RNA–Protein interactions for RNA: ENST00000459004.1

SCARNA18-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 134 nt, Biotype snoRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18-201ENST00000459004 USP9YO00507 2555 aaPredicted RBP-0.3□□□□□ -2.46
SCARNA18-201ENST00000459004 PKHD1P08F94 4074 aa-0.3□□□□□ -2.46
SCARNA18-201ENST00000459004 JMJD1CQ15652 2540 aa-0.3□□□□□ -2.46
SCARNA18-201ENST00000459004 ANK2Q01484 3957 aa-0.3□□□□□ -2.46
SCARNA18-201ENST00000459004 PTPN13Q12923 2485 aa-0.3□□□□□ -2.46
SCARNA18-201ENST00000459004 REEP5Q00765 189 aa-0.3□□□□□ -2.46
SCARNA18-201ENST00000459004 FADDQ13158 208 aa-0.3□□□□□ -2.46
SCARNA18-201ENST00000459004 SNCBQ16143 134 aa-0.3□□□□□ -2.46
SCARNA18-201ENST00000459004 Q5BKY6 102 aa-0.3□□□□□ -2.46
SCARNA18-201ENST00000459004 OR4C12Q96R67 309 aa-0.3□□□□□ -2.46
SCARNA18-201ENST00000459004 SH3BGRL3Q9H299 93 aa-0.3□□□□□ -2.46
SCARNA18-201ENST00000459004 LYRM2Q9NU23 88 aaPredicted RBP-0.3□□□□□ -2.46
SCARNA18-201ENST00000459004 SSR3Q9UNL2 185 aa-0.3□□□□□ -2.46
SCARNA18-201ENST00000459004 MYO15AQ9UKN7 3530 aa-0.3□□□□□ -2.46
SCARNA18-201ENST00000459004 ANKRD11Q6UB99 2663 aaPredicted RBP-0.3□□□□□ -2.46
SCARNA18-201ENST00000459004 TACC2O95359 2948 aa-0.3□□□□□ -2.46
SCARNA18-201ENST00000459004 CHD7Q9P2D1 2997 aa-0.3□□□□□ -2.46
SCARNA18-201ENST00000459004 DNAH17Q9UFH2 4485 aa-0.3□□□□□ -2.46
SCARNA18-201ENST00000459004 SPTBP11277 2137 aa-0.31□□□□□ -2.46
SCARNA18-201ENST00000459004 PKHD1L1Q86WI1 4243 aa-0.31□□□□□ -2.46
SCARNA18-201ENST00000459004 PIEZO1Q92508 2521 aa-0.31□□□□□ -2.46
SCARNA18-201ENST00000459004 CST7O76096 145 aa-0.31□□□□□ -2.46
SCARNA18-201ENST00000459004 GYPBP06028 91 aa-0.31□□□□□ -2.46
SCARNA18-201ENST00000459004 NUP35Q8NFH5 326 aa-0.31□□□□□ -2.46
SCARNA18-201ENST00000459004 DGCR14Q96DF8 476 aaKnown RBP-0.31□□□□□ -2.46
SCARNA18-201ENST00000459004 PBDC1Q9BVG4 233 aa-0.31□□□□□ -2.46
SCARNA18-201ENST00000459004 RTL8AQ9BWD3 113 aa-0.31□□□□□ -2.46
SCARNA18-201ENST00000459004 FLNAP21333 2647 aaKnown RBP-0.31□□□□□ -2.46
SCARNA18-201ENST00000459004 ALMS1Q8TCU4 4167 aa-0.31□□□□□ -2.46
SCARNA18-201ENST00000459004 DNAH6Q9C0G6 4158 aa-0.31□□□□□ -2.46
SCARNA18-201ENST00000459004 CSMD2Q7Z408 3487 aa-0.31□□□□□ -2.46
SCARNA18-201ENST00000459004 DMXL2Q8TDJ6 3036 aa-0.31□□□□□ -2.46
SCARNA18-201ENST00000459004 USP54Q70EL1 1684 aa-0.31□□□□□ -2.46
SCARNA18-201ENST00000459004 CFAP46Q8IYW2 2715 aa-0.31□□□□□ -2.46
SCARNA18-201ENST00000459004 VPS13BQ7Z7G8 4022 aa-0.31□□□□□ -2.46
SCARNA18-201ENST00000459004 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.32□□□□□ -2.46
SCARNA18-201ENST00000459004 NIPBLQ6KC79 2804 aaeCLIP-0.32□□□□□ -2.46
SCARNA18-201ENST00000459004 EPG5Q9HCE0 2579 aa-0.32□□□□□ -2.46
SCARNA18-201ENST00000459004 DSPPQ9NZW4 1301 aa-0.32□□□□□ -2.46
SCARNA18-201ENST00000459004 CSMD3Q7Z407 3707 aa-0.32□□□□□ -2.46
SCARNA18-201ENST00000459004 MT-ND6P03923 174 aa-0.32□□□□□ -2.46
SCARNA18-201ENST00000459004 FABP4P15090 132 aa-0.32□□□□□ -2.46
SCARNA18-201ENST00000459004 MRPS36P82909 103 aaKnown RBP-0.32□□□□□ -2.46
SCARNA18-201ENST00000459004 TMED2Q15363 201 aa-0.32□□□□□ -2.46
SCARNA18-201ENST00000459004 NEK7Q8TDX7 302 aa-0.32□□□□□ -2.46
SCARNA18-201ENST00000459004 LINC00208Q96KT6 92 aa-0.32□□□□□ -2.46
SCARNA18-201ENST00000459004 MCEEQ96PE7 176 aa-0.32□□□□□ -2.46
SCARNA18-201ENST00000459004 MRPL35Q9NZE8 188 aaKnown RBP-0.32□□□□□ -2.46
SCARNA18-201ENST00000459004 MGAM2Q2M2H8 2515 aa-0.32□□□□□ -2.46
SCARNA18-201ENST00000459004 ITPR3Q14573 2671 aa-0.32□□□□□ -2.46
SCARNA18-201ENST00000459004 MXRA5Q9NR99 2828 aa-0.32□□□□□ -2.46
SCARNA18-201ENST00000459004 KALRNO60229 2985 aa-0.33□□□□□ -2.46
SCARNA18-201ENST00000459004 DMBT1Q9UGM3 2413 aaPredicted RBP-0.33□□□□□ -2.46
SCARNA18-201ENST00000459004 DNAH11Q96DT5 4516 aa-0.33□□□□□ -2.46
SCARNA18-201ENST00000459004 TPRP12270 2363 aaKnown RBP-0.33□□□□□ -2.46
SCARNA18-201ENST00000459004 HSD11B1P28845 292 aa-0.33□□□□□ -2.46
SCARNA18-201ENST00000459004 PPP1R2P41236 205 aa-0.33□□□□□ -2.46
SCARNA18-201ENST00000459004 SNRPD3P62318 126 aaKnown RBP-0.33□□□□□ -2.46
SCARNA18-201ENST00000459004 FXYD3Q14802 87 aa-0.33□□□□□ -2.46
SCARNA18-201ENST00000459004 ZNF56Q15929 161 aa-0.33□□□□□ -2.46
SCARNA18-201ENST00000459004 KRTAP19-8Q3LI54 63 aa-0.33□□□□□ -2.46
SCARNA18-201ENST00000459004 KRTAP19-6Q3LI70 58 aa-0.33□□□□□ -2.46
SCARNA18-201ENST00000459004 HACD4Q5VWC8 232 aa-0.33□□□□□ -2.46
SCARNA18-201ENST00000459004 DHRS4L2Q6PKH6 230 aa-0.33□□□□□ -2.46
SCARNA18-201ENST00000459004 CCL4L1Q8NHW4 92 aa-0.33□□□□□ -2.46
SCARNA18-201ENST00000459004 ATG2AQ2TAZ0 1938 aa-0.33□□□□□ -2.46
SCARNA18-201ENST00000459004 DNAH8Q96JB1 4490 aa-0.33□□□□□ -2.46
SCARNA18-201ENST00000459004 DNAH3Q8TD57 4116 aa-0.33□□□□□ -2.46
SCARNA18-201ENST00000459004 ATRQ13535 2644 aa-0.34□□□□□ -2.46
SCARNA18-201ENST00000459004 A0A0C4DFX4 3053 aa-0.34□□□□□ -2.46
SCARNA18-201ENST00000459004 DNAH9Q9NYC9 4486 aa-0.34□□□□□ -2.46
SCARNA18-201ENST00000459004 C3orf85A0A1B0GTC6 90 aa-0.34□□□□□ -2.46
SCARNA18-201ENST00000459004 RTL8BQ17RB0 113 aa-0.34□□□□□ -2.46
SCARNA18-201ENST00000459004 IZUMO2Q6UXV1 221 aa-0.34□□□□□ -2.46
SCARNA18-201ENST00000459004 DEFB132Q7Z7B7 95 aa-0.34□□□□□ -2.46
SCARNA18-201ENST00000459004 C5orf56Q8N8D9 126 aa-0.34□□□□□ -2.46
SCARNA18-201ENST00000459004 OR5AK2Q8NH90 309 aa-0.34□□□□□ -2.46
SCARNA18-201ENST00000459004 ANK1P16157 1881 aa-0.35□□□□□ -2.46
SCARNA18-201ENST00000459004 CACNA1HO95180 2353 aa-0.35□□□□□ -2.47
SCARNA18-201ENST00000459004 EYSQ5T1H1 3165 aa-0.35□□□□□ -2.47
SCARNA18-201ENST00000459004 CEP295Q9C0D2 2601 aa-0.35□□□□□ -2.47
SCARNA18-201ENST00000459004 NBDYA0A0U1RRE5 68 aa-0.35□□□□□ -2.47
SCARNA18-201ENST00000459004 A0A1W2PRS3 328 aa-0.35□□□□□ -2.47
SCARNA18-201ENST00000459004 KPNA4O00629 521 aaPredicted RBP-0.35□□□□□ -2.47
SCARNA18-201ENST00000459004 TRACP01848 142 aa-0.35□□□□□ -2.47
SCARNA18-201ENST00000459004 CSN2P05814 226 aa-0.35□□□□□ -2.47
SCARNA18-201ENST00000459004 CAPZBP47756 277 aa-0.35□□□□□ -2.47
SCARNA18-201ENST00000459004 MRPS25P82663 173 aaKnown RBP-0.35□□□□□ -2.47
SCARNA18-201ENST00000459004 CSAG1Q6PB30 78 aa-0.35□□□□□ -2.47
SCARNA18-201ENST00000459004 VMO1Q7Z5L0 202 aa-0.35□□□□□ -2.47
SCARNA18-201ENST00000459004 CROCCP2Q86T23 111 aa-0.35□□□□□ -2.47
SCARNA18-201ENST00000459004 SREK1IP1Q8N9Q2 155 aaPredicted RBP-0.35□□□□□ -2.47
SCARNA18-201ENST00000459004 OR4B1Q8NGF8 309 aa-0.35□□□□□ -2.47
SCARNA18-201ENST00000459004 OR13C6PQ8NH95 151 aa-0.35□□□□□ -2.47
SCARNA18-201ENST00000459004 CEP19Q96LK0 163 aa-0.35□□□□□ -2.47
SCARNA18-201ENST00000459004 CIB3Q96Q77 187 aaPredicted RBP-0.35□□□□□ -2.47
SCARNA18-201ENST00000459004 GINS3Q9BRX5 216 aa-0.35□□□□□ -2.47
SCARNA18-201ENST00000459004 SS18L2Q9UHA2 77 aa-0.35□□□□□ -2.47
SCARNA18-201ENST00000459004 MAP1BP46821 2468 aaKnown RBP-0.35□□□□□ -2.47
SCARNA18-201ENST00000459004 DCHS1Q96JQ0 3298 aa-0.35□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms