RNA–Protein interactions for RNA: ENST00000461132.1

SPTLC1-203, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 808 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-203ENST00000461132 C5orf17Q8NAS9 161 aa1.7□□□□□ -2.14
SPTLC1-203ENST00000461132 ATP6V0E2Q8NHE4 81 aa1.7□□□□□ -2.14
SPTLC1-203ENST00000461132 Q8TAT8 98 aa1.7□□□□□ -2.14
SPTLC1-203ENST00000461132 REG4Q9BYZ8 158 aa1.7□□□□□ -2.14
SPTLC1-203ENST00000461132 TAS2R8Q9NYW2 309 aa1.7□□□□□ -2.14
SPTLC1-203ENST00000461132 NOP16Q9Y3C1 178 aaKnown RBP1.7□□□□□ -2.14
SPTLC1-203ENST00000461132 LTBP2Q14767 1821 aa1.7□□□□□ -2.14
SPTLC1-203ENST00000461132 ADGRB3O60242 1522 aa1.7□□□□□ -2.14
SPTLC1-203ENST00000461132 ROCK2O75116 1388 aaKnown RBP1.7□□□□□ -2.14
SPTLC1-203ENST00000461132 DIDO1Q9BTC0 2240 aaKnown RBP1.7□□□□□ -2.14
SPTLC1-203ENST00000461132 COL1A1P02452 1464 aaPredicted RBP1.69□□□□□ -2.14
SPTLC1-203ENST00000461132 MICAL3Q7RTP6 2002 aa1.69□□□□□ -2.14
SPTLC1-203ENST00000461132 SCN3AQ9NY46 2000 aa1.69□□□□□ -2.14
SPTLC1-203ENST00000461132 COL11A1P12107 1806 aaPredicted RBP1.69□□□□□ -2.14
SPTLC1-203ENST00000461132 M0R2P5 195 aa1.69□□□□□ -2.14
SPTLC1-203ENST00000461132 APODP05090 189 aa1.69□□□□□ -2.14
SPTLC1-203ENST00000461132 SNX29P2Q8IUI4 249 aa1.69□□□□□ -2.14
SPTLC1-203ENST00000461132 TCTEX1D1Q8N7M0 179 aa1.69□□□□□ -2.14
SPTLC1-203ENST00000461132 LINC00052Q96N35 136 aa1.69□□□□□ -2.14
SPTLC1-203ENST00000461132 MYLKQ15746 1914 aa1.69□□□□□ -2.14
SPTLC1-203ENST00000461132 NUMA1Q14980 2115 aa1.69□□□□□ -2.14
SPTLC1-203ENST00000461132 MDC1Q14676 2089 aaKnown RBP1.68□□□□□ -2.14
SPTLC1-203ENST00000461132 ARHGAP31Q2M1Z3 1444 aa1.68□□□□□ -2.14
SPTLC1-203ENST00000461132 IGLV3-32A0A0A0MS00 114 aa1.68□□□□□ -2.14
SPTLC1-203ENST00000461132 LINC00587B1AMM8 73 aa1.68□□□□□ -2.14
SPTLC1-203ENST00000461132 J3QLW9 94 aa1.68□□□□□ -2.14
SPTLC1-203ENST00000461132 MED12LQ86YW9 2145 aa1.68□□□□□ -2.14
SPTLC1-203ENST00000461132 FAM19A2Q8N3H0 131 aa1.68□□□□□ -2.14
SPTLC1-203ENST00000461132 NAA38Q9BRA0 125 aaKnown RBP1.68□□□□□ -2.14
SPTLC1-203ENST00000461132 PDCD10Q9BUL8 212 aa1.68□□□□□ -2.14
SPTLC1-203ENST00000461132 LSM2Q9Y333 95 aaKnown RBP1.68□□□□□ -2.14
SPTLC1-203ENST00000461132 TMEM2Q9UHN6 1383 aa1.68□□□□□ -2.14
SPTLC1-203ENST00000461132 UHRF1BP1LA0JNW5 1464 aa1.68□□□□□ -2.14
SPTLC1-203ENST00000461132 SYNJ1O43426 1573 aa1.68□□□□□ -2.14
SPTLC1-203ENST00000461132 STRCQ7RTU9 1775 aa1.67□□□□□ -2.14
SPTLC1-203ENST00000461132 HMCN1Q96RW7 5635 aa1.67□□□□□ -2.14
SPTLC1-203ENST00000461132 TRAV2A0A0B4J234 112 aa1.67□□□□□ -2.14
SPTLC1-203ENST00000461132 TRBV6-4A0A1B0GX49 114 aa1.67□□□□□ -2.14
SPTLC1-203ENST00000461132 A0A1W2PRS3 328 aa1.67□□□□□ -2.14
SPTLC1-203ENST00000461132 NUPR1O60356 82 aa1.67□□□□□ -2.14
SPTLC1-203ENST00000461132 MRPS14O60783 128 aaKnown RBP1.67□□□□□ -2.14
SPTLC1-203ENST00000461132 IGHV3-33P01772 117 aa1.67□□□□□ -2.14
SPTLC1-203ENST00000461132 FGF7P21781 194 aa1.67□□□□□ -2.14
SPTLC1-203ENST00000461132 MPV17LQ2QL34 196 aa1.67□□□□□ -2.14
SPTLC1-203ENST00000461132 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.67□□□□□ -2.14
SPTLC1-203ENST00000461132 LINC00299Q6ZSB3 139 aa1.67□□□□□ -2.14
SPTLC1-203ENST00000461132 PATE1Q8WXA2 126 aa1.67□□□□□ -2.14
SPTLC1-203ENST00000461132 TCEAL7Q9BRU2 100 aa1.67□□□□□ -2.14
SPTLC1-203ENST00000461132 CDC42SE1Q9NRR8 79 aa1.67□□□□□ -2.14
SPTLC1-203ENST00000461132 TMEM14CQ9P0S9 112 aa1.67□□□□□ -2.14
SPTLC1-203ENST00000461132 GRIN2AQ12879 1464 aa1.67□□□□□ -2.14
SPTLC1-203ENST00000461132 MGAMO43451 1857 aa1.67□□□□□ -2.14
SPTLC1-203ENST00000461132 PTPRGP23470 1445 aa1.66□□□□□ -2.14
SPTLC1-203ENST00000461132 FGD6Q6ZV73 1430 aa1.66□□□□□ -2.14
SPTLC1-203ENST00000461132 FREM3P0C091 2139 aa1.66□□□□□ -2.14
SPTLC1-203ENST00000461132 AKAIN1P0CW23 69 aa1.66□□□□□ -2.14
SPTLC1-203ENST00000461132 IL9P15248 144 aa1.66□□□□□ -2.14
SPTLC1-203ENST00000461132 SLC25A26Q70HW3 274 aa1.66□□□□□ -2.14
SPTLC1-203ENST00000461132 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.66□□□□□ -2.14
SPTLC1-203ENST00000461132 PLPP5Q8NEB5 264 aa1.66□□□□□ -2.14
SPTLC1-203ENST00000461132 SDF2Q99470 211 aa1.66□□□□□ -2.14
SPTLC1-203ENST00000461132 SPANXDQ9BXN6 97 aa1.66□□□□□ -2.14
SPTLC1-203ENST00000461132 ICE1Q9Y2F5 2266 aa1.65□□□□□ -2.14
SPTLC1-203ENST00000461132 PCDH15Q96QU1 1955 aa1.65□□□□□ -2.14
SPTLC1-203ENST00000461132 PLXNA3P51805 1871 aa1.65□□□□□ -2.14
SPTLC1-203ENST00000461132 TRAV12-2A0A075B6T6 113 aa1.65□□□□□ -2.15
SPTLC1-203ENST00000461132 PIGBOS1A0A0B4J2F0 54 aa1.65□□□□□ -2.15
SPTLC1-203ENST00000461132 F6UZH7 168 aa1.65□□□□□ -2.15
SPTLC1-203ENST00000461132 RNASE3P12724 160 aaKnown RBP1.65□□□□□ -2.15
SPTLC1-203ENST00000461132 ZNF25P17030 456 aaPredicted RBP1.65□□□□□ -2.15
SPTLC1-203ENST00000461132 ADCYAP1P18509 176 aa1.65□□□□□ -2.15
SPTLC1-203ENST00000461132 POLR2JP52435 117 aaKnown RBP1.65□□□□□ -2.15
SPTLC1-203ENST00000461132 DEFB103AP81534 67 aa1.65□□□□□ -2.15
SPTLC1-203ENST00000461132 RHOHQ15669 191 aa1.65□□□□□ -2.15
SPTLC1-203ENST00000461132 MEIG1Q5JSS6 88 aa1.65□□□□□ -2.15
SPTLC1-203ENST00000461132 KRTAP26-1Q6PEX3 210 aa1.65□□□□□ -2.15
SPTLC1-203ENST00000461132 UNQ5815/PRO19632Q6UWF5 114 aa1.65□□□□□ -2.15
SPTLC1-203ENST00000461132 Q6ZRN7 208 aaPredicted RBP1.65□□□□□ -2.15
SPTLC1-203ENST00000461132 ZCCHC23Q6ZST2 131 aa1.65□□□□□ -2.15
SPTLC1-203ENST00000461132 Q6ZUT4 128 aa1.65□□□□□ -2.15
SPTLC1-203ENST00000461132 DYNLRB2Q8TF09 96 aa1.65□□□□□ -2.15
SPTLC1-203ENST00000461132 DPH3Q96FX2 82 aa1.65□□□□□ -2.15
SPTLC1-203ENST00000461132 RGS12O14924 1447 aa1.65□□□□□ -2.15
SPTLC1-203ENST00000461132 BRWD1Q9NSI6 2320 aa1.65□□□□□ -2.15
SPTLC1-203ENST00000461132 LAMB4A4D0S4 1761 aa1.64□□□□□ -2.15
SPTLC1-203ENST00000461132 FN1P02751 2386 aaKnown RBP1.64□□□□□ -2.15
SPTLC1-203ENST00000461132 FREM1Q5H8C1 2179 aa1.64□□□□□ -2.15
SPTLC1-203ENST00000461132 ALPK2Q86TB3 2170 aa1.64□□□□□ -2.15
SPTLC1-203ENST00000461132 M0R129 80 aa1.64□□□□□ -2.15
SPTLC1-203ENST00000461132 DNAL4O96015 105 aa1.64□□□□□ -2.15
SPTLC1-203ENST00000461132 IGF2P01344 180 aa1.64□□□□□ -2.15
SPTLC1-203ENST00000461132 PIPP12273 146 aaPredicted RBP1.64□□□□□ -2.15
SPTLC1-203ENST00000461132 OR2T2Q6IF00 324 aa1.64□□□□□ -2.15
SPTLC1-203ENST00000461132 Q8N2B8 174 aa1.64□□□□□ -2.15
SPTLC1-203ENST00000461132 VSTM2AQ8TAG5 236 aa1.64□□□□□ -2.15
SPTLC1-203ENST00000461132 PPDPFLQ8WWR9 84 aa1.64□□□□□ -2.15
SPTLC1-203ENST00000461132 SNRNP25Q9BV90 132 aaKnown RBP1.64□□□□□ -2.15
SPTLC1-203ENST00000461132 NAA60Q9H7X0 242 aa1.64□□□□□ -2.15
SPTLC1-203ENST00000461132 BOKQ9UMX3 212 aaPredicted RBP1.64□□□□□ -2.15
SPTLC1-203ENST00000461132 TMEM30CPA0ZSE6 113 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms