RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 NBASA2RRP1 2371 aa7.83□□□□□ -1.16
UFD1-205ENST00000459854 H3BT86 120 aa7.83□□□□□ -1.16
UFD1-205ENST00000459854 FXYD7P58549 80 aa7.83□□□□□ -1.16
UFD1-205ENST00000459854 SS18Q15532 418 aa7.83□□□□□ -1.16
UFD1-205ENST00000459854 ZNF114Q8NC26 417 aa7.83□□□□□ -1.16
UFD1-205ENST00000459854 CCL3L1P16619 93 aa7.82□□□□□ -1.16
UFD1-205ENST00000459854 ZNF493Q6ZR52 646 aa7.82□□□□□ -1.16
UFD1-205ENST00000459854 ZNF843Q8N446 348 aa7.82□□□□□ -1.16
UFD1-205ENST00000459854 FAM215AQ9Y5M1 114 aa7.82□□□□□ -1.16
UFD1-205ENST00000459854 S4R3C0 116 aa7.82□□□□□ -1.16
UFD1-205ENST00000459854 XIRP2A4UGR9 3374 aa7.82□□□□□ -1.16
UFD1-205ENST00000459854 A0A0U1RRA0 63 aa7.82□□□□□ -1.16
UFD1-205ENST00000459854 RHOHQ15669 191 aa7.82□□□□□ -1.16
UFD1-205ENST00000459854 IGFBPL1Q8WX77 278 aa7.82□□□□□ -1.16
UFD1-205ENST00000459854 DOCK10Q96BY6 2186 aa7.82□□□□□ -1.16
UFD1-205ENST00000459854 CHD8Q9HCK8 2581 aa7.82□□□□□ -1.16
UFD1-205ENST00000459854 LTAP01374 205 aa7.81□□□□□ -1.16
UFD1-205ENST00000459854 LMO1P25800 156 aa7.81□□□□□ -1.16
UFD1-205ENST00000459854 ANKRD39Q53RE8 183 aa7.81□□□□□ -1.16
UFD1-205ENST00000459854 LINC01560Q8TB33 94 aa7.81□□□□□ -1.16
UFD1-205ENST00000459854 CYYR1Q96J86 154 aa7.81□□□□□ -1.16
UFD1-205ENST00000459854 TMEM213A2RRL7 107 aa7.81□□□□□ -1.16
UFD1-205ENST00000459854 MORN5Q5VZ52 161 aa7.81□□□□□ -1.16
UFD1-205ENST00000459854 ZNF474Q6S9Z5 364 aaPredicted RBP7.81□□□□□ -1.16
UFD1-205ENST00000459854 TRAV3A0A0B4J244 114 aa7.81□□□□□ -1.16
UFD1-205ENST00000459854 IGHV1-3A0A0C4DH29 117 aa7.81□□□□□ -1.16
UFD1-205ENST00000459854 SRRM4A7MD48 611 aaKnown RBP7.81□□□□□ -1.16
UFD1-205ENST00000459854 H0YGX0 51 aa7.81□□□□□ -1.16
UFD1-205ENST00000459854 LY6EQ16553 131 aa7.81□□□□□ -1.16
UFD1-205ENST00000459854 SIGLEC9Q9Y336 463 aa7.81□□□□□ -1.16
UFD1-205ENST00000459854 ZNF407Q9C0G0 2248 aa7.81□□□□□ -1.16
UFD1-205ENST00000459854 TRIOO75962 3097 aa7.81□□□□□ -1.16
UFD1-205ENST00000459854 K7ERJ3 54 aa7.81□□□□□ -1.16
UFD1-205ENST00000459854 PSPNO60542 156 aa7.81□□□□□ -1.16
UFD1-205ENST00000459854 SAP30O75446 220 aa7.81□□□□□ -1.16
UFD1-205ENST00000459854 IGHV1-8P0DP01 117 aa7.81□□□□□ -1.16
UFD1-205ENST00000459854 CDPF1Q6NVV7 123 aa7.81□□□□□ -1.16
UFD1-205ENST00000459854 PRSS57Q6UWY2 283 aa7.81□□□□□ -1.16
UFD1-205ENST00000459854 THAP8Q8NA92 274 aa7.81□□□□□ -1.16
UFD1-205ENST00000459854 TRAV41A0A0B4J266 112 aa7.8□□□□□ -1.16
UFD1-205ENST00000459854 HERVK_113P63121 156 aa7.8□□□□□ -1.16
UFD1-205ENST00000459854 HERV-K104P63124 156 aa7.8□□□□□ -1.16
UFD1-205ENST00000459854 REV3LO60673 3130 aa7.8□□□□□ -1.16
UFD1-205ENST00000459854 TRBV25-1A0A075B6N4 114 aa7.8□□□□□ -1.16
UFD1-205ENST00000459854 PRSS29PA6NIE9 313 aa7.8□□□□□ -1.16
UFD1-205ENST00000459854 M0R1W7 72 aa7.8□□□□□ -1.16
UFD1-205ENST00000459854 AMTNQ6UX39 209 aa7.8□□□□□ -1.16
UFD1-205ENST00000459854 HAMPP81172 84 aa7.8□□□□□ -1.16
UFD1-205ENST00000459854 NDUFA4L2Q9NRX3 87 aa7.8□□□□□ -1.16
UFD1-205ENST00000459854 F6UB75 175 aa7.8□□□□□ -1.16
UFD1-205ENST00000459854 C5orf64Q2M2E5 130 aa7.8□□□□□ -1.16
UFD1-205ENST00000459854 FGFBP3Q8TAT2 258 aa7.8□□□□□ -1.16
UFD1-205ENST00000459854 C1orf147Q96MC9 270 aaPredicted RBP7.8□□□□□ -1.16
UFD1-205ENST00000459854 C15orf32Q32M92 178 aa7.79□□□□□ -1.16
UFD1-205ENST00000459854 TRAV12-1A0A0B4J245 112 aa7.79□□□□□ -1.16
UFD1-205ENST00000459854 FHL1Q13642 323 aa7.79□□□□□ -1.16
UFD1-205ENST00000459854 ZNF625Q96I27 306 aaPredicted RBP7.79□□□□□ -1.16
UFD1-205ENST00000459854 LINC00479Q96M42 142 aa7.79□□□□□ -1.16
UFD1-205ENST00000459854 PRR25Q96S07 402 aa7.79□□□□□ -1.16
UFD1-205ENST00000459854 PRSS22Q9GZN4 317 aa7.79□□□□□ -1.16
UFD1-205ENST00000459854 PIFOQ8TCI5 191 aa7.79□□□□□ -1.16
UFD1-205ENST00000459854 TRAV13-1A0A0B4J241 112 aa7.79□□□□□ -1.16
UFD1-205ENST00000459854 BAALC-AS2P0C853 105 aa7.79□□□□□ -1.16
UFD1-205ENST00000459854 PRR20EP86478 221 aa7.79□□□□□ -1.16
UFD1-205ENST00000459854 PRR20CP86479 221 aa7.79□□□□□ -1.16
UFD1-205ENST00000459854 PRR20DP86480 221 aa7.79□□□□□ -1.16
UFD1-205ENST00000459854 PRR20BP86481 221 aa7.79□□□□□ -1.16
UFD1-205ENST00000459854 PRR20AP86496 221 aa7.79□□□□□ -1.16
UFD1-205ENST00000459854 LCNL1Q6ZST4 164 aa7.79□□□□□ -1.16
UFD1-205ENST00000459854 CD177Q8N6Q3 437 aa7.79□□□□□ -1.16
UFD1-205ENST00000459854 ORMDL1Q9P0S3 153 aa7.79□□□□□ -1.16
UFD1-205ENST00000459854 MED12Q93074 2177 aa7.79□□□□□ -1.16
UFD1-205ENST00000459854 hADV29S1A0JD25 119 aa7.78□□□□□ -1.16
UFD1-205ENST00000459854 HOXD3P31249 432 aaPredicted RBP7.78□□□□□ -1.16
UFD1-205ENST00000459854 LENEPQ9Y5L5 61 aa7.78□□□□□ -1.16
UFD1-205ENST00000459854 INSP01308 110 aa7.78□□□□□ -1.16
UFD1-205ENST00000459854 FAM201AQ5SY85 155 aa7.78□□□□□ -1.16
UFD1-205ENST00000459854 Q8TAT8 98 aa7.78□□□□□ -1.16
UFD1-205ENST00000459854 MRPL53Q96EL3 112 aaKnown RBP7.78□□□□□ -1.16
UFD1-205ENST00000459854 MYO7BQ6PIF6 2116 aa7.78□□□□□ -1.16
UFD1-205ENST00000459854 CACNA1AO00555 2505 aa7.78□□□□□ -1.16
UFD1-205ENST00000459854 TRBV10-2A0A0K0K1G8 114 aa7.78□□□□□ -1.16
UFD1-205ENST00000459854 H3BRN7 92 aa7.78□□□□□ -1.16
UFD1-205ENST00000459854 IGHV1-46P01743 117 aa7.78□□□□□ -1.16
UFD1-205ENST00000459854 CELA3BP08861 270 aa7.78□□□□□ -1.16
UFD1-205ENST00000459854 LINC01620Q4KN68 170 aa7.78□□□□□ -1.16
UFD1-205ENST00000459854 SH2D6Q7Z4S9 175 aa7.78□□□□□ -1.16
UFD1-205ENST00000459854 ZNF524Q96C55 264 aa7.78□□□□□ -1.16
UFD1-205ENST00000459854 IGHV1-18A0A0C4DH31 117 aa7.78□□□□□ -1.16
UFD1-205ENST00000459854 FAM236AA0A1B0GUQ0 79 aa7.78□□□□□ -1.16
UFD1-205ENST00000459854 FAM236BA0A1B0GV22 79 aa7.78□□□□□ -1.16
UFD1-205ENST00000459854 RBAKDNA6NC62 111 aa7.77□□□□□ -1.16
UFD1-205ENST00000459854 UQCRQO14949 82 aa7.77□□□□□ -1.16
UFD1-205ENST00000459854 BSPH1Q075Z2 132 aa7.77□□□□□ -1.16
UFD1-205ENST00000459854 COLCA1Q6ZS62 124 aa7.77□□□□□ -1.16
UFD1-205ENST00000459854 LINC00643Q86TS7 51 aa7.77□□□□□ -1.16
UFD1-205ENST00000459854 DPH3Q96FX2 82 aa7.77□□□□□ -1.16
UFD1-205ENST00000459854 SPTBN5Q9NRC6 3674 aaKnown RBP7.77□□□□□ -1.17
UFD1-205ENST00000459854 IGKV1-6A0A0C4DH72 117 aa7.77□□□□□ -1.17
UFD1-205ENST00000459854 A0A1B0GX51 115 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms