 aa6.01□□□□□ -1.45
HDAC9-220ENST00000461409 FAM19A4Q96LR4 140 aa6.01□□□□□ -1.45
HDAC9-220ENST00000461409 SLC25A31Q9H0C2 315 aa6.01□□□□□ -1.45
HDAC9-220ENST00000461409 AGPAT4-IT1Q9H0P7 198 aa6.01□□□□□ -1.45
HDAC9-220ENST00000461409 FUT9Q9Y231 359 aa6.01□□□□□ -1.45
HDAC9-220ENST00000461409 TRBV7-9A0A0J9YWB2 115 aa6□□□□□ -1.45
HDAC9-220ENST00000461409 E5RGE8 158 aa6□□□□□ -1.45
HDAC9-220ENST00000461409 ZNF324O75467 553 aaPredicted RBP6□□□□□ -1.45
HDAC9-220ENST00000461409 TCL1AP56279 114 aa6□□□□□ -1.45
HDAC9-220ENST00000461409 CD300CQ08708 224 aa6□□□□□ -1.45
HDAC9-220ENST00000461409 BTN1A1Q13410 526 aa6□□□□□ -1.45
HDAC9-220ENST00000461409 ASAH1Q13510 395 aa6□□□□□ -1.45
HDAC9-220ENST00000461409 FAM122CQ6P4D5 195 aa6□□□□□ -1.45
HDAC9-220ENST00000461409 SPATA12Q7Z6I5 190 aa6□□□□□ -1.45
HDAC9-220ENST00000461409 OR5C1Q8NGR4 320 aa6□□□□□ -1.45
HDAC9-220ENST00000461409 THAP6Q8TBB0 222 aa6□□□□□ -1.45
HDAC9-220ENST00000461409 ARPC5LQ9BPX5 153 aa6□□□□□ -1.45
HDAC9-220ENST00000461409 SLC25A2Q9BXI2 301 aa6□□□□□ -1.45
HDAC9-220ENST00000461409 MRPL32Q9BYC8 188 aaKnown RBP6□□□□□ -1.45
HDAC9-220ENST00000461409 KRTAP1-5Q9BYS1 174 aa6□□□□□ -1.45
HDAC9-220ENST00000461409 ABCA13Q86UQ4 5058 aa6□□□□□ -1.45
HDAC9-220ENST00000461409 IGKV2-40A0A087WW87 121 aaPredicted RBP5.99□□□□□ -1.45
HDAC9-220ENST00000461409 A0A096LPF7 62 aa5.99□□□□□ -1.45
HDAC9-220ENST00000461409 SPINK4O60575 86 aa5.99□□□□□ -1.45
HDAC9-220ENST00000461409 IGKV2D-40P01614 121 aaPredicted RBP5.99□□□□□ -1.45
HDAC9-220ENST00000461409 NBEAP1P0C6P0 100 aa5.99□□□□□ -1.45
HDAC9-220ENST00000461409 CSN1S1P47710 185 aa5.99□□□□□ -1.45
HDAC9-220ENST00000461409 CYCSP99999 105 aaKnown RBP5.99□□□□□ -1.45
HDAC9-220ENST00000461409 SLAQ13239 276 aa5.99□□□□□ -1.45
HDAC9-220ENST00000461409 GCSAMLQ5JQS6 135 aa5.99□□□□□ -1.45
HDAC9-220ENST00000461409 ZFAND2AQ8N6M9 145 aa5.99□□□□□ -1.45
HDAC9-220ENST00000461409 MAPKAPK5-AS1Q8N8E1 139 aa5.99□□□□□ -1.45
HDAC9-220ENST00000461409 ENKURQ8TC29 256 aa5.99□□□□□ -1.45
HDAC9-220ENST00000461409 S100ZQ8WXG8 99 aa5.99□□□□□ -1.45
HDAC9-220ENST00000461409 VSIG2Q96IQ7 327 aa5.99□□□□□ -1.45
HDAC9-220ENST00000461409 ST6GAL2Q96JF0 529 aa5.99□□□□□ -1.45
HDAC9-220ENST00000461409 FAM167A-AS1Q96KT0 104 aa5.99□□□□□ -1.45
HDAC9-220ENST00000461409 PAXXQ9BUH6 204 aa5.99□□□□□ -1.45
HDAC9-220ENST00000461409 NMES1Q9C002 83 aa5.99□□□□□ -1.45
HDAC9-220ENST00000461409 OR51M1Q9H341 326 aa5.99□□□□□ -1.45
HDAC9-220ENST00000461409 ICOSQ9Y6W8 199 aa5.99□□□□□ -1.45
HDAC9-220ENST00000461409 IGHV1OR15-1A0A075B7D0 117 aa5.98□□□□□ -1.45
HDAC9-220ENST00000461409 C17orf112F2Z3M2 114 aa5.98□□□□□ -1.45
HDAC9-220ENST00000461409 OR7C2O60412 319 aa5.98□□□□□ -1.45
HDAC9-220ENST00000461409 ZNF138P52744 262 aa5.98□□□□□ -1.45
HDAC9-220ENST00000461409 NHLH2Q02577 135 aa5.98□□□□□ -1.45
HDAC9-220ENST00000461409 ZNF415Q09FC8 603 aa5.98□□□□□ -1.45
HDAC9-220ENST00000461409 MIR17HGQ75NE6 70 aa5.98□□□□□ -1.45
HDAC9-220ENST00000461409 LYPD1Q8N2G4 141 aa5.98□□□□□ -1.45
HDAC9-220ENST00000461409 VGLL1Q99990 258 aa5.98□□□□□ -1.45
HDAC9-220ENST00000461409 ZNF492Q9P255 531 aa5.98□□□□□ -1.45
HDAC9-220ENST00000461409 PRO0255Q9UI72 69 aa5.98□□□□□ -1.45
HDAC9-220ENST00000461409 KLF12Q9Y4X4 402 aa5.98□□□□□ -1.45
HDAC9-220ENST00000461409 HSPG2P98160 4391 aa5.98□□□□□ -1.45
HDAC9-220ENST00000461409 RBAKDNA6NC62 111 aa5.97□□□□□ -1.45
HDAC9-220ENST00000461409 SIVA1O15304 175 aa5.97□□□□□ -1.45
HDAC9-220ENST00000461409 PRAF2O60831 178 aa5.97□□□□□ -1.45
HDAC9-220ENST00000461409 NXPH4O95158 308 aa5.97□□□□□ -1.45
HDAC9-220ENST00000461409 OR10J4P0C629 311 aa5.97□□□□□ -1.45
HDAC9-220ENST00000461409 PET100P0DJ07 73 aa5.97□□□□□ -1.45
HDAC9-220ENST00000461409 LINC00315P59091 139 aa5.97□□□□□ -1.45
HDAC9-220ENST00000461409 LRRC37A5PQ49AS3 106 aa5.97□□□□□ -1.45
HDAC9-220ENST00000461409 Q8N1X5 172 aa5.97□□□□□ -1.45
HDAC9-220ENST00000461409 FXYD5Q96DB9 178 aa5.97□□□□□ -1.45
HDAC9-220ENST00000461409 ATP5SQ99766 215 aa5.97□□□□□ -1.45
HDAC9-220ENST00000461409 WDR61Q9GZS3 305 aaKnown RBP5.97□□□□□ -1.45
HDAC9-220ENST00000461409 MRPL16Q9NX20 251 aaKnown RBP5.97□□□□□ -1.45
HDAC9-220ENST00000461409 OR5AC2Q9NZP5 309 aa5.97□□□□□ -1.45
HDAC9-220ENST00000461409 HHLA3Q9XRX5 114 aa5.97□□□□□ -1.45
HDAC9-220ENST00000461409 SIX6O95475 246 aa5.96□□□□□ -1.46
HDAC9-220ENST00000461409 IGHV3-53P01767 116 aa5.96□□□□□ -1.46
HDAC9-220ENST00000461409 TAS2R45P59539 299 aa5.96□□□□□ -1.46
HDAC9-220ENST00000461409 RANP62826 216 aaKnown RBP5.96□□□□□ -1.46
HDAC9-220ENST00000461409 UBE2L3P68036 154 aaKnown RBP5.96□□□□□ -1.46
HDAC9-220ENST00000461409 ZNF266Q14584 549 aa5.96□□□□□ -1.46
HDAC9-220ENST00000461409 MRPL23Q16540 153 aaKnown RBP5.96□□□□□ -1.46
HDAC9-220ENST00000461409 KHDC3LQ587J8 217 aa5.96□□□□□ -1.46
HDAC9-220ENST00000461409 PRR9Q5T870 116 aa5.96□□□□□ -1.46
HDAC9-220ENST00000461409 NEGR1Q7Z3B1 354 aa5.96□□□□□ -1.46
HDAC9-220ENST00000461409 Q8TAT8 98 aa5.96□□□□□ -1.46
HDAC9-220ENST00000461409 PHYHIPLQ96FC7 376 aa5.96□□□□□ -1.46
HDAC9-220ENST00000461409 PTTG2Q9NZH5 202 aa5.96□□□□□ -1.46
HDAC9-220ENST00000461409 TP53TG3Q9ULZ0 132 aa5.96□□□□□ -1.46
HDAC9-220ENST00000461409 LENEPQ9Y5L5 61 aa5.96□□□□□ -1.46
HDAC9-220ENST00000461409 LRP1BQ9NZR2 4599 aa5.96□□□□□ -1.46
HDAC9-220ENST00000461409 TRAV9-2A0A087WT02 112 aa5.95□□□□□ -1.46
HDAC9-220ENST00000461409 TRGV4A0A0C4DH28 118 aa5.95□□□□□ -1.46
HDAC9-220ENST00000461409 K7EP13 123 aa5.95□□□□□ -1.46
HDAC9-220ENST00000461409 UPK1BO75841 260 aa5.95□□□□□ -1.46
HDAC9-220ENST00000461409 IFNA5P01569 189 aa5.95□□□□□ -1.46
HDAC9-220ENST00000461409 CRYBA4P53673 196 aa5.95□□□□□ -1.46
HDAC9-220ENST00000461409 FFAR4Q5NUL3 377 aa5.95□□□□□ -1.46
HDAC9-220ENST00000461409 NFE4Q86UQ8 179 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms